Basic Information

Insect: Dilophus febrilis
Gene Symbol: salm_2
Assembly: GCA_958336335.1
Location: OY284471.1:1460881-1476300[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.9e-06 0.00022 21.9 1.0 1 23 604 626 604 626 0.98

2 9 2.8e-05 0.0016 19.2 2.1 1 23 632 654 632 654 0.98

3 9 0.24 14 6.8 3.2 2 23 1202 1223 1202 1223 0.97

4 9 2.5e-07 1.5e-05 25.6 1.2 1 23 1229 1251 1229 1251 0.98

5 9 0.013 0.73 10.8 3.9 1 23 1261 1283 1261 1283 0.97

6 9 0.074 4.3 8.4 2.9 2 23 1740 1761 1739 1761 0.97

7 9 3.1e-06 0.00018 22.2 0.8 1 23 1767 1789 1767 1789 0.99

8 9 8.1e-05 0.0047 17.7 6.4 1 23 2207 2229 2207 2229 0.96

9 9 1.7e-06 9.7e-05 23.0 0.2 1 23 2235 2257 2235 2257 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.9e-06	0.00022	21.9	1.0	1	23	604	626	604	626	0.98
2	9	2.8e-05	0.0016	19.2	2.1	1	23	632	654	632	654	0.98
3	9	0.24	14	6.8	3.2	2	23	1202	1223	1202	1223	0.97
4	9	2.5e-07	1.5e-05	25.6	1.2	1	23	1229	1251	1229	1251	0.98
5	9	0.013	0.73	10.8	3.9	1	23	1261	1283	1261	1283	0.97
6	9	0.074	4.3	8.4	2.9	2	23	1740	1761	1739	1761	0.97
7	9	3.1e-06	0.00018	22.2	0.8	1	23	1767	1789	1767	1789	0.99
8	9	8.1e-05	0.0047	17.7	6.4	1	23	2207	2229	2207	2229	0.96
9	9	1.7e-06	9.7e-05	23.0	0.2	1	23	2235	2257	2235	2257	0.97

Sequence Information

Coding Sequence: ATGTCACATACTACTGATATATGCCGTGgacGTGATAGCACAAGTTCATGTTCTGAAGAAGATGTTTTATTAACATCAACAGAATTAAATAGTAGTTTAAGTGAAGAACAATGTCACGATGATGAGGAACTATTCGAAGATGAACATTGtgatattttatcaaatcataataataataataataataatattgatgcaaatgtgaataaaaataatattgataataataataccaataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataatagtaataatttaaatcgTATGGAAAATAatgtacatttaaaaatgGATTCAATGGATATGGAagatggtggtggtggtggtgatgatggtgACGATGgtgataataatgataatacggaaacaattaaagaaaaatctacagaaaataataattctgctgataataatgaaaatattacagTTAACAATGGAAATTCAGATACATTTGATGATAAAGAAAATGGTAATCATAATCAAAATGATGACAATGAAATGGAATGCAATACGAATGAAAAGACTTTAggaaaaaataatgaattaattaataataataaaagtcaaaataatcaaaataataataataataataataataataataataataataataataataataataataataataataataataatagtgaaaAAGACAAAAATGAAGCAAAATCGGATTTTGAGTGTCCCAATACAGCTAATTTTCTTAGTGCAAATGCCGAATCTTTAGAAAAGTTACAAAATCTTACACATCAGGTAGCGACAGCATTAACAACTCCTATTAATGAAGCGGATCAAAATCGTTTAAATGAATGGCATGCAACGTTACTTACATTACAAGAACAGCATCAACATTTTCTACGTATACAATTACTTCAAGGATTACAATCGAATTTAAAGGGAAACCAAATGGATGATAAAagtagtagtaataataataataacaataatcataataatggTGATATTGAAGAGGATGAACATAATTGTGGTGATGaaaatgttgatgatgaaaatgaatttcGTGGGAATTTTCAGAAGCGTATCAGTTCGTGTGACAATAACGTCGACGataacgatgatgatgatgatgatgatgtggaCGACGGCGATATTGATGGTGAGGCAGATGTTGATGACATGGATGATGATATAATACCACCAAATCATATGTATCCAAAAAATGCTGAACGTGAAGAGGGTGAATTGACTGAAGAGCAAATGGAAGAGGCCCGTCGAATTTACCAAGAACAtcgtaaattatattatagaaatgaGGAAATGCGTAGAACACAATTAATGAATGACATATTAGGAAATGATAAATCTGGATCAaataatgaattgaaaaaagtTATAACATCACCATCATCAACGGGTGCTGCTTTGGGTGCTGGTGGTGGTAACAATGCAGCAAACACACCAGTCAATTCAACGTCGGCATTGGCATCTCTCAGTAGTGCAATAATGTCATTGGAATCATCATTTGGTTCATCGTTTGTGTCCAATATAATAACAGATCATGATCAGCCATCATCAATGGATGGTTTAAATTCATTGGAAATGTTACAGAAAACCACTGAAGAAGTACTGGACTCAGCCTCACGCGGTATACTATCCGGTGGGTTAACCGATGAAATGTCATTTAAAAACGATGGTAAAGGTAGAAATGAACCGTTTTTTAAACATCGTTGTAAATATTGTGGTAAAGTATTTGGTTCTGATTCAGCGTTACAAATTCATATACGATCTCATACCGGCGAACGTCCATTCAAATGTAATGTTTGTGGTAGTCGTTTTACAACAAAGGGTAATCTCAAAGTACATTTCCAAAGACATACACAAAAGTATCCGGATGTGTTAATGAATCCAAATCCAATACCCGAGCATTTAGATGGATTGTACCCATCGATATTGCCACCGTTGGCCTCTGGTCAACCTCAGCCATTATCACCACCTTTACCAACATCTTCATCATCGGTAAGGTCCATGGCACCGCCGAAAACATCTGCAAATAcctcaacaacaacaacaacaacaacaacaacagcaaccCCATCGACGTCATCCTTACGACAACATTTACATTCAGGACAATCGTCTAGAATACCATCGAGCAGTAATATCCAAAACAActcacaacaacaacacaaccTCCACCATAATCCGCATCAGCAACAATCACCACAACATCAGCAACAACAAACAACATCAAAATCTCAAACCCATTCATTGGCATCGCATATACATTCTTCACAATTGCCACCAATGGgatcagcatcatcatcattacaATCGCAAACACAAGAACAATTAACGATAGCTGCATTGCAAAAGCAACGTCTGCCGAATTCAGCCAATATGTTTGGATTATCGTCAGATGTTAATGATATACATGGAATTCATAATTATCGGGGTTTACCATTTTTACCGCTACCATTTGATCTATTAAAACAAATGGGACAATTACCATTCTTTAATGCAGCAATGCGAGAAATGCTccaacagcagcagcagcagcagcagcagcaataccagcaacaacaacaacaacatcatgATCAAGAAACACAGCACGAACAAGATAAACCGGCTGATCTTAGTAAACCGATGGCATCTCGTTCGTCATCAATTAAAGATGAAATAAAAGATGAACCAATAAGTCCTCGGTCATCAATGGACAATGATGATGTTGATCGTTTATCATCATCCGATATAAACCCAATTGAGAGACGATCAGCAAATGAAAATGATGTGAATGCAAAAAGGAAATCACCGATATCCGCTAGTGATTTGAATGCGGCCGGCGCTAAAAAGTTCATGtgtaataattacaataaagaTGATGACAATTCAGCGATAAAAAGTATTGAAGACTTACGTTTAACATCATCACCACACTCATCCAATACTATTACACGACCGCCACCCACAttatcatcttcatcatcaatACATAACCAGAGTCATAATAATCAACAACCATATCCTTATAATCATCATTATCCTCCTCCTCATCACCACCCACAAAATCcccatcatcatcttcatcagcaactacaacaacaacaacaacaacagcagcagcagcagcatcaGCAGTCTTCACATCATCCGCATAATAGAGATCTAacagaaaattcatcaaaaatatcACCCacatcatcttcatcgtccGTACATCAATCGTCGTccttaaataataaattatcaccCAGAGAATTCCATCATTTACCATCACCATTTCAcgatcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacatcaacaacaattagcacatgaaatgaaaatttttccaCCAATGTTACCACGACCTGGCAGTTCTGATAATTCCTGGGAAAGTTACATTGAAGTAGATAAATCATCATCGGAAACAAGTAAGCTACAACAATTTGttgataatattgaaaataaaataactgaTCCAAATGAATGTGTTGTTTGTCATAAAGTGTTATCTTGTCGTAGTGCATTGCAAATGCATTATCGGACACATACTGGCGAACGACCATTTCGTTGTAAACTATGTGGACGTGCATTTACAACAAAGGgtaatttaaaaacacatatgAGTGTGCATCGTATGAAACCGCCGATGCGTACCATTCATCAGTGTACGGTGtgtcataaaaaatatacgaatTCATTGGTGTTGGAACAACACGTTCGATTGCATACCGGAGCCCAAACAGATTTAACTATCGATCAAATTAATGCAGCTGAATTACGTGATTATGGATTGCGACCCAGTGGTTTTCCAATGGGTATGCCATATAGTCTACCACTGTCTTTTCACGGTATGGGTGGTACAGTAGAAGGAAGTGGTATGAGTATGGGCGGTGGTTGCAATGAATCATTCGATGGAAACGATGATTACATGGATGaagattttgatgatgaaattaattttgatgatgaaatgTCAAATGGTAATTCACTGTCGAGTGATTCAAATCAAAACATATCGTCAAATTGTACTAAatctaatattaataataataataataatcaaaataatcaaaCTAATAGTTTAAGtgataatagtaataataatcttaatgataataataataatattgataatcacaataataatagtagtgataataatattaataaccatagaaataatacaaatactaatAGTGATGAAATCAATTTACGTTTAGTAATGAATGCATCACCAGTGTTAATTGATggtataaaaaatgaaaatctatcACGTTCATCAACGCCAGCTAGTCATTTAGAAGAAGAGCATGAGCCACATGGAAAACAATCATCAATGTCTGAAACACCATCACCGTTATCAGCCTCACAAATAACAATATCAACGCCAGTAAGACCCACATCAAGAACAACCACCATCAccccaacaacaacaacaacaacaacaacagcagcagcagcattAAGCACAACAACTACACCACCATCTTCTATTTTAACATTGAAATCACCTTCGTTTGGGACCGAACAATCATCGCGACCATTATCCAATACAGCGCTAATACCATTATCTTCACCGGCATCATCAGTAGCCTCATCGTCGTTACATCCATCACCATCACCGGGTTCGTCTGACTTATGCCAAGGTGCATTAGATTTAACACCACGTTCATCATCATCAGAATTAAAATCAAGTCCACGTAATATTTTATCACATGCATTACCATCCCAACACCACcaacaaccacaaccacaacaacaacaacaacaacaacaaccaccacAACTAAATCAACATTCAACAAGATCAACACCACCATCACCACATCCAAATTCACAACAAAAGTTACAAGGTGGATTACCATGTCTTCCTGCAACTTTTCCACCGTTTCCTAATTTTGCATTTATACATCATTCACATCAGGCAGCCGTTGCGGCCGCAGCAGCCGCAGCAGCTGTAgcatcatcatcctcatcatcatcggcATCATCACCAATGATGGTGGCATCGGCAGCATTAAATAATTTGGTACAATCGGTTTCACCAATGGGAGGATCATATCCCATGTCATTACCAGGTGTACGAGGTAATACAACGTGTTCAATTTGTGTTAAACACTTTGCATGCCAATCGGCACTGGAAATTCACTATCGCAGTCATACCAAAGAAAGGCCATTTAAATGTGGTCTTTGTCCTAAAGCGTTTACGACAAAGGGCAATATGAAACAACATTTAATGACACATAAACTACGTGATAATGCAACGTTAAGATTATCGAAATCAccatcattattatcatctGATGGTGGTGCTTCCAATTTATCAACAGATTCATTAAAAGAACAACGCAATTATAAACAACTAATGCGTGAACACCAATTACGTAATATTTCGGAATCAGAATTAAGTCCGCGATCAAATGAAAATAGTAGTAAAGGCAGTGCTTCATCGTCAAATTTAGATCTTAATATGCAATATCAAttatatcaacaacaacaacaacaacaactacaacaaaatatattaagttttcaaaataacaacaataataaaagtaaCTTAAACAacaatggtaataataataataatatggaacGTCGTGAACGTTCTCAACAACAACTAcagtcatcatcatcatcatcacaattCCAACaagaaacaaattttcaaaatatgttaTTGGATCGTCAAAGACtgcatcaacaacaacaacaacaacaatcacaaaGTTCACAATCAAATAAAAGTGAAACACATAAAAGTCGTTCAATGTCACCAAATTTAGATTTAGAACaacaatcaaataataattcgAAATTAACAAATgTGTCTGAATCTCAAGAATCATCGACAAATCTAAAAGATAATGCTTCTTTTAATATACCATCACAACCATTACCGCCGATAACATCACCATCATCTCAATCGTCAATATTACTGTCACAATCATTatcagcagcagcaacatCACAATCAAAACAGCAACAACATCGATCACCatcaacaccaccaccacatcCACATCACCACCCAAaccaacatcatcatcaacaatcATCTAAATTATCTTCAGTACGTTCCATTCGATCATTGTCATCGTCATCGTCCAGGACACCATCACCAGCGCCACTACCACCGCCAACACTATTACAAATGCCATCAGTTTCACCCTCTTTACAGCAACCTCAACAATTTAAATCCTCTTCCATATCACATTCACAATCATCAAATTTATCCTTACCCATATTACCACCATCATCACAATTATCACCTccacaaccaccaccaccatcatcatcatcacaattaTTTGTATCGTCCGGTGCGGCTTTATCATATCCAGAGGAAAAAACAGCATCTCATTTAGAACGTTTACAACAATTTCATACAAATTCATTGATGATTCAACCGTTGAAAATGGAAGTGCAACAATTAAAACAAGCCGTATTGGATGGTAATGGTGGTACCGGCGATAACGGTTCAGGTGATCAAAAACATTTCTGTCATTTGTGTCAGAAAAATTTCAGTTCAACATCATCATTACAAATTCATATGCGAACGCATACCGGCGAACGTCCGTTTGTTTGTTCGGTTTGTCAAAAGGCATTTACAACCAAAGGAAATTTAAAGGTCCACATGGGTATTCACACTTGGAGTGGAACTTCACGACGCGGTCGTCGAATGTCACTGGAGCTACCATTTAATGGGGCTATGCCATTAATGTTACAAAGTCATCCAGACTTTTTGCAACGTCATCCCGAATTTTATCATCCATATCTACCCAATCATATTCTAGGACGTATGCAACCATCAATGAATTTTGAGCAACAACAATTGCACcatcatcaacaacagcaacagttacataaacattttgaCAGCAGGGGGGCACCACTATCATTACCATCTTTACCGCCACAATCACTAccattatcttcatcatcaacatcaacatcatccGCATTAACAGTAACACAATCCGGAGCAAATCAAtcttcttcttcatcatcatcgtcatcaacAAGTGCATTCCCATCGGCTTCAACAAGCTTGGTTAAtaattcatcatcaacaaataaatatcattcAAATACAAATGGTTTATTGAATTATTCAAATGCATTTTCCGAtcgttttaatttatttgcgCAAGCAGAACTATTAAGACAATCATCCACAAcgacatcatcatcatcatcatcatcagcatcaccACAATcacaacaaatacaacaattaCATTCAGCATACATTAACAATGCCGCCGATGATTTAACACCTTCGCCATCAAACAGTAACGTTGATGCAGATTGTGCAATGGAATCACTAAAACATAACGGTGGCGGTGGTGGTCGTGATCATCATTCAATgtcaccatcatcatcatcaccaccatcatcatcatcaccaccatcatcaGCATCACCATTATCATTACGTGCTCGTCCAATCGTTAAAGGATCAAATTCACCAGATTCCATACCACCAAAATTGTGGAAATTACATTTAGAAAGTCAAACATTATTGAAAACCAAccaaaccaataataataataatacaaatagtgattcaattaatttaagtCAAACAAAAAGTGATGTAAAATCAACCACTGAAGAAttattaacataa
