Dfeb004786.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- -
- Assembly
- GCA_958336335.1
- Location
- OY284468.1:58738393-58743277[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00013 0.0076 17.1 0.8 1 23 199 221 199 221 0.95 2 15 0.025 1.4 9.9 1.5 1 23 227 249 227 249 0.96 3 15 0.0014 0.082 13.8 0.2 1 23 380 402 380 402 0.98 4 15 1.3 74 4.5 0.2 2 23 409 431 408 431 0.94 5 15 3e-05 0.0017 19.1 1.8 1 23 523 546 523 546 0.97 6 15 0.042 2.4 9.2 0.2 1 23 599 621 599 621 0.94 7 15 4.8 2.8e+02 2.7 0.2 1 10 627 636 627 650 0.82 8 15 0.055 3.1 8.8 1.4 2 19 658 675 657 676 0.96 9 15 9.1e-05 0.0052 17.6 6.4 1 23 685 707 685 707 0.97 10 15 0.014 0.81 10.7 0.5 2 23 713 734 712 734 0.97 11 15 1.7e-06 9.5e-05 23.0 0.6 1 23 742 764 742 764 0.98 12 15 0.0087 0.5 11.3 0.2 3 23 772 792 770 792 0.97 13 15 3.6e-05 0.0021 18.8 0.2 1 23 798 820 798 821 0.95 14 15 0.0027 0.15 12.9 0.0 1 23 835 857 835 857 0.96 15 15 0.052 3 8.9 0.2 1 20 1439 1458 1439 1461 0.93
Sequence Information
- Coding Sequence
- ATGGATATTGAAGAAGGAACTTATGCTATCGAATGGATAGATGAAAATGGGGATGTCCATAGTCAAATGCatggaaataatttaaatgataatgaaatgaatgatAAAACCATTGATGATGTTATTGAAATCGATGATATAATTGAAGAAATACATGAAACCGATGGACAAGAAAATGAAACAGAATATTATGTGAACATGGACAATGGAATGGAAAATATCCATTCAATACATCATGATCATTATCATCATACGATAATGCCACCAAATAATCCGGATCAAACGGCGGccgaaaatttaatatatatggcaCAAGATGGAAATGTTACCATAGTTGAAAATGGTCATGAAGACGTACACAATATCAATCAATCGGGAAATGAAATTGTACAGCATTTTGAAAATGACAATGGACCATATTATGAATGTATAACGGAAGAGGTTATAACAGAAGAATTGATAACCGATGATTGGGTACAGGAGCAAGgaaaagaaagagTTCAAGTGGTATTACAACCaacgaatttatataatcatgtaATTGTTGATGATTCAGAAATTCCATTACCAACAGTAATGGATAATACGCGTCCGTTTCCATGTGATTTTTGTTCAAGACGTTTTCGTAAACGTGGAAATTTAATGAATCATATGGTAGCGCATAAAAACGATCGTCCACATATTTGCAATTTATGTGGTTCAAAATATTTTCGACGTTTagatttaataaatcatttaaaggTGCATGCCCAAGTTCCCGAAGAAATCGATAATGAAATGGttaaCATAAATAATCAAACGAATTCATCAACAATGTCAACGTTAATGCAGGTTAAGCATAACATTAGGAATTCGTATGTTAAACGTAAGGATAGAAAACGACAgaaaaaattaccaaaagTTGAAAAAAATACTACAATTGGATTTTCCCACgatgatattaaattatctaatgttaataatatattgcatTCGACATTAcatgattataatttaacgTCGATTACGGATAATagctataataataataataatagtagcagcaatatgatgaataatatgaataactttaatcaaacaacaacaacaacaaccatgTTAGAAGAAAAACATCCCATAACCGATCCAAAACGACCATTTGTTTGTCAATCATGTGGTGTATCATTTGCACGTGAAAAAGCTTATCTATCCCATTTAAggCTTCATGGTGGCGATTTACAATTGGAATGTGATAGTTGTAGTGAAATGTTTTGGAGTGTAACATTATTACGTGAACATCAACGTTTATTTCATTCAATACCACCTGAACAACACGAGCATCAACAACCGGAGCAAGAGCATGAACAGGAACAGGAATATGAAGATGAACATGATCATGAACAGTCTCAACCCGAAAGAAATCCCATTTCCGATGAATATGAAACAAATAATGAAACAAATGATTTATACCATGAGGAACAATCAGAAAGCGAAGACGCTGATGATGACGATAAAGATGTTGATTATTTTGcagatattaataatattgatgaaGATTCAGAAGATGAAGATACAAAATATGGTCAATACTTTTGTAATATTTGCGGTATGGCTTTTCAtcgaaataatttattgaaacgTCACGTAAAAACAGcacataaacaaaataacaatgtTCATGTGGGTGTGGGCGGTCGTAGAAATCGTGGTGATGAGAGAAACGCGGACCAGGATGATGAGGaaggtggtggtggtgttgttgttggtggtgctggtggtagtgaatataataatggaaatgatttaaattcaaaacatTGTTGTAATGTTTGTGGTCAAAATTTTGCGGAAGCTCTTGAACTATTGGCTCATGCCGAAATACATGCTAGAAATGAACAATATAAATGTGTTTTGTGTGGTGAAAAATTCTTAGAagaatcaattataaaaaagcACATTTCGAATGTACATGAAAATGTAATAACCGAAACAACATGTCGATTATGCGGTAAACAATGTAAAGATGCCCGTTCATTGATAAAGCATTCATGGGAGCATTCCAAAGAAAAGAATCATTCCTGTTCGAAATGTGGTAAAACATTTCATAATAAAGCACGACTAAAACGTCATATGCTATCGCATCGTAATAAATGTGTACGTTGTGATGTTTGCGATGAAGAGTTTGCCGATGGCAGAACACTGATGAATCATCGTCATTCGCATACCAATGTATCGGGTCGTCAATTTCCATGTAAAGATTGTGGTAAAACATTTGGTTCACGGAGTTCACAACAAATTCATATGCGTATACATACCGGTGAACGTCCATATGGTTGTCGATTTTGTTGGAAAGCATTTGCGGATGGCGGCACGCTACGAAAACATGAACGAATTCATACAGGTGAAAAACCGTATGCATGTCCGGTGTGCCCGCGTGCATTTAATCAACGTGTTGTTTTACGTGAACATATACGTTCACATCATTCGGCGCCCGACGCAAAAAGTGGCACCATTTTGTGTCCATATTTTTGTACCGTTTGTGAAGAATCATTTTCACAAGCAGCCCCATTGGTACAACATTTAATTGAACATAGCGATACGAATACAGCCATGAAACGGCAACCACctGTTGGACCACGTAAATATAAACGTCGACGAAAATTAAAACCACATGAATTGGAACGTATGCGTACGTTAAATCCGAAAACAAGCGATGAAGatgattttcatattaatacctcaaatgatattaatataacaataaatcaCGATGAAGAAACAAATCACGAAGAATCTTGTATTGTTGAACCGCCAAATCGACGtagtacaaaaaatataaaacgtgaaaagaaaatatcatTTAGTACAACATTTGACGATCATTATTCATCATCGTCATTCAAtcatatgaatgaaaaaagtTTAAGTGATTTTGAACCATTAATGCAATCAccaataaaacaaattcagAATCCAATGCAAATACCATTATCGCCAACCACCACAATTACACCaccaaaatatgtatataaaaaatcgtCATTCAAAAAACGTTCaaataaagaacaaaaaagAAAGGAAACGGAGGaacgacaacaacaaaaacTAGCAGAACAATaccaacaacagcaacaaaatgaattatattattcacaaatacaacaccaacaacaacaacaatctaattatgattatgaatTATTAACAACGTCACAATCATCCATAGCATCTAATCAATTATTACCAATGCAAATATTAgcgccaccaccaccaccaccacgaccaccaccaccaccaccaccaccgctaCTAACAACACCACAATATGGGTCTCAACAACAACTATTATCAAAACCACGTATGATACATACACAAAAAACTCGTGTTACCGTTGAAGATGGTAAACGTAAAACACGTACATTAATAACACGTACCGATTCACATGGTGATGgtaataatatgaaaaaatcaGGTACACGTAAACGTGGACGTCGTCCCGGTTCAAAACAAAAGacaccaacaaaaaaagcTTTAAAAGCAGCAGCGACAGCCGCAGCAGccgcagcagcagcagcactAATAGCTTCACACTCGGCCTCACCATTACCATTCGACGATACAAAGCctaaatcgaaaaaaaaaggAACTAAATCCAAAGGTTTAggcaaaacaaataaaaaaaatcaaataaataatattgtaaaaacagaaaaatatgAACCATTATTaccatcgtcatcatcatatacCAATTTTACTGGTATGCCGGCAACTGGCGGTGGTGACGAAGAATACATATTAAGtgataatatagataaaagtaTAACAACATCATTTATTGGTAATTTAGAAAATCGAAGAACAAGTAAAAGAATTTCAAATCGTTATGATcgttataataatgataataaaataaaatatccaacACAAcaatcaccatcatcatcatcattattacaATCCGTAACTAATGATTTCAATGATCATCGATATAATATTGATAGTAAAATTAACTCCAATACTATGTTATTGGATGGaggaaatgaaaatgaaattgataatgGTTTAAATGctaatgatgataatgatgatgatgatgatgatgatgaagaagaagatgaagatgacgatgatgataatgaagaagatgacgatgatgaagatggagataatgaaaatgatgatgaaaatgaaaatgaaaataataataataataataatgaagacgatgaagatgaagatgaaaatgatgccgataatgataatgatttaataaatgatgaatataatattacgATAAAAGAAGAAGGAATTAAAACtgaatataatgaaatatttcgATGTGAAATGTGTGCGGCTGTTTTTAATGATCGCCATCAATTATTATTGCATGTACCAATTCATATTTAG
- Protein Sequence
- MDIEEGTYAIEWIDENGDVHSQMHGNNLNDNEMNDKTIDDVIEIDDIIEEIHETDGQENETEYYVNMDNGMENIHSIHHDHYHHTIMPPNNPDQTAAENLIYMAQDGNVTIVENGHEDVHNINQSGNEIVQHFENDNGPYYECITEEVITEELITDDWVQEQGKERVQVVLQPTNLYNHVIVDDSEIPLPTVMDNTRPFPCDFCSRRFRKRGNLMNHMVAHKNDRPHICNLCGSKYFRRLDLINHLKVHAQVPEEIDNEMVNINNQTNSSTMSTLMQVKHNIRNSYVKRKDRKRQKKLPKVEKNTTIGFSHDDIKLSNVNNILHSTLHDYNLTSITDNSYNNNNNSSSNMMNNMNNFNQTTTTTTMLEEKHPITDPKRPFVCQSCGVSFAREKAYLSHLRLHGGDLQLECDSCSEMFWSVTLLREHQRLFHSIPPEQHEHQQPEQEHEQEQEYEDEHDHEQSQPERNPISDEYETNNETNDLYHEEQSESEDADDDDKDVDYFADINNIDEDSEDEDTKYGQYFCNICGMAFHRNNLLKRHVKTAHKQNNNVHVGVGGRRNRGDERNADQDDEEGGGGVVVGGAGGSEYNNGNDLNSKHCCNVCGQNFAEALELLAHAEIHARNEQYKCVLCGEKFLEESIIKKHISNVHENVITETTCRLCGKQCKDARSLIKHSWEHSKEKNHSCSKCGKTFHNKARLKRHMLSHRNKCVRCDVCDEEFADGRTLMNHRHSHTNVSGRQFPCKDCGKTFGSRSSQQIHMRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACPVCPRAFNQRVVLREHIRSHHSAPDAKSGTILCPYFCTVCEESFSQAAPLVQHLIEHSDTNTAMKRQPPVGPRKYKRRRKLKPHELERMRTLNPKTSDEDDFHINTSNDINITINHDEETNHEESCIVEPPNRRSTKNIKREKKISFSTTFDDHYSSSSFNHMNEKSLSDFEPLMQSPIKQIQNPMQIPLSPTTTITPPKYVYKKSSFKKRSNKEQKRKETEERQQQKLAEQYQQQQQNELYYSQIQHQQQQQSNYDYELLTTSQSSIASNQLLPMQILAPPPPPPRPPPPPPPPLLTTPQYGSQQQLLSKPRMIHTQKTRVTVEDGKRKTRTLITRTDSHGDGNNMKKSGTRKRGRRPGSKQKTPTKKALKAAATAAAAAAAAALIASHSASPLPFDDTKPKSKKKGTKSKGLGKTNKKNQINNIVKTEKYEPLLPSSSSYTNFTGMPATGGGDEEYILSDNIDKSITTSFIGNLENRRTSKRISNRYDRYNNDNKIKYPTQQSPSSSSLLQSVTNDFNDHRYNIDSKINSNTMLLDGGNENEIDNGLNANDDNDDDDDDDEEEDEDDDDDNEEDDDDEDGDNENDDENENENNNNNNNEDDEDEDENDADNDNDLINDEYNITIKEEGIKTEYNEIFRCEMCAAVFNDRHQLLLHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -