Dfeb004952.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- -
- Assembly
- GCA_958336335.1
- Location
- OY284468.1:61519153-61526594[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-08 0.00012 22.1 0.2 7 37 166 196 163 201 0.86
Sequence Information
- Coding Sequence
- atgagttCACGAAAAAAGGGACGTAAATGTTCAATGAAATATTGTGATAGCTTTCAACATACCCATAATCATTTAAGTTTCTTTCGTTTTCCCAAAGATCCAGAAAGATCAAAATTATGGATTGAAAATAGTTCTCGACCggatttaattgaaaaaattagtGTACATGAAGATCGTGTATGTGAATTACATTTTGAAAATCATATGTTTATAAGTAATTATCGTAATCGGTTACAAGCACATGCCGTTCcagtattatatttaaatggaccaccaccaccacgaCCAATGATACCGCCGACAACTGGACGTCAAATGATGtcacaacaacatcaacaacaacagctATCGTCTTTACAACCACCATCACAAATACAACCCCAATTACAACCCCAACCACCCACAAAACGGCGACACGTTGTGATGGATGTACAAGAAATACATGATTTCCAGAGAAGACCTGCACGTTCAGCAACCATGGAACAAGCATATATGGAAGCGGCCGCTGAAATTCGCAAAACAGGAGCATCATTTCGTAAGGCGGCCGAAAAATTTGGTGTCAATTATGTTACATTAAGAAGATACTGTGCACGTATATCAAAACCACAAAATATGTCACATCAAAATTTAgATAATCCTCATAACATTCAACATCAACAGCAAAAtaatcaacatcatcaacagcaaaataatcaacatcaccaacaaaataatcaacatcaacaacaaaataatcaaCATCAACAGCCAAATAATCATTATCAATTAAATCGGCAACAACAAAGacagcaacagcagcaacagcaacgtcatcaacaacaacaacaacaacaaccacgAAAAATCCTATccaaaaatcaattattaaatccACAGCAACAAATACTACAGCAACGTCAACTTTTACAGCAACAACAGTTACAAAAACAACTATATTTACaaagtttaacaaaaaatttatcacCGTCCACATCGTTAACAGCAACACCACTACTTAATATGACGAACAATGACAATGACGACAATAACCATAACCATAATCATAACAATTATGGcaacaacatatatatgaattcacaaaattcaatatcattattacagggaaatcatttaaaaaatactaatACATTATCTCTTCCATCACCATCATCAACGTCGCCAACGGCATCGCCAATAACAATAACACAtgcaacagcagcagcagcagcagcagcaaccccaacagcatcatcatcatcatcatcgtcttCCGCTGCggccgccgccgccgccgcctCCTATAAACGTCCTCGCCAAATATTTTCAGTCGAACAGGAAGAAGAATTAGCCGGTTATGTACAAGATACATCGAATTATTATAATGGATTGTCATCGAAAGATGTACGTACATTGGCATTTGTTTATGCATTATGTAATCAAGTGGAAATACCACCGGGTTGGCGTGAAACCTATCAAGCATCATTTGATTGGTGTTTAGGTTTTATAAAACGTAATAAATTGGCATCGATGATTGTAACCGGTCATagtgcatataaaaataataataataatggtggTGTTCCGTATCCATCATCAATAGCTGGTGTTGCTCTGACACCATCGTCAACATCAAAAATGCACATTGATAATGGATCACCATCGAAATCGGGCACAACCCCAACAACTAATGGTAATGgtttatcaaaatcaattcTTCCCGAAGTATCAcccattttaaataatcatcataatacaAAACATCATAAATCATTACTCAATAATGAATcacaaaataatcataataataataatattattgaaacaattgaattatag
- Protein Sequence
- MSSRKKGRKCSMKYCDSFQHTHNHLSFFRFPKDPERSKLWIENSSRPDLIEKISVHEDRVCELHFENHMFISNYRNRLQAHAVPVLYLNGPPPPRPMIPPTTGRQMMSQQHQQQQLSSLQPPSQIQPQLQPQPPTKRRHVVMDVQEIHDFQRRPARSATMEQAYMEAAAEIRKTGASFRKAAEKFGVNYVTLRRYCARISKPQNMSHQNLDNPHNIQHQQQNNQHHQQQNNQHHQQNNQHQQQNNQHQQPNNHYQLNRQQQRQQQQQQQRHQQQQQQQPRKILSKNQLLNPQQQILQQRQLLQQQQLQKQLYLQSLTKNLSPSTSLTATPLLNMTNNDNDDNNHNHNHNNYGNNIYMNSQNSISLLQGNHLKNTNTLSLPSPSSTSPTASPITITHATAAAAAAATPTASSSSSSSSAAAAAAAASYKRPRQIFSVEQEEELAGYVQDTSNYYNGLSSKDVRTLAFVYALCNQVEIPPGWRETYQASFDWCLGFIKRNKLASMIVTGHSAYKNNNNNGGVPYPSSIAGVALTPSSTSKMHIDNGSPSKSGTTPTTNGNGLSKSILPEVSPILNNHHNTKHHKSLLNNESQNNHNNNNIIETIEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00451044;
- 90% Identity
- iTF_00451044;
- 80% Identity
- iTF_00451044;