Protein Sequence: MSHTTDICRGRDSTSSCSEEDVLLTSTELNSSLSEEQCHDDEELFEDEHCDILSNHNNNNNNNIDANVNKNNIDNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNLNRMENNVHLKMDSMDMEDGGGGGDDGDDGDNNDNTETIKEKSTENNNSADNNENITVNNGNSDTFDDKENGNHNQNDDNEMECNTNEKTLGKNNELINNNKSQNNQNNNNNNNNNNNNNNNNNNNNNNNNNSEKDKNEAKSDFECPNTANFLSANAESLEKLQNLTHQVATALTTPINEADQNRLNEWHATLLTLQEQHQHFLRIQLLQGLQSNLKGNQMDDKSSSNNNNNNNHNNGDIEEDEHNCGDENVDDENEFRGNFQKRISSCDNNVDDNDDDDDDDVDDGDIDGEADVDDMDDDIIPPNHMYPKNAEREEGELTEEQMEEARRIYQEHRKLYYRNEEMRRTQLMNDILGNDKSGSNNELKKVITSPSSTGAALGAGGGNNAANTPVNSTSALASLSSAIMSLESSFGSSFVSNIITDHDQPSSMDGLNSLEMLQKTTEEVLDSASRGILSGGLTDEMSFKNDGKGRNEPFFKHRCKYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTQKYPDVLMNPNPIPEHLDGLYPSILPPLASGQPQPLSPPLPTSSSSVRSMAPPKTSANTSTTTTTTTTTATPSTSSLRQHLHSGQSSRIPSSSNIQNNSQQQHNLHHNPHQQQSPQHQQQQTTSKSQTHSLASHIHSSQLPPMGSASSSLQSQTQEQLTIAALQKQRLPNSANMFGLSSDVNDIHGIHNYRGLPFLPLPFDLLKQMGQLPFFNAAMREMLQQQQQQQQQQYQQQQQQHHDQETQHEQDKPADLSKPMASRSSSIKDEIKDEPISPRSSMDNDDVDRLSSSDINPIERRSANENDVNAKRKSPISASDLNAAGAKKFMCNNYNKDDDNSAIKSIEDLRLTSSPHSSNTITRPPPTLSSSSSIHNQSHNNQQPYPYNHHYPPPHHHPQNPHHHLHQQLQQQQQQQQQQQHQQSSHHPHNRDLTENSSKISPTSSSSSVHQSSSLNNKLSPREFHHLPSPFHDQQQQQQQQQQQQQQQQQQQHQQQLAHEMKIFPPMLPRPGSSDNSWESYIEVDKSSSETSKLQQFVDNIENKITDPNECVVCHKVLSCRSALQMHYRTHTGERPFRCKLCGRAFTTKGNLKTHMSVHRMKPPMRTIHQCTVCHKKYTNSLVLEQHVRLHTGAQTDLTIDQINAAELRDYGLRPSGFPMGMPYSLPLSFHGMGGTVEGSGMSMGGGCNESFDGNDDYMDEDFDDEINFDDEMSNGNSLSSDSNQNISSNCTKSNINNNNNNQNNQTNSLSDNSNNNLNDNNNNIDNHNNNSSDNNINNHRNNTNTNSDEINLRLVMNASPVLIDGIKNENLSRSSTPASHLEEEHEPHGKQSSMSETPSPLSASQITISTPVRPTSRTTTITPTTTTTTTTAAAALSTTTTPPSSILTLKSPSFGTEQSSRPLSNTALIPLSSPASSVASSSLHPSPSPGSSDLCQGALDLTPRSSSSELKSSPRNILSHALPSQHHQQPQPQQQQQQQQPPQLNQHSTRSTPPSPHPNSQQKLQGGLPCLPATFPPFPNFAFIHHSHQAAVAAAAAAAAVASSSSSSSASSPMMVASAALNNLVQSVSPMGGSYPMSLPGVRGNTTCSICVKHFACQSALEIHYRSHTKERPFKCGLCPKAFTTKGNMKQHLMTHKLRDNATLRLSKSPSLLSSDGGASNLSTDSLKEQRNYKQLMREHQLRNISESELSPRSNENSSKGSASSSNLDLNMQYQLYQQQQQQQLQQNILSFQNNNNNKSNLNNNGNNNNNMERRERSQQQLQSSSSSSQFQQETNFQNMLLDRQRLHQQQQQQQSQSSQSNKSETHKSRSMSPNLDLEQQSNNNSKLTNVSESQESSTNLKDNASFNIPSQPLPPITSPSSQSSILLSQSLSAAATSQSKQQQHRSPSTPPPHPHHHPNQHHHQQSSKLSSVRSIRSLSSSSSRTPSPAPLPPPTLLQMPSVSPSLQQPQQFKSSSISHSQSSNLSLPILPPSSQLSPPQPPPPSSSSQLFVSSGAALSYPEEKTASHLERLQQFHTNSLMIQPLKMEVQQLKQAVLDGNGGTGDNGSGDQKHFCHLCQKNFSSTSSLQIHMRTHTGERPFVCSVCQKAFTTKGNLKVHMGIHTWSGTSRRGRRMSLELPFNGAMPLMLQSHPDFLQRHPEFYHPYLPNHILGRMQPSMNFEQQQLHHHQQQQQLHKHFDSRGAPLSLPSLPPQSLPLSSSSTSTSSALTVTQSGANQSSSSSSSSSTSAFPSASTSLVNNSSSTNKYHSNTNGLLNYSNAFSDRFNLFAQAELLRQSSTTTSSSSSSSASPQSQQIQQLHSAYINNAADDLTPSPSNSNVDADCAMESLKHNGGGGGRDHHSMSPSSSSPPSSSSPPSSASPLSLRARPIVKGSNSPDSIPPKLWKLHLESQTLLKTNQTNNNNNTNSDSINLSQTKSDVKSTTEELLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -