Dfeb014770.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- -
- Assembly
- GCA_958336335.1
- Location
- OY284471.1:21503777-21506785[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.027 1.6 9.8 7.0 1 23 36 58 36 58 0.98 2 17 9.9e-08 5.7e-06 26.9 1.1 1 23 64 86 64 86 0.99 3 17 6.2e-05 0.0035 18.1 0.7 1 23 92 114 92 114 0.98 4 17 5.7e-06 0.00033 21.3 0.4 1 23 120 142 120 142 0.98 5 17 0.0049 0.28 12.1 8.0 1 23 148 170 148 170 0.99 6 17 0.01 0.57 11.1 0.6 1 23 556 581 556 581 0.95 7 17 0.034 2 9.5 4.0 2 23 586 608 585 608 0.95 8 17 0.014 0.82 10.6 1.7 1 19 624 643 624 643 0.97 9 17 3e-06 0.00017 22.2 0.7 1 23 653 676 653 676 0.98 10 17 6.8 3.9e+02 2.2 7.3 1 23 687 710 687 710 0.90 11 17 3.9e-05 0.0022 18.7 4.1 2 23 717 738 717 738 0.97 12 17 0.00024 0.014 16.2 0.1 1 23 743 765 743 765 0.97 13 17 9.6e-05 0.0055 17.5 5.5 1 23 773 795 773 795 0.98 14 17 4.5e-05 0.0026 18.5 0.0 1 23 801 823 801 823 0.98 15 17 0.00017 0.0098 16.7 2.2 1 23 829 851 829 851 0.98 16 17 0.019 1.1 10.3 1.2 1 23 857 880 857 880 0.98 17 17 0.0053 0.3 12.0 5.1 1 23 886 908 886 908 0.98
Sequence Information
- Coding Sequence
- atggaaaaacaaaacaacagcactgatgatggtgatgacggtggtggtaataataaaaaaggtGGTAAAGGTGCAAACACTAAAAAACCACGTCGTAAATCGATTTTTCCATGTACCCAATgtgataaaacatttttacataaatgttatttaacgTATCATGAACGTACCCACACCGGTGATAAACCATTTAAATGTAGTCAATGTCCCGTTAGATTTGCCGATAAAAGTAATTTACGTAAGCATATGCGAATacataccggtgaaaaaccaTTTGTTTGTGATATTTGTTTTAAGGGTTTTAATCAAATTAGTTCATTGTCGATACACAAACGAACGCACATTACCTATCGACCATTTGAATGTTCTCATTGCCAGAAGGCATTTGGTTCTAATGAAGAGCTAATTGTACATTTACGCATTCACGGTGAACGTTTACCATTTAAATGTTCCGAATGTCATTTGGAATTTCGTGAacattgtaatttaaaatcacatataaaaatgcatatggAAACATCACCATCACTATATCGAACAATTACAATACGAACATTTAACAATGGCAATGACCAATCGGTAACGGAAACAAATGAGAAACCAACAGAAACggaaatattattgaatagGGAAAATCAATCATTTATTGAAACTATTCCCaatacaaagaaaaaagcaaaattaaaaaaaccagTTAAATTATCACCAGttaaattaatagaaaaagcATTACCGGTGGTTGTTAACCAAGAAGaatgtaatataattgatGATCTAAATGATTTACCACCATACCCATCGCCACCACTACCATCACCAGCACCACCATCACTACCACTACCATCGCCACCACTACCATCGCTACCACCACCAtcgccaccaccaccatcgccaccaccaccatcgctaccaccaccatcaccaccatcaATCATAATtgataatgaattaataataaaagaggAAGACGCAATCCAACCGTACTACGATGAATCAGAAGTAAAATTTGATTGGTATAATGTTGCCAATCCAAGTATAAATAACGATCAAGAAAATGAACAACAAAACCAATCCTCCAATGTCTCCAAAAATAACGACAAACCATTTAAAGTCGAACCATCACCGatgaataatgatgatgatcagATGATGGTTGATGATGACAATGAAAATTCTAATGATAATGATCATTTTAATACAATGGACAGTATgtttgatgatgataattcTCGTGATAGTATTCCAATCCAACCCGTAGAAAATCAAGTttttataaaaccaaaattagaatttccatttgataaagaattaaaaattatattacataaaattaaattaccaattgttaaacgtaaaactataaatgttcataatttatcaattaaattaaaagatttaacgacacaacaatatttttgtcGAATAGTTACAGAAAAATCATCAACGAATAAAAGCccaataaaatcaaatacgAAAAAGAAAGTCCGAACACAGAAGAATAAAAAAGTCATaataaagaagaagaagaaaaagcTGTCAAATAATAATCGTAGAAAATCAACGAAacgaaaaattgaaaatcgtTTACAAACTGAACCAATTATCAGTGATAATAAAACCATTCCAAATCCAAACAATTCTTTAAAAATCGATTTACctttaaaatacaattgtcCGGAATTGAATTGCCAACGAAAATATCAAACATCACAAGGATTACAACGTCATCTTTTGCTTACCCATAGACAAAGTCTAAAATGTTCAATATGTAATGAAATTCTGCACCGTAAAACAAAACTCATTCATCatatgaaagaaaaacattcaatagtaatggaaaagaaaaaatataaacgtCACGGGACCGCATTCAAATGTACAACGGGTTGTCATCAAACATTTAAAAACGCTCAACAGTTAAGCGAACACGattgtttatttattcgtGTAAAATCTTACATATGtgatatttgtaaaaaatcattttattcaaaagatCAAATTAGAGCGCATTTACGAACGGTACATACTAATTTGGAAATGTTTAAACGTCATCTGTATAAATGTTCCGTTtgtaataaatcaaaattaatgtACAAACATCAATTTACTAGACATATGAAAGTGCACGGTCTCGAACGTAATCGAGAATGTAATGAATGtggtaaaaaatttaaaaccaccggtcatttatataatcataaaaaaactCATTTAACAGAGTTATTTAAATGTGCCTATTGTGGTAAAGGTTTTAAAATAATCGGTAATTTACAAATTCATGAAATACGTCATCGTGTTATGGAACATCCAAAATTTGAATGTACCATTTGCcgaaaacaattttcatttaaacataaattaacGTATCACATGCGAATACATACCGGTGAACGACCATATGCATGTCCAATGTGTCCGGCACGTTTTGCCGATGGCAGTAATTTACGTGCCCATAAACGTattcataccggtgaaaaaccatttaaatgtCTTACATGTAGTAAAACATTTAATCAATTGGGTTCATTGAATATCCATAAAAAAAGTCACGTTGAATATAAACCATTTCGATGTGATCGGTGTGGAAAACGGCAAACATCCGAATTAGATTTAATAACACATTTACGTAAGCGTCACGGTGATCGTCGATTATTTAAATGTCGTCTGTGTGATCGTGAATTTGAAcaattatgtaattataaatcaCATCGACGTTTACATTACGGTAAGGAATTGACAAATGccgaaaaaaattatcgtaaTAAATGGGAATCAATTGAATCATCCGTTCCCACACATTTATTACCATTGGATTTTGCACAAGGTCCAGCACCGTTGCCAGCCGCATCACTTATATTCTTTCCACCAGAATTTCAAACATTGCCATCATCAACATTTACAggtgctgctgctgctgctactGCTACTGGTACTGGTACTGAAGGAGAATTTACTGTATATCAACAATTACCATTAATTAcatatgatattaataatttaaaataa
- Protein Sequence
- MEKQNNSTDDGDDGGGNNKKGGKGANTKKPRRKSIFPCTQCDKTFLHKCYLTYHERTHTGDKPFKCSQCPVRFADKSNLRKHMRIHTGEKPFVCDICFKGFNQISSLSIHKRTHITYRPFECSHCQKAFGSNEELIVHLRIHGERLPFKCSECHLEFREHCNLKSHIKMHMETSPSLYRTITIRTFNNGNDQSVTETNEKPTETEILLNRENQSFIETIPNTKKKAKLKKPVKLSPVKLIEKALPVVVNQEECNIIDDLNDLPPYPSPPLPSPAPPSLPLPSPPLPSLPPPSPPPPSPPPPSLPPPSPPSIIIDNELIIKEEDAIQPYYDESEVKFDWYNVANPSINNDQENEQQNQSSNVSKNNDKPFKVEPSPMNNDDDQMMVDDDNENSNDNDHFNTMDSMFDDDNSRDSIPIQPVENQVFIKPKLEFPFDKELKIILHKIKLPIVKRKTINVHNLSIKLKDLTTQQYFCRIVTEKSSTNKSPIKSNTKKKVRTQKNKKVIIKKKKKKLSNNNRRKSTKRKIENRLQTEPIISDNKTIPNPNNSLKIDLPLKYNCPELNCQRKYQTSQGLQRHLLLTHRQSLKCSICNEILHRKTKLIHHMKEKHSIVMEKKKYKRHGTAFKCTTGCHQTFKNAQQLSEHDCLFIRVKSYICDICKKSFYSKDQIRAHLRTVHTNLEMFKRHLYKCSVCNKSKLMYKHQFTRHMKVHGLERNRECNECGKKFKTTGHLYNHKKTHLTELFKCAYCGKGFKIIGNLQIHEIRHRVMEHPKFECTICRKQFSFKHKLTYHMRIHTGERPYACPMCPARFADGSNLRAHKRIHTGEKPFKCLTCSKTFNQLGSLNIHKKSHVEYKPFRCDRCGKRQTSELDLITHLRKRHGDRRLFKCRLCDREFEQLCNYKSHRRLHYGKELTNAEKNYRNKWESIESSVPTHLLPLDFAQGPAPLPAASLIFFPPEFQTLPSSTFTGAAAAATATGTGTEGEFTVYQQLPLITYDINNLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00451224;
- 90% Identity
- iTF_00451224;
- 80% Identity
- iTF_00451224;