Basic Information

Insect: Dilophus febrilis
Gene Symbol: grau_1
Assembly: GCA_958336335.1
Location: OY284469.1:2000265-2005276[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.17 9.8 7.3 3.8 2 23 273 295 272 295 0.97

2 18 0.28 16 6.6 1.7 6 23 304 321 304 321 0.99

3 18 2.3e-05 0.0013 19.4 3.2 1 23 327 349 327 349 0.99

4 18 0.00019 0.011 16.5 6.7 1 23 358 381 358 381 0.96

5 18 0.021 1.2 10.1 1.7 1 23 389 412 389 412 0.95

6 18 0.0018 0.11 13.5 0.3 2 23 419 440 418 440 0.96

7 18 0.047 2.7 9.0 1.0 2 23 450 471 449 471 0.96

8 18 9.5e-05 0.0055 17.5 0.2 2 23 477 499 477 499 0.96

9 18 7.7e-06 0.00044 20.9 0.3 1 23 504 526 504 526 0.97

10 18 1e-05 0.0006 20.5 5.5 1 23 532 555 532 555 0.98

11 18 2.4e-05 0.0014 19.4 0.6 1 23 841 863 841 863 0.99

12 18 0.0013 0.072 14.0 9.0 1 23 871 894 871 894 0.96

13 18 0.016 0.89 10.5 0.3 1 23 902 925 902 925 0.95

14 18 0.023 1.3 10.0 0.3 3 23 933 953 931 953 0.95

15 18 0.15 8.3 7.5 0.3 2 23 963 984 962 984 0.96

16 18 6.1e-05 0.0035 18.1 0.2 1 23 989 1012 989 1012 0.97

17 18 2.3e-05 0.0013 19.4 0.3 1 23 1017 1039 1017 1039 0.98

18 18 0.0016 0.09 13.7 2.7 1 23 1045 1068 1045 1068 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.17	9.8	7.3	3.8	2	23	273	295	272	295	0.97
2	18	0.28	16	6.6	1.7	6	23	304	321	304	321	0.99
3	18	2.3e-05	0.0013	19.4	3.2	1	23	327	349	327	349	0.99
4	18	0.00019	0.011	16.5	6.7	1	23	358	381	358	381	0.96
5	18	0.021	1.2	10.1	1.7	1	23	389	412	389	412	0.95
6	18	0.0018	0.11	13.5	0.3	2	23	419	440	418	440	0.96
7	18	0.047	2.7	9.0	1.0	2	23	450	471	449	471	0.96
8	18	9.5e-05	0.0055	17.5	0.2	2	23	477	499	477	499	0.96
9	18	7.7e-06	0.00044	20.9	0.3	1	23	504	526	504	526	0.97
10	18	1e-05	0.0006	20.5	5.5	1	23	532	555	532	555	0.98
11	18	2.4e-05	0.0014	19.4	0.6	1	23	841	863	841	863	0.99
12	18	0.0013	0.072	14.0	9.0	1	23	871	894	871	894	0.96
13	18	0.016	0.89	10.5	0.3	1	23	902	925	902	925	0.95
14	18	0.023	1.3	10.0	0.3	3	23	933	953	931	953	0.95
15	18	0.15	8.3	7.5	0.3	2	23	963	984	962	984	0.96
16	18	6.1e-05	0.0035	18.1	0.2	1	23	989	1012	989	1012	0.97
17	18	2.3e-05	0.0013	19.4	0.3	1	23	1017	1039	1017	1039	0.98
18	18	0.0016	0.09	13.7	2.7	1	23	1045	1068	1045	1068	0.98

Sequence Information

Coding Sequence: atggCAAATATAACAGAATCAATCTgtaaattatgttataattataatgaacaTCACATACAGTTCAATGATGAAAAAGCTATTGAATGGAAagtaattgatataataaaaaaacatttttggtTCAAGATATTTGAAGTCGATAGTCAATCAAATGCAATTTGTTTAGAATGCTGGAACGTTAcggataattttaataaattttacaataaaatagaGTCAGCACATAatcttaattatttaaatatagcaAACGAATCAGTAATAAATAGTAAAGGTGGTTTAAATAACAACAGCAATGATAAATCATTAATTACAAAAACGTTAGCGAAGTCAGACAATAATAATGGTGATGACGAAcgtataaaaaatgattgtttACAGTTATTAGAATCGGTCGTATGCATTGACGATAACTTTGTTCAATTGAAAGATGAAATTATTGGTGTAGTAAGCAATAATGTATTGGAATCAAAATGTTTGGGAATATTTGAAACAGCAGTGGCAATACCAGAACCGATATTAATCacaaatgaattaaatgatGAAGGGCATCATCCAGAAAAAACCAATGCGGAGTTACGCCCTGAAGAAATGTATGGCATTGGAAAAActgatatttataataagaaaagGCAAAGAggaaattttattgcattgcaatcgaaaacaaacacaaatagaaaatgtaaacaatcACAGAAGAAAACGTTAGATAATGAGGACATCGTAAAAGATAATGTTGAAATTATACTTCagaaaaaacatatacaaattgatcaggaaaatttacaaattcgtgatttttttaatattcaatgtGAATTATGCCATTGCAGATTTTCTACATTTTTAGAAATAACTGAACATTATCGTACTGAACATAATAGTAAAGGTTACATTACGTGTtgtaaaaagaaattttttcgTCGTAGTTTAATTCTACAACATATTAGACAACATTCAGATCCTGAAGCTTTCAAATGttgtatttgtaataaattatatacagataattcAGCATTGAAAACGCATATTCGATCGCATTCAAGCGGCGATCAAATAAAACCATATCAATGTGATAAATGTGACAAaacatttgtaaaaaaatttcaattaacccatcataaaaaatatcgGCATTTTACCGAAGCggataaaacatttatatgtgatatatgtaatagaagATTTTTATCAAGATGTTATTTAATGTCACACATTAAAGGTGTTCATGAAAATGGTAATTTACAAATGTGTGATATATGTGCAAAGGTGTTTAAAAGTAAACCAGTTCTTGAATCTCATCGTCAATCACACTTTGTTACAGAAGTTAAACCAAAACTGCAGTGCAATATTTGTGGAGCATGgTTAAAACATAAACGTAGTTTACGTACGCATTTGGCACGTCATAAAGATACATGCAGAACTTGTCCGCAATGTGGTAAAGAAACACCAAATAGAGACGCATTAAGAAATCACATAAAATATGTGCATGCCACAAAGTTATTTCCATGTAATATGTGCGAAAAATCATTTAAGAAACCGATTGAATTAAAGGAACATATGGCATCGCATACTggtgaaatattatataaatgtccACACTgtacaaaaacatttaattcaaATGCAAATTTACATTCGCATCGGAAAAGAGCACATCCAATTGAGTGGCAAGAAAATCGTGGAAAACCTGTTATAAATACTTTACAAATATTCGATCAAAATGGTGTTGCATTAAATATTgccaatataataaaacaacacTTTTGGTTTAAgTTTATAGAAAATGATGGACAGGAGAATGTGATTTGTGATGAATGTTGGATACAAATAAAAGCATTTcatgcattttataaaaatgttgaattaactcataatataaattttggtCATTCAAAACAAATAGTAAGGGTGAAAATAGAAGAGGAATGGATAAAAACTGAATCgcttaatataaatatattacattatgaTGAAAAACTAATTGATACACTATTGTTaaaagatgatgatgatgatgatgttattaTGTCTACtaataaagaaattgaaaCTATTCCGGATGGTATTTcaacttataataataataatgatccGAATTGTGAAGCCGATTCCATTGATCATCAGAACAATGTCGATAACGATGATAATCGTTCCGTTGATGCAGATTTAAATGATGATAGAGTCACCGAAATTCATGGTCGACGGCCTGTACAAAAGGGTACAAAAAGaaaacgaaaagaaaatattctaataaaaaaagcGGTTGAGATTCATGAGGATGATGcatttgaaaaacaattacaaattGATCGTGAAAATGTACAAATTcgagaatattttaaaatggaTTGTGATTTATGCgatttcaaatttttaacatttctaGATGCTAAGGCACATTATCGACAATCGCATAAATGTAAAGGTTATTTATCGTGTTGTAATCGAAGGAAATTTTATCATCGTGGACATGTTTTGGATCATATCTCAAGACATCTGAATCCGGATGCATACAAATGTGAATTTTGCAATAGAATATATGCCAATAAAATTGCATTAAGAAATCATATGGAAACACATGCATCCACCGAAGAGAAACCTTTTAAATGTGATTTATGTCCAAAACGATTTATTAAACGATCTCACTTAAATCATCACAGAAAACATCGTCATTGCAAAGAAGAGGATAAAACATTTGCCTGtgatatttgtaaaaaaaatttccttacaaaatcaattttaacgTCTCACATAAGAGGAGTACATGAGAATGCATATTCACAAATTTGTGATGTATGTGCTAAGgtatttaaaactaaaaaaattttacaattacatCGAGAGATACACTTTGCCGGAAGTTCACAACCGAAATTACAATGTACAATTTGTGGTGTATGGCTAAAACATGAACAGAGTTTACGTGCCCATTTGGCAAGacataatgatataaaatataattgtccAAAATGTGGTAAGCCAGCGTCCAGTAGAAATGCACTAAATAATCATTTGCGATATGTTCATACGGAACGCAATTTTCAATGTACGTTGTGCACGAAAGCATTTAAAAAACCAATAGCGTTAAAGGAGCATATGGCATCACATACCGGCGAAGTATTGTATACATGTCCGTATTGTACGCAAACATTTAATTCCGGAGCAAATATGCATTCGCATCGtaaaaaaattcatccaaTAGAATGGGCTGCAGCTCGTGGACAACGTAAATCATCAATACACAATGTACAAATAATCAACAATGTACAAATAGATATGGCAAAGGAAAAGTTAATGACTGCCAATGTATCTGCTGGctattga
Protein Sequence: MANITESICKLCYNYNEHHIQFNDEKAIEWKVIDIIKKHFWFKIFEVDSQSNAICLECWNVTDNFNKFYNKIESAHNLNYLNIANESVINSKGGLNNNSNDKSLITKTLAKSDNNNGDDERIKNDCLQLLESVVCIDDNFVQLKDEIIGVVSNNVLESKCLGIFETAVAIPEPILITNELNDEGHHPEKTNAELRPEEMYGIGKTDIYNKKRQRGNFIALQSKTNTNRKCKQSQKKTLDNEDIVKDNVEIILQKKHIQIDQENLQIRDFFNIQCELCHCRFSTFLEITEHYRTEHNSKGYITCCKKKFFRRSLILQHIRQHSDPEAFKCCICNKLYTDNSALKTHIRSHSSGDQIKPYQCDKCDKTFVKKFQLTHHKKYRHFTEADKTFICDICNRRFLSRCYLMSHIKGVHENGNLQMCDICAKVFKSKPVLESHRQSHFVTEVKPKLQCNICGAWLKHKRSLRTHLARHKDTCRTCPQCGKETPNRDALRNHIKYVHATKLFPCNMCEKSFKKPIELKEHMASHTGEILYKCPHCTKTFNSNANLHSHRKRAHPIEWQENRGKPVINTLQIFDQNGVALNIANIIKQHFWFKFIENDGQENVICDECWIQIKAFHAFYKNVELTHNINFGHSKQIVRVKIEEEWIKTESLNINILHYDEKLIDTLLLKDDDDDDVIMSTNKEIETIPDGISTYNNNNDPNCEADSIDHQNNVDNDDNRSVDADLNDDRVTEIHGRRPVQKGTKRKRKENILIKKAVEIHEDDAFEKQLQIDRENVQIREYFKMDCDLCDFKFLTFLDAKAHYRQSHKCKGYLSCCNRRKFYHRGHVLDHISRHLNPDAYKCEFCNRIYANKIALRNHMETHASTEEKPFKCDLCPKRFIKRSHLNHHRKHRHCKEEDKTFACDICKKNFLTKSILTSHIRGVHENAYSQICDVCAKVFKTKKILQLHREIHFAGSSQPKLQCTICGVWLKHEQSLRAHLARHNDIKYNCPKCGKPASSRNALNNHLRYVHTERNFQCTLCTKAFKKPIALKEHMASHTGEVLYTCPYCTQTFNSGANMHSHRKKIHPIEWAAARGQRKSSIHNVQIINNVQIDMAKEKLMTANVSAGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -