Basic Information

Insect: Dilophus febrilis
Gene Symbol: -
Assembly: GCA_958336335.1
Location: OY284472.1:19982052-19987443[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.69 39 5.3 1.3 1 23 302 324 302 324 0.96

2 21 0.023 1.3 10.0 0.5 2 23 331 352 331 352 0.95

3 21 0.39 22 6.1 0.3 5 23 361 380 359 380 0.92

4 21 0.0029 0.17 12.8 1.1 1 23 386 408 386 408 0.97

5 21 3.4e-05 0.0019 18.9 1.6 1 23 414 436 414 436 0.98

6 21 0.0013 0.076 13.9 0.6 1 23 442 464 442 464 0.98

7 21 0.028 1.6 9.8 0.9 1 16 470 485 470 487 0.89

8 21 0.24 14 6.8 0.1 1 23 512 534 512 534 0.95

9 21 0.00066 0.038 14.8 0.1 2 23 541 563 541 563 0.96

10 21 0.0099 0.57 11.1 0.5 5 23 572 590 569 590 0.94

11 21 8.6e-07 4.9e-05 23.9 0.9 1 23 595 617 595 617 0.97

12 21 0.00054 0.031 15.1 2.3 1 23 623 645 623 645 0.97

13 21 1.1e-05 0.00066 20.4 0.9 1 23 651 673 651 673 0.98

14 21 0.048 2.7 9.0 1.7 1 15 679 693 679 693 0.92

15 21 0.0026 0.15 13.0 0.1 1 23 877 899 877 899 0.98

16 21 0.0013 0.077 13.9 0.1 2 23 906 928 906 928 0.96

17 21 0.012 0.68 10.9 1.3 5 23 937 956 934 956 0.92

18 21 0.00054 0.031 15.1 0.2 2 23 962 983 961 983 0.96

19 21 0.00096 0.055 14.3 3.5 1 23 989 1011 989 1011 0.97

20 21 1.7e-06 9.9e-05 23.0 0.5 1 23 1017 1039 1017 1039 0.98

21 21 4.2e-07 2.4e-05 24.9 1.8 1 23 1047 1069 1047 1069 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.69	39	5.3	1.3	1	23	302	324	302	324	0.96
2	21	0.023	1.3	10.0	0.5	2	23	331	352	331	352	0.95
3	21	0.39	22	6.1	0.3	5	23	361	380	359	380	0.92
4	21	0.0029	0.17	12.8	1.1	1	23	386	408	386	408	0.97
5	21	3.4e-05	0.0019	18.9	1.6	1	23	414	436	414	436	0.98
6	21	0.0013	0.076	13.9	0.6	1	23	442	464	442	464	0.98
7	21	0.028	1.6	9.8	0.9	1	16	470	485	470	487	0.89
8	21	0.24	14	6.8	0.1	1	23	512	534	512	534	0.95
9	21	0.00066	0.038	14.8	0.1	2	23	541	563	541	563	0.96
10	21	0.0099	0.57	11.1	0.5	5	23	572	590	569	590	0.94
11	21	8.6e-07	4.9e-05	23.9	0.9	1	23	595	617	595	617	0.97
12	21	0.00054	0.031	15.1	2.3	1	23	623	645	623	645	0.97
13	21	1.1e-05	0.00066	20.4	0.9	1	23	651	673	651	673	0.98
14	21	0.048	2.7	9.0	1.7	1	15	679	693	679	693	0.92
15	21	0.0026	0.15	13.0	0.1	1	23	877	899	877	899	0.98
16	21	0.0013	0.077	13.9	0.1	2	23	906	928	906	928	0.96
17	21	0.012	0.68	10.9	1.3	5	23	937	956	934	956	0.92
18	21	0.00054	0.031	15.1	0.2	2	23	962	983	961	983	0.96
19	21	0.00096	0.055	14.3	3.5	1	23	989	1011	989	1011	0.97
20	21	1.7e-06	9.9e-05	23.0	0.5	1	23	1017	1039	1017	1039	0.98
21	21	4.2e-07	2.4e-05	24.9	1.8	1	23	1047	1069	1047	1069	0.97

Sequence Information

Coding Sequence: ATGgatgatgatgatgatgatgatttgaTCATGAATATCAACAATATTTGTCGTGCCTGTTTATCTACGGAAATGGATGTTAAAaTGATCACATTTAATGATGGTTTATCATCAGTGATATGTTGCAAATGCATggataaattaaaagaatttaatgaatttaaaattaaatgtattcaatcaaatgaaatattattattgaagaGAAAACGGTTAGTGGGATTGAGTGCTGCTGAAATAAAATCCGAAACTTATGTTCATAAACTATCAATTATTGTTAGGAATATGAAAAGGgcacataataatataatattacctaataatagtaataataatattaataataattataatgaatgcAATAATGTAGAAAGTGTAATAAAGTATGCCAAATCCACGTCGACCTCAATAATACCCTTAAATAATCCGATTAACGaacaaattaatcaatttagTCCGAAAGAAAATACAGAAATATTACCAAATTCAAATCAACAGGAAGCAACTGGTGTTAATGGAAAATTGCCAATTTTAAATCAGCAAGAAGAAACGACTAATGCTGAAAAATGCCAAAATTTAAATCAGCAAGAACAAACGGCGAATGTTGAAATACTGCCAAATTCAAATCGGCAAGAAGAAACTactaataatgaaaaattatcaaatcaaattgatTTGCAACAGgaaaaaaccaataataataatgaaaatttatcaaattctAATCAACCAGAAGAAACTAATGAAACAATAAACCTTGATCAGATTGATGAGACAGCAAGAATGGATACTattaaaatccaaaaaaataaaaaacggatattaatgaaattaaaaaaatcatttccaATGAAACggaaacaaataaaaaagaaaatcaaaattcgTAAACAAGATTATCCGTACGTATGCAAAGAATGTGAAACTGGATTTTTACATAAAGAAAAGTATGATGGGCATTTAAGAGAGCATGCAggaaaaaagCCAGCTGTTTGTGAATATTGTGGTGGTGAATACACTTGGCATTATCTGTCTAAACACATGGAACGTGAACATAAAGAACACATAATCTATAAATGTTATTGTGGAAAAACATTTGCCTATGAAAGTATATTGATTCAACATAAAAGTTCAGTACATGGTAATAacaattcattcatttgtGAAACATGTGGAAAATcattttatgcaaaatttaaattgGATAATCATTCCTTAACACATACAAAAGAAACACCTTATGTGTGTGATCAATGtggtaaaaaatttaaagcTAAATACggattaaaaaatcatttatttagaCATCAAAATATTCGTAATCATAAATGTAATTCATGTGGAAAAGCATTAATGACTGATGCAGAATTGCGAGTTCATTTACGCAGTCATATTgatgtattaaattttgaatgtaAAGTATGTGAAAAGCGTTTTCGACATCAACAGCAAGTAAAAAATCGTAAGTTAATTGAGAGCGCTATTAATAAGGTTTTGGCTGAAGTACAGACTCGAGCCAGACAAAATTTCCCATATGTTTGTAATGATTGTGATGCTGGTTTTTTATATCAAGAAAGATTTGAAGGACATTTAAGGGAACATGAAGGGAAAAAGgccGCAGTTTGTGAACTTTGTGGTAGTGAATATTCTGGATGGTCTTATCTCCGAAAACACATGGAACGAGAACATAAAGAtgatatgaaatataaatgtcATTGTGGTAAAGCATTTGCCTATGAAAGTGGATTGATTGCGCATAAAGTTACACATGAACGACCATCGTACATTTGTGAAGAATGTGGAAAAtcattttatgataattatcaattgaataAACATTCCTTAACACATAAAACCGAAACACCATTTGAGTGTGATCAATGTGGTAAAAAGTTTAAAGCTGAATATCGCTTAAGAAATCATCAATTCCGGCATAAAAATATACGTGATTTTAAGTGTAATACATGTGATAAGGCGTTTATAACCGGTTCGGAATTACGAGTACATTTTCGTAGTCACAGTGATGTATTCaattttgattgtaaaataTGTGAAAAACGTTTTCGACACAAATCTCAAGATGCCTTTCAATCGTTAACAAATCTTAAAGTATCACAAAACGATGGATTACCGACAAAAATTTGTCAAAATTGTACAGATAAATTGTGGCAATTTAATGAATTCAAATTACAATGTATAAAATCGGATGGAATACTAAAAAATGAACGACGAATATCTTCGACTTCATTATTGCATGCTTGTGTTAACGATAAGAATGATGACAAAATCACAGCACCAGCAGATGTTGAAAATGAAGTAATTGATCCTTTGGATAATAAAATGCAGAATATCtgtgatgatgattatgatgatgatgaagatgatgctGTAGAAGATGATGATTTATTACTAACATCTGAATTAAATAcaactgatgatgatgaggatcTTATTGATGATTCTGATTATGATGACGAAGAAAACCTAACAAAAagtacaataaaattattaaataccGTTGTTAGCCCAAGTGATAATAAGAATAAGGAAACGTCTACAGTGGTAGACGTTAATAAAGACGAGGCTGCCAAATGTTTAGCAAGAAataatCGAGTGATTAATTTTCCCTATGTGTGTAATGAATGTGGTGCTGGTTTTGTGTATCAAGAACGATTTGAGGGGCATTTAAGGGAACATGAGGggaaaaagGCTGCAGTTTGTGAATTTTGTGGTAATGAATATTCTGTATGGTCTTATCTACGAATACACATGGAACGAGAACATAAAGATGATATAAGATATAAATGTCATTGTGGTAAAACATTTGCCTATGAAAGTGGATTGATGGCACATAAAAGTAGTTCACATGGAAGAAGTTCACTCATTTGTGAAATATGTGGtaaatcatatattgaaaaatatttattggaTaaacaTTCATTAACCCATAAAACAGAGACACCATTTGAATGCGATCaatgtgataaaaaatttaaaaccgAATATCGTTTAAGAGATCATAAGTTTCGACATAAAAATATTCGTAATCATAAATGTGATGTATGTGGAAAGGCATTTATTACCGGCTCAGAATTACGTGTTCATTTACGTAGTCACAGAAGTGTGGTGGcattaaattttgattgtaaattATGTGGACAACGCTTTCGTCGCAAAGCCCAATTAACTATACATATGCGTaaacataacaataataataataataatccaccgaatatataa
Protein Sequence: MDDDDDDDLIMNINNICRACLSTEMDVKMITFNDGLSSVICCKCMDKLKEFNEFKIKCIQSNEILLLKRKRLVGLSAAEIKSETYVHKLSIIVRNMKRAHNNIILPNNSNNNINNNYNECNNVESVIKYAKSTSTSIIPLNNPINEQINQFSPKENTEILPNSNQQEATGVNGKLPILNQQEETTNAEKCQNLNQQEQTANVEILPNSNRQEETTNNEKLSNQIDLQQEKTNNNNENLSNSNQPEETNETINLDQIDETARMDTIKIQKNKKRILMKLKKSFPMKRKQIKKKIKIRKQDYPYVCKECETGFLHKEKYDGHLREHAGKKPAVCEYCGGEYTWHYLSKHMEREHKEHIIYKCYCGKTFAYESILIQHKSSVHGNNNSFICETCGKSFYAKFKLDNHSLTHTKETPYVCDQCGKKFKAKYGLKNHLFRHQNIRNHKCNSCGKALMTDAELRVHLRSHIDVLNFECKVCEKRFRHQQQVKNRKLIESAINKVLAEVQTRARQNFPYVCNDCDAGFLYQERFEGHLREHEGKKAAVCELCGSEYSGWSYLRKHMEREHKDDMKYKCHCGKAFAYESGLIAHKVTHERPSYICEECGKSFYDNYQLNKHSLTHKTETPFECDQCGKKFKAEYRLRNHQFRHKNIRDFKCNTCDKAFITGSELRVHFRSHSDVFNFDCKICEKRFRHKSQDAFQSLTNLKVSQNDGLPTKICQNCTDKLWQFNEFKLQCIKSDGILKNERRISSTSLLHACVNDKNDDKITAPADVENEVIDPLDNKMQNICDDDYDDDEDDAVEDDDLLLTSELNTTDDDEDLIDDSDYDDEENLTKSTIKLLNTVVSPSDNKNKETSTVVDVNKDEAAKCLARNNRVINFPYVCNECGAGFVYQERFEGHLREHEGKKAAVCEFCGNEYSVWSYLRIHMEREHKDDIRYKCHCGKTFAYESGLMAHKSSSHGRSSLICEICGKSYIEKYLLDKHSLTHKTETPFECDQCDKKFKTEYRLRDHKFRHKNIRNHKCDVCGKAFITGSELRVHLRSHRSVVALNFDCKLCGQRFRRKAQLTIHMRKHNNNNNNNPPNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -