Dfeb018069.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- -
- Assembly
- GCA_958336335.1
- Location
- OY284472.1:33862033-33863352[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.8 2.2e+03 -0.9 0.4 16 33 32 51 23 55 0.79 2 13 0.16 93 3.6 2.7 11 33 56 79 50 88 0.72 3 13 4.2 2.4e+03 -1.0 7.2 14 29 86 101 78 112 0.74 4 13 0.0011 0.61 10.5 0.6 18 38 118 135 112 135 0.91 5 13 0.00012 0.072 13.5 1.1 17 38 145 163 137 168 0.86 6 13 0.0018 1 9.8 0.3 17 38 173 191 165 192 0.90 7 13 0.0011 0.63 10.5 2.9 1 38 186 219 186 220 0.82 8 13 0.052 30 5.1 0.1 18 38 230 247 222 252 0.80 9 13 0.22 1.2e+02 3.1 1.8 17 38 257 275 242 275 0.77 10 13 0.00013 0.077 13.4 2.1 1 38 270 303 270 309 0.89 11 13 0.058 33 5.0 0.5 14 33 328 348 319 356 0.75 12 13 0.28 1.6e+02 2.8 4.4 14 36 355 379 348 380 0.74 13 13 0.82 4.7e+02 1.3 0.1 17 29 416 428 409 434 0.79
Sequence Information
- Coding Sequence
- atgaatttgaataataaagaCAATGATAAATATGCACAAGTTCATGCCCATTCTAGTAGTGAACTACTTGATGATcgaaattctaaaaatatagtatttcAATGTGATGTTTGTTGTACTGAATATCAAAACAAAGCCGATCTTAATACTCATATTGCTAGTAATGACAAGTGCACaaagatattttattgtgaTATTTGTGAAAATACTTTCGAAATCAAACTTTTACTTATTTCTCATATGGATGGTCATGAAAAACATCACTTAGAATGCAAATATTGTaggaaattatttaaatgccATTCGAcattaaaaatacatgaaCGTATGCATAATGGTGATAAACCATTTGTTTGCAAATATTGTCAGAAAGCATTTAATAATGTATCAAATTTAAATCGTCATGAACTTATCCATTCTGGTGATAAACCATATGTTTGTAAATATTGTCAGAAAGCATTTAATCGATCCTCAAATTTAAAAACTCATGAACTTATCCATTCTGGTGATAAACCATATGTTTGTAAATATTGTCAGAATGCATTTAAATATCCATCAAATTTAAAACGTCATGAACTTATCCATTCTGGTGATAAACCATATGTTTGTAAATATTGTCAGAAAACGTTTAATCAATCATCAAGTCTAAAACGTCATGAACTTCTCCATTCTGGTGATAAACCATATGTTTGTAAATTTTGTCCGAAAGCATTTAATCAATCATCAAGTTTAAAAACTCACGAACGTATTCATTCTGGTAATGGACCATATGTTTGTAAATTTTGTCAGAATGCATTTAAATATCCATCAAAGTTAAAACGTCATGAACTTATCCATTCAGGTGATAAACTATATGTTTGTAAATATTGTCCAAAAGCATTTAATCAATCATCAAATTTAAAACGTCATGAACTTATCCATTCTTGTGATAAAccatatttgaataaatattgtCCGAAAGCCAGTCACATAGCCAGTAATGACAAGACATTTTATTGTGATATTTGTGAAAATACGTTCCAAAACAAACTTTTACTTATTTCTCATATGGATGGTCATGAAAAACATTACTTAGAATGCAAATATTGTAGGAAATTATTCAAATGCCATTCGGCATTAAAAACTCATGAACTTATCCATTCTGATGATAAACCATTGTCTAGTGCTAATTGCAATGAAAAcgtaataaataaatccatCGTTTTAAAAGATGATGAAAGCAATAATACTGATGCTAATAATCCATTTGTTTGCAAATATTGTccattaacatttaataaaaaaaaatcattggcTATTCATGAAGAACAAGCACATTAg
- Protein Sequence
- MNLNNKDNDKYAQVHAHSSSELLDDRNSKNIVFQCDVCCTEYQNKADLNTHIASNDKCTKIFYCDICENTFEIKLLLISHMDGHEKHHLECKYCRKLFKCHSTLKIHERMHNGDKPFVCKYCQKAFNNVSNLNRHELIHSGDKPYVCKYCQKAFNRSSNLKTHELIHSGDKPYVCKYCQNAFKYPSNLKRHELIHSGDKPYVCKYCQKTFNQSSSLKRHELLHSGDKPYVCKFCPKAFNQSSSLKTHERIHSGNGPYVCKFCQNAFKYPSKLKRHELIHSGDKLYVCKYCPKAFNQSSNLKRHELIHSCDKPYLNKYCPKASHIASNDKTFYCDICENTFQNKLLLISHMDGHEKHYLECKYCRKLFKCHSALKTHELIHSDDKPLSSANCNENVINKSIVLKDDESNNTDANNPFVCKYCPLTFNKKKSLAIHEEQAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00451256;
- 90% Identity
- iTF_00451237;
- 80% Identity
- iTF_00451237;