Basic Information

Insect: Diloba caeruleocephala
Gene Symbol: -
Assembly: GCA_947459985.1
Location: OX381627.1:3165034-3182572[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6e-06 0.00049 20.9 1.9 1 23 263 286 263 286 0.96

2 9 0.0021 0.18 12.9 6.7 1 23 293 315 293 315 0.98

3 9 0.0001 0.0084 17.0 3.0 2 23 347 368 347 368 0.98

4 9 9.4e-05 0.0077 17.1 0.7 1 23 372 395 372 395 0.96

5 9 0.084 6.9 7.9 0.6 2 20 412 430 411 432 0.93

6 9 0.31 25 6.1 6.2 2 23 495 517 494 517 0.88

7 9 2.3 1.9e+02 3.4 0.0 1 23 529 550 529 550 0.84

8 9 0.025 2 9.5 2.0 1 23 556 578 556 578 0.97

9 9 2.1e-05 0.0017 19.2 2.5 1 23 584 607 584 607 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6e-06	0.00049	20.9	1.9	1	23	263	286	263	286	0.96
2	9	0.0021	0.18	12.9	6.7	1	23	293	315	293	315	0.98
3	9	0.0001	0.0084	17.0	3.0	2	23	347	368	347	368	0.98
4	9	9.4e-05	0.0077	17.1	0.7	1	23	372	395	372	395	0.96
5	9	0.084	6.9	7.9	0.6	2	20	412	430	411	432	0.93
6	9	0.31	25	6.1	6.2	2	23	495	517	494	517	0.88
7	9	2.3	1.9e+02	3.4	0.0	1	23	529	550	529	550	0.84
8	9	0.025	2	9.5	2.0	1	23	556	578	556	578	0.97
9	9	2.1e-05	0.0017	19.2	2.5	1	23	584	607	584	607	0.97

Sequence Information

Coding Sequence: ATGTCAGAGTTAAAAGTATGTAGAATTTGTCTTCGAACTGAGGCAAAGATGTACCATTTTAATCTGTATCAACTTAAATTCTATTACGAAGAAGTTATGGCTTTAAAAGTGAACGAGAATGATGGTCTACCTCAACACTTCTGCTATGAGTGTGCAACAATACTACACAAGTTCCATAAGTTTAAGGAGAAGTGCCACAGTGGGCAGAAAGTTCTTAGGGACCTGCTGTGGAGGGGACCGATCACTTATGCCTCCATTTACAAAGTAGATCGTAATGACACAATACTGAAGTCACCAATAACAGTTATCACAATCAGTGAACGTGTTAAAACCTACATCACAAAAGATAGCATAGAAATAGATGAAAATTTCGAACATGAAAAAAAAGTAGTAGAAAAGATAGAAAATATAGAATTAGAATACTTTAGCGATGCCTCTATGACAGATAGAGAAGATCAGGACCCAATAAACAATGTAGTTGACAGTGAAAAGATAATTGAAGAAGTCGAGACAGCATTTGGGGAAGAAAAGATAAAGGTTGATGAAAAAAACGATTTAGAATCTTTTAGTCCAGCTGCAGTTTATGTTGAAGGTGAAAAAGGTATAATGAAGGTAAAATGTGAAGAAATTAAAGAAAAAAAGAAACATAGTCACGAAAAAGGGTGGTTTTCGGGTGTCAAGAAAGTATTAGAGAGTCGTCATTGGAAGAGGTTTATTTTGAGTGAAGAGGAAGCTATAAAGAACTTTAGATCTAGAGCTGAGGATAGAAAGTATGTCGAGGCCACTTTCAAGTGTACAGACTGTTTTAAAGGCTTTTCGAAGAAGGATATGTTAAATCGACACATTCTGTTAAGACATGTTAAGACGCTGGGTCCCTACGAGTGTCGATTCTGCCGCATGCGGTTCAAATTGAACTGTAACTTGCGGAAGCACATGAGACAGCATTACACAAAGTTTGAGTGTTTAAGGTGTCACCTAATCTGCCCTTTAGAAAATACGGCTCTACTTCACGACGAGTACCACAGTGGGGTGACAAGGAAATGTGTCTATTGCGATGAGGAATTCAGACATTCGTCAACGTACTACACGCATTTGCGCACGCACCGCAGCGAGCACGTCTGTACGCTGTGCGGCGCCTCCTTCGTCAGTAAGATCGGGTTGCAACAGCATAAGAGGGTCAAACATGTTATTATTGACATTGAAAGTCCAGACGACGACGAAGAAGTGAACACGTACTGCGAGCGATGCGACATCAGGTTTGAGACGCGGAAGGCTTACGAGGAACATTTGTTTCATTCAGCTCTTCACAGTGAAGGAGAAGGTAATTTTACAAACGAAAAGAACAGGAAAGTACTAGGGAAAAAGGAACAGGCAAAGATCACGAAACAGTTAAGGAAACGAAGCACAGATGAAGAGGTATTCAAGACGGCGCATAACCTCAAAAGAAAGAAGAAACCTAGAAGAAAACATAGGAAACCCACAACGTGTCACCAATGCGGCAAACATTTCGACACTCAAGTGGCGTGTTGGAAGCATCACTTAGCCGAACACCCTCGTACTTCGTTTTACGCGCCAACCGAGCGGTACATCTGCGAGATATGCGGGTCTTCACTTGCTCCAGGCAGCATCGCCAACCATCAGAACATGCACACTCGAGAGAAGTTGCATACATGTGACACATGCGGACGACAGTTCCACGCGATCATAGGACTCAAGCGGCATCTCGTGACGCACACAGGAGAGAAACCTTACGCGTGTTCGTTGTGCGACAAACGCTTCACACAGAGCAACAGCATGAAGCTCCATTACCGCACGTTCCATCTGAAGCAACCTTATCCTAAGAGAAACCGAAGAAAAAACAAAGATGACCCAAAAACAGCAGAAGCAGAAGAATCGAACAGCGAAGAAGATTCAGACGACAGTCTACCTGACATTGAGCCTGAGATGGAGCGTGACGCGGGAGTCGAACCTGTGCCTGACGCCGTGCCCGACAAACAGTCAGAAGAAAATATGCATTACTTGACATTGACATGA
Protein Sequence: MSELKVCRICLRTEAKMYHFNLYQLKFYYEEVMALKVNENDGLPQHFCYECATILHKFHKFKEKCHSGQKVLRDLLWRGPITYASIYKVDRNDTILKSPITVITISERVKTYITKDSIEIDENFEHEKKVVEKIENIELEYFSDASMTDREDQDPINNVVDSEKIIEEVETAFGEEKIKVDEKNDLESFSPAAVYVEGEKGIMKVKCEEIKEKKKHSHEKGWFSGVKKVLESRHWKRFILSEEEAIKNFRSRAEDRKYVEATFKCTDCFKGFSKKDMLNRHILLRHVKTLGPYECRFCRMRFKLNCNLRKHMRQHYTKFECLRCHLICPLENTALLHDEYHSGVTRKCVYCDEEFRHSSTYYTHLRTHRSEHVCTLCGASFVSKIGLQQHKRVKHVIIDIESPDDDEEVNTYCERCDIRFETRKAYEEHLFHSALHSEGEGNFTNEKNRKVLGKKEQAKITKQLRKRSTDEEVFKTAHNLKRKKKPRRKHRKPTTCHQCGKHFDTQVACWKHHLAEHPRTSFYAPTERYICEICGSSLAPGSIANHQNMHTREKLHTCDTCGRQFHAIIGLKRHLVTHTGEKPYACSLCDKRFTQSNSMKLHYRTFHLKQPYPKRNRRKNKDDPKTAEAEESNSEEDSDDSLPDIEPEMERDAGVEPVPDAVPDKQSEENMHYLTLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01342552;
90% Identity: -
80% Identity: -