Basic Information

Insect: Diloba caeruleocephala
Gene Symbol: -
Assembly: GCA_947459985.1
Location: OX381632.1:9469103-9478636[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.016 1.3 10.1 2.2 1 23 383 405 383 405 0.97

2 9 6.2e-06 0.00051 20.9 1.0 1 23 452 475 452 475 0.97

3 9 0.00017 0.014 16.4 0.5 2 23 481 502 481 502 0.97

4 9 1.9e-05 0.0015 19.3 3.3 1 23 510 532 510 532 0.97

5 9 6.1e-06 0.0005 20.9 0.3 3 23 539 559 538 559 0.99

6 9 8.6e-05 0.007 17.3 1.4 1 23 568 590 568 590 0.99

7 9 8.5e-07 7e-05 23.6 0.5 1 23 596 619 596 619 0.97

8 9 0.25 20 6.4 0.8 1 14 625 638 625 648 0.79

9 9 4.2 3.5e+02 2.5 4.3 1 23 656 679 656 679 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.016	1.3	10.1	2.2	1	23	383	405	383	405	0.97
2	9	6.2e-06	0.00051	20.9	1.0	1	23	452	475	452	475	0.97
3	9	0.00017	0.014	16.4	0.5	2	23	481	502	481	502	0.97
4	9	1.9e-05	0.0015	19.3	3.3	1	23	510	532	510	532	0.97
5	9	6.1e-06	0.0005	20.9	0.3	3	23	539	559	538	559	0.99
6	9	8.6e-05	0.007	17.3	1.4	1	23	568	590	568	590	0.99
7	9	8.5e-07	7e-05	23.6	0.5	1	23	596	619	596	619	0.97
8	9	0.25	20	6.4	0.8	1	14	625	638	625	648	0.79
9	9	4.2	3.5e+02	2.5	4.3	1	23	656	679	656	679	0.94

Sequence Information

Coding Sequence: ATGTTGCATAACACAGGGCCTTATGGGCCCAACGAGGCGCCAGTAAACATGGGAGCGCCCGTTAACATGACTCCAATGACAGGACATATGAATCTAGCTCATAATATAAATAATTTGAGCAAAATGGCTCATCAAAGCGTACCAACGCCTAGCGGGCACTACAACCTGCCGGATTACGCCCCTTACAATCATTCCCCTTTAGGTATGCCACCGCAAATGCCTCAATTTCCCAACTATCAACACTTGGGCTTTCAACATAGCTATATGAACCAAAATGCGAