Dfeb009479.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- ZFY_1
- Assembly
- GCA_958336335.1
- Location
- OY284470.1:483993-486912[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.16 9.1 7.4 2.3 2 23 119 141 118 141 0.89 2 13 3 1.7e+02 3.4 0.8 2 23 153 174 152 174 0.91 3 13 0.00065 0.037 14.9 0.5 2 23 327 348 326 348 0.95 4 13 0.0001 0.0057 17.4 6.4 1 23 356 378 356 378 0.95 5 13 2.1e-05 0.0012 19.6 5.9 1 23 384 406 384 406 0.98 6 13 0.0029 0.16 12.8 1.9 2 23 412 434 411 434 0.95 7 13 0.001 0.06 14.2 0.4 2 23 445 466 444 466 0.96 8 13 0.0068 0.39 11.7 4.4 1 23 472 494 472 494 0.99 9 13 1.8e-05 0.001 19.8 0.3 1 23 502 524 502 524 0.96 10 13 0.00077 0.044 14.6 1.1 1 23 530 552 530 552 0.98 11 13 5.7e-08 3.3e-06 27.6 1.3 1 23 558 580 558 580 0.98 12 13 1e-05 0.00059 20.5 0.8 1 23 586 608 586 608 0.99 13 13 6.5e-05 0.0037 18.0 1.2 1 23 613 636 613 636 0.97
Sequence Information
- Coding Sequence
- ATGGATGTTTCCAAATTTTGTCGAACGTGTTTAAAACATACTACTGTTGAAATGCTTTCAATATATGATTGTATTGATGGGGTTCTTCTCCCTGATCACGATGATATTCCATTctcaacaacaaaacaaacaatatcTGAAATGCTAGAAATAATTACAGGAAATAAgATTATAACATCTTCTACATTATTACCAACAAAAATTTGCGACAAATGTActgataaattgaaaatatcatTTGAATTCAAAAACCAATGTAATAAATCATTCGAAGAATTAACAACAATGTTAAATGAGAAATTTATAACAACCACACCAAAAGAAATTGGTCATCGAACAACACATTCAGATATAAGATGCCGAATATGTCAAAAGACTTTTGCATGTTTAAAATActtagaaaatcatatattcgattttcataataaatccAATAAACCAACTGGATTTAAAAGTGAATGTAAAGAGTGTAAAAATACATCTGGtcaaaataatacatttattaaccATAATGAATTACATGAACATTGTGATAAGCATTTGGAGAATATTGAAAATGCTAAACGAGTTAATGACGTAACAATAACACGACGTAACAACTTACGTATAACTGAAGAacaatttgatattaaaatcgTTCAACTGAATGCCCAAGTGAGGGCACCCAAAGAGCCACCCATAATCACTGATTTTGATGTAGGTGATAATAGTGATGATGATAACAATGATGAATATGTCGACgttaacaaattaaaaaagacATTGAAACCTAATAGTATGAAACATTGTGAATTAATTGCTGAAGTACAACAAGCTTCAACTATGAGGGAAATGGTTTTTCCAACCAAACCAAATTACAATTTCAGCGAAATAGCGATACCATCAATTCCcgataaacataaaattgaaCCTATATCAATTAACAAAAGCTCAGCATCATtattacaagaaaaaaaatcgtcGACTCAAATTAAAATACCATGTAATTTATGCAAATATACGTTTGACGATTTTGAGACATTTACAAGACATATGGATTGGCATgcaacaataaaaaacaaaatccatAAATGTTCAATTTGTAATGCAGCATTTAAACGAAAAAGTCACTTAACTCGACACTTTTTTTCCCATAGTAATGAAAGACTATTTCAATGTACAATAtgtaaaaaatcttttaaatctCCATTTTGTTTAACCAAACACAAATTAACACATGACGAGAAGCGACTAACGTGTACTATAtgtaatatcaaatataaactTCCATCACATCTAacattacataataaaaaggaGCACACCACTGAATCTGTTAAACAAATAACCTGTATTTGTGATATTTGTTCAGCGGTTTTCgtttcatttgaaaatataaaacgtCATATGGAAATACATACAGGACAACGACAATATGAATGTAAGTTTTGTAATGAAagatttaaattgtataaagataaaagaaaacatttaAGATCCCATATGAAAGATAGCAATTGTTCATATTTGTGTCCAGAATGTGGTAAGACTTTGAAAGGCGGTTCAAATTATAAAGTGCATATGCGTCGTCATAATGGGGAAAACCCTTATAGTtgcaaattttgtattaaagcATTTCCCCGCAGTGCTGACCTACAAGCACATGAACGACATCATACCAATGTAAGGCCACATAAATGTTTGGTTTGCGGTAAAGCATTTACTCGATCATATGATTTAGTGGTGCATATGCGAACTCATACCGGTGAACGTCCATATAAATGCACATATTGTCCAAATGCGTATCCACAAAGCCAAgatttaaaaacacatattCGTCGACATACCGGCGAAcgatttaaatgtaatatttgtGATGCTGCATTTATTCAGAATCACCTTCTGTCACAACACAAACGAAATGTTCATGGCATGACGATTCCTGCAAATAACGgacgattaaaaaaatttatttcggCAAGTATATCAGATCAATTTTGA
- Protein Sequence
- MDVSKFCRTCLKHTTVEMLSIYDCIDGVLLPDHDDIPFSTTKQTISEMLEIITGNKIITSSTLLPTKICDKCTDKLKISFEFKNQCNKSFEELTTMLNEKFITTTPKEIGHRTTHSDIRCRICQKTFACLKYLENHIFDFHNKSNKPTGFKSECKECKNTSGQNNTFINHNELHEHCDKHLENIENAKRVNDVTITRRNNLRITEEQFDIKIVQLNAQVRAPKEPPIITDFDVGDNSDDDNNDEYVDVNKLKKTLKPNSMKHCELIAEVQQASTMREMVFPTKPNYNFSEIAIPSIPDKHKIEPISINKSSASLLQEKKSSTQIKIPCNLCKYTFDDFETFTRHMDWHATIKNKIHKCSICNAAFKRKSHLTRHFFSHSNERLFQCTICKKSFKSPFCLTKHKLTHDEKRLTCTICNIKYKLPSHLTLHNKKEHTTESVKQITCICDICSAVFVSFENIKRHMEIHTGQRQYECKFCNERFKLYKDKRKHLRSHMKDSNCSYLCPECGKTLKGGSNYKVHMRRHNGENPYSCKFCIKAFPRSADLQAHERHHTNVRPHKCLVCGKAFTRSYDLVVHMRTHTGERPYKCTYCPNAYPQSQDLKTHIRRHTGERFKCNICDAAFIQNHLLSQHKRNVHGMTIPANNGRLKKFISASISDQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -