Basic Information

Gene Symbol
kn
Assembly
GCA_958336335.1
Location
OY284472.1:29615122-29622134[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-109 2.1e-105 353.6 0.0 205 381 1 203 1 207 0.99
2 2 4.5e-07 0.0035 16.1 12.0 425 500 208 290 205 322 0.69

Sequence Information

Coding Sequence
ATGAGACGTTTTCAAgtagTTATATCAACACAAGTGGCGGTCGATGGACAATTAATGGCAATTTCCGATAATATGTTTGTTCATAATAATTCAAAACATGGACGACGTGCAAAACGTTTGGATACAACGGAAGGTACAGGATCCCCATTGTCAATATCGGGTCATGCTTTATCTCCGGACAGTACGTACGACGgtcTTTATTCACCATTACCAGTATCACCATGCATAAAAGCCGTATCGCCCAGTGAAGGATGGACAATTGGTGGAGCTACCGTTATTATAATTggtgataatttttttgatggtTTACAAGTTGTTTTTGGTACTATGTTAGTATGGAGTGAGtttattacaCCACATGCAATGAAAGTTCAAACACCACCAAGACATATGCCCGGTGTTGTTGAAGTCACCCTATCATATAAGGCTAAACAATTTTGTAAAGGTTCACCGGGacgttttgtttatatttCCTTAAATGATCCAACAATTGATTATGGTTTTCAACGTTTACAAAAATTGGTACCTAGACAATATGGTGATCCGGATAAATTATCCAAAGAGATTATATTAAAACGGGCTGCCGATTTGGCTGAAGTATTTTATGAGTAcaaACCTCCCGGTTTAAATGGTTATGCAGGTCAATTATCAGTTAGCGTACAAGATACAAATACACAATGGACCGAAGttacaGACGAATACCAAAGAACACAAAGTAGTAGTGTAAGTCCAAGAGGTGGATATTGTAGTAATACATCAACACCGCATTCATCCGGTGGCGGTTCATATGGTGGTAGTACCGGAAATGGTTATGGAACAACAAATATGGGAACGTTAACATCAACACCGACCAGTGTGTTTAATTCAACATCGAgagTTGGAGGTTTAGTTAGCGGTTTTAATCCATTTTCATTACCAACATGTAATACACAAGGTTATGCTCCTAGTCCATCAATAGcatcatcaaaataa
Protein Sequence
MRRFQVVISTQVAVDGQLMAISDNMFVHNNSKHGRRAKRLDTTEGTGSPLSISGHALSPDSTYDGLYSPLPVSPCIKAVSPSEGWTIGGATVIIIGDNFFDGLQVVFGTMLVWSEFITPHAMKVQTPPRHMPGVVEVTLSYKAKQFCKGSPGRFVYISLNDPTIDYGFQRLQKLVPRQYGDPDKLSKEIILKRAADLAEVFYEYKPPGLNGYAGQLSVSVQDTNTQWTEVTDEYQRTQSSSVSPRGGYCSNTSTPHSSGGGSYGGSTGNGYGTTNMGTLTSTPTSVFNSTSRVGGLVSGFNPFSLPTCNTQGYAPSPSIASSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01168190;
90% Identity
iTF_00450732;
80% Identity
iTF_00450732;