Dfeb009524.2
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- -
- Assembly
- GCA_958336335.1
- Location
- OY284470.1:1259729-1262927[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.022 1.2 10.1 0.5 1 21 482 502 482 503 0.91 2 10 1 59 4.8 0.2 2 23 512 534 512 534 0.95 3 10 0.0013 0.075 13.9 1.8 1 23 540 562 540 562 0.95 4 10 1.6e-08 9.2e-07 29.4 0.8 1 23 578 600 578 600 0.99 5 10 0.00029 0.017 16.0 0.9 1 23 604 627 604 627 0.96 6 10 3.2e-05 0.0018 19.0 0.2 3 23 660 680 658 680 0.97 7 10 4.9e-05 0.0028 18.4 1.2 1 23 686 709 686 709 0.93 8 10 2e-06 0.00012 22.8 0.5 1 23 715 737 715 737 0.99 9 10 3.8e-05 0.0022 18.8 1.5 1 23 743 765 743 765 0.98 10 10 0.0032 0.18 12.7 0.3 1 23 771 795 771 795 0.93
Sequence Information
- Coding Sequence
- atGCAAGGTAATTTAAAGCACACATGTCGTACATGCTTACGAAGTGATTCCCATGAGATTATGGTCCCTATATTTGAGGACACCGATCCCGATGAAGCCGTTAATAATTCTTTAATGTGTATATCCGAAGAATTAAATTCATTGCAATTAAAGATAAAACGTGATGATGGGTTACCCCAACAATTGTGCATGGAATGTATGGGAAAATTAACAAATGTTAGCACATTTCGAATAATATGTCATAGGTCACAagcaatattaaataaatattataaacgtCATTTAACTGATAAATCTCAAGTTACACAACCTCAACCGAATAGtgaaaaagtaaatataaataaaaacgaaattaAAACTGAAgttgcaattaaaaaaatagaccacacaaacaaaaaaccattACACTTTAATGTACCCATTACAATCAAAAGCGATGTAATTCCAATTACAACAAAATCGTCCAATTCCACTTCAATTTCATCGAAATTAATTCCAATTTCGGCTACTAAAATACCAGTCCAAGGTCGTTCCTCAACAGTAACAATGTTTACATCCAAATCAACAGCAACAGCACAGAAAATTCCAGCgtatacatatttgaatacGGAATCTGTAAACAATGCAAAGATTTTTACAATTGATAACGTTGATGATTCTCGTCCGGTTCTATTAAATAGTGGTGTTAAAGATGCTGATGGTATATGTAATACCGAAAATGATGTTATTTATACAGAAATAGATGAAATCAATGATGGTAatgatcatgatgatgatgatgatgatgatgatagtCTTATAGagctaaaaaatcaattaGAAAATGATTTTGAACCAGAATCAAATttgaatgataataataatgataataataataataataataataataataataataataataataataataataataataataataataataataataataacaataataataataataatagtgcGAACGATAATGACGACATTGATAGTTTAATTTATGAACTCAGTTCCAAtcataatgatataaataatgaatcggaaaattatgaaattgtttattttactgacgataaaattgatgaaaaatcaCAACCAACCGGTAATGTTGTTAATGAACGTGAAATTGATAAAGAAAAAgatgataatttattgtttgatTATGATTCTGTGAAAGATGTTTTTGTTGAAGAAATTGTTGATATTGGTAAAGAAGAAAATGATGATGCTAATAATGAAATCATAGAAGAATATGTAGAATATTATGACAAGGACGATGATGAAGTggtaatattaaatgaaaattacgATGATTTTGTTGATGATAATCAATCGGTTCATTTTAATGTTATTGAAACGTCAGAATCGGGTGCCGATAATAATCGTTTAATTGTAAATCgcataaaaaatcataaaaaacaaaaaaaagaatgtttatcatttaattgtatttattgtgATGCATCATTTAAtactgaaaaaaaattaaaacaacacCAAAATGGTAAATGTTCGCTAATTAAAATTCGCACATGTCGTTTCTGTGAAGAAATATTGGAAACAGTTAATGAATTACGTGACCATATAACGACGTCCCATTCAAATGAACGACCGCATAAATGTATTGTTTGTAAAATGGGATTTTCCCGTCTTAGTTATTTAAAACTTCATATGGCGACACATGAAAAAGattttgGACAGCCTCAATTCGATTATGTAGAAGAATCATATCAATGTGAAATTTGTGGAAAAGGTTTTACTCATAAATCAGCATTAATCATTCATCTTCGTACGCATTCCCAATCATATTCATGTAGTGTATGTCATCTAACGTTTGTTAAACCGAATGCTTTAAAATCCCATTATTTATCGGCACATGATATAAGAATGATTTCAATCGGAAAACAAAGAgtaaaaccaaataaaaaaccaaaaacaccGAAATTGAAACCAGGAATACCTGCTCAATATGGTTGTACATTGTGTAATAAAGTGTTCATGGTACCATCATCGTTAGAGTCCCATATGAAAGTACACACAGAGGAACGTAAACATGCTTGTACATTATGTGGTAATACATTTAAACGTGCCGAGCATTTACGTATTCACATCAATGGAGtacatttaaaacataaacCATATGAATGCAAGGAATGTGGTCAACGTTTTTCGCAAGCCGGTGATCGTAATGTTCATATGCGACGTCACATCAatgaaaaaccatataattgtaaatattgtGATCGAAAATTTCGTTTAGTTAAAGCGTTACGATCACATATACGTattcataccggtgaaaaGCCATTTAAGTGTGCCGTATgtaatttagattttatttctTATGCATCATTGGCAAATCATACAAGGAAAAGTGAACATCAAGAAGTTGAAAATCAAATACGTATTCATGATGAAATTAATGATAATGACGAGTAA
- Protein Sequence
- MQGNLKHTCRTCLRSDSHEIMVPIFEDTDPDEAVNNSLMCISEELNSLQLKIKRDDGLPQQLCMECMGKLTNVSTFRIICHRSQAILNKYYKRHLTDKSQVTQPQPNSEKVNINKNEIKTEVAIKKIDHTNKKPLHFNVPITIKSDVIPITTKSSNSTSISSKLIPISATKIPVQGRSSTVTMFTSKSTATAQKIPAYTYLNTESVNNAKIFTIDNVDDSRPVLLNSGVKDADGICNTENDVIYTEIDEINDGNDHDDDDDDDDSLIELKNQLENDFEPESNLNDNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSANDNDDIDSLIYELSSNHNDINNESENYEIVYFTDDKIDEKSQPTGNVVNEREIDKEKDDNLLFDYDSVKDVFVEEIVDIGKEENDDANNEIIEEYVEYYDKDDDEVVILNENYDDFVDDNQSVHFNVIETSESGADNNRLIVNRIKNHKKQKKECLSFNCIYCDASFNTEKKLKQHQNGKCSLIKIRTCRFCEEILETVNELRDHITTSHSNERPHKCIVCKMGFSRLSYLKLHMATHEKDFGQPQFDYVEESYQCEICGKGFTHKSALIIHLRTHSQSYSCSVCHLTFVKPNALKSHYLSAHDIRMISIGKQRVKPNKKPKTPKLKPGIPAQYGCTLCNKVFMVPSSLESHMKVHTEERKHACTLCGNTFKRAEHLRIHINGVHLKHKPYECKECGQRFSQAGDRNVHMRRHINEKPYNCKYCDRKFRLVKALRSHIRIHTGEKPFKCAVCNLDFISYASLANHTRKSEHQEVENQIRIHDEINDNDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -