Basic Information

Insect: Dilophus febrilis
Gene Symbol: cnpy4_1
Assembly: GCA_958336335.1
Location: OY284470.1:18891523-18895842[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 85 4.3 5.4 3 20 199 216 198 218 0.89

2 13 3.1e-06 0.00018 22.2 1.5 1 23 235 257 235 257 0.99

3 13 0.072 4.1 8.4 1.4 1 21 263 283 263 286 0.95

4 13 0.056 3.2 8.8 4.1 1 23 291 313 291 313 0.98

5 13 4.9e-05 0.0028 18.4 2.0 1 23 317 339 317 339 0.97

6 13 0.055 3.1 8.8 0.2 1 23 345 367 345 367 0.90

7 13 0.0026 0.15 13.0 4.0 1 23 373 395 373 395 0.98

8 13 1e-07 5.8e-06 26.8 0.4 1 23 401 423 401 423 0.98

9 13 4.5e-06 0.00026 21.7 1.9 1 23 429 451 429 451 0.99

10 13 0.0039 0.22 12.4 0.2 1 23 464 486 464 486 0.96

11 13 4.4e-05 0.0025 18.5 0.4 1 23 492 515 492 515 0.96

12 13 1.3e-06 7.4e-05 23.4 1.1 1 23 521 543 521 543 0.99

13 13 5.4 3.1e+02 2.5 0.2 1 14 549 562 549 566 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	85	4.3	5.4	3	20	199	216	198	218	0.89
2	13	3.1e-06	0.00018	22.2	1.5	1	23	235	257	235	257	0.99
3	13	0.072	4.1	8.4	1.4	1	21	263	283	263	286	0.95
4	13	0.056	3.2	8.8	4.1	1	23	291	313	291	313	0.98
5	13	4.9e-05	0.0028	18.4	2.0	1	23	317	339	317	339	0.97
6	13	0.055	3.1	8.8	0.2	1	23	345	367	345	367	0.90
7	13	0.0026	0.15	13.0	4.0	1	23	373	395	373	395	0.98
8	13	1e-07	5.8e-06	26.8	0.4	1	23	401	423	401	423	0.98
9	13	4.5e-06	0.00026	21.7	1.9	1	23	429	451	429	451	0.99
10	13	0.0039	0.22	12.4	0.2	1	23	464	486	464	486	0.96
11	13	4.4e-05	0.0025	18.5	0.4	1	23	492	515	492	515	0.96
12	13	1.3e-06	7.4e-05	23.4	1.1	1	23	521	543	521	543	0.99
13	13	5.4	3.1e+02	2.5	0.2	1	14	549	562	549	566	0.83

Sequence Information

Coding Sequence: atgtaCTTGTGTTCATTACATTTACATAAGGAAATTATTGGCAAAAGGATTGAATGGGTTGATGGACTCAATTCAGTATTGCCAGACGCCATTTCAATTAATTCGAAGATAAACAATAAGGAACAAGAAAATGATACAGAAATAGAAATTTCAAATGTTAAAATTGAATGTGATTTACATGTAAATGAATATGATTCAATTGTTGATATGGCTACGAAATATGATTTACAAAATACATGTAGAACATGTCGGGCACAAAACGTTTCACTTGAGAAAATCTTCAAagatttaaatgaaatttccAATACGCCGCGCTTTAATATTGCCGATGAATTAATGTATCTAAGATTAGATATTAAGGAAAACGTTGCGATCGCAGTTGAATCACCTATGGGTAACGTAAACATTAATAACACCAATTTAATCAATGAAAATGAGAGTAGAAGCGAAAACGCACAAGATGATAATAACAGCATTATTAGTAATGTTATTAAAGAAATAACACATTCTACAAATAAGATTGCAACATCTAAAAAAAGAACTCCCATTGAAGAAAAAGCACCAACAAATGAATCCAATAGGCCGGAACCATTTTGTGATAAGTGTGGAAaacattttaaacatattaGATCCTGTAAAGCACATATAACCAAAGgaatatgtattgaaaataaagaaaaacaccGAAAAACATATAGTCTATATACATGTtcaatatgtaataaaaattttcgaAAAGCTAATAATTTTGCTATTCATATGAAATCACACGACACAGAGAATTTATTCAAATGTGAAATATGTGAACGTATATTACAAAGTGAAAACAGTTTAGTCAgacatataaaatgttatcataCAATATCCGAACATACATGTCCGCATTGTTCGATGCAATTTAATAATgaactaaaatatttatggcatttaaaatcacataacaaatcatttaaatgtaaatattgtaataaatcaTTTGTACAATCGAATAGATTAAAATTGCACGAAGAAGTTCATACCGGTGCCAGatcatatttatgtaatatttgtGGAAAAGAGTTCTTATCTAAAAACATATTAGTGCGGCATTTATTGTGGCATAAAAGTGAGCGCCCCTTCAATTGCAGCTTTTGTAAAAAAGGTTGTTTAACTCGTTCAGAATTAACAATACATATGCGAACTCATACAGGTGATCGTCCTTATAATTGTGATTTGTGCGATAAagGTTTCACACAATCATCTGCATTAACAATACACATGCGAATGCATACGGGCGAACGTCCCTATAAATGTGAATTGTGTGAtaaagattaCAGAGAAAAAAGTAGTATAACAAAACACATGCGAACCCATCAATCGCCAAGATCACAAACACGATCAATACGAAAATATCTATGTGGTTTAtgtaataaaagttttttaataGCTGAATCATTGACATGGCACATGAAAATGCATACGGATGAtcgaaaatataaatgtacattatGTCCTAGTGCCTTCAAACGACAAAAAACTTTACGTGTTCACATAAACGGGGTACACTTGAAAAAGAAACCATATAAATGTGAGGAATGTGATAAAACGTTCTCGCAAAGGAATGCAAAGACTATTCATATGCGTGTTCATACCGGTGAAAGGCCATATAAATGCGAATTATGCAATTCATATTTTGCATCATCCGTTAGATTATCACAAGAAGAACAAGGAGTACGTTATGCAGACAGATGTGAAGCATGTAAAATATTGGCCACTGAATTACAAGATCGTTTAACTGAAACTGGAAAATCTCATGATGTTCTTGAATTTGGatattcggTTGACGATGTGAAACCGAAAAAACGtacagaatataaaaaaagtgaaTTGCGTTTATTGGAATCCCTTGAAAATGTTTGTGATCGTATActacaatataatttacataaagaACGTAAAGATAGTACACGTTTTGCTAAGGGAATGTCACAAACATTTCGAACTCTACACGGTTTAGTTGATAAAGGTGTTAAAGTCGATTTAGGTATACCGTATGAATTATGGGATAATCCACCGGTTGAAGTTACCAATATGAAAAATCAATGTGAAACATTATTGGAAAACTATGAATATGCTATTGAAAattggtattttaaatatcaaaatgatgCACCATTAATCAAATATCTATGTGAAGATCGTGCATTAAAAGATTCAAATAGtaaatgtttatatgaaaCAGAAAGCCAACATACACAGGATGAACATGATGTTGATAACACTGATAAGAACAAAAAAGGTGAAACAGATTCGGAAGAAGATaatgatgaggatgatgatgaggatgatgatgatacaagaaatgaattataa
Protein Sequence: MYLCSLHLHKEIIGKRIEWVDGLNSVLPDAISINSKINNKEQENDTEIEISNVKIECDLHVNEYDSIVDMATKYDLQNTCRTCRAQNVSLEKIFKDLNEISNTPRFNIADELMYLRLDIKENVAIAVESPMGNVNINNTNLINENESRSENAQDDNNSIISNVIKEITHSTNKIATSKKRTPIEEKAPTNESNRPEPFCDKCGKHFKHIRSCKAHITKGICIENKEKHRKTYSLYTCSICNKNFRKANNFAIHMKSHDTENLFKCEICERILQSENSLVRHIKCYHTISEHTCPHCSMQFNNELKYLWHLKSHNKSFKCKYCNKSFVQSNRLKLHEEVHTGARSYLCNICGKEFLSKNILVRHLLWHKSERPFNCSFCKKGCLTRSELTIHMRTHTGDRPYNCDLCDKGFTQSSALTIHMRMHTGERPYKCELCDKDYREKSSITKHMRTHQSPRSQTRSIRKYLCGLCNKSFLIAESLTWHMKMHTDDRKYKCTLCPSAFKRQKTLRVHINGVHLKKKPYKCEECDKTFSQRNAKTIHMRVHTGERPYKCELCNSYFASSVRLSQEEQGVRYADRCEACKILATELQDRLTETGKSHDVLEFGYSVDDVKPKKRTEYKKSELRLLESLENVCDRILQYNLHKERKDSTRFAKGMSQTFRTLHGLVDKGVKVDLGIPYELWDNPPVEVTNMKNQCETLLENYEYAIENWYFKYQNDAPLIKYLCEDRALKDSNSKCLYETESQHTQDEHDVDNTDKNKKGETDSEEDNDEDDDEDDDDTRNEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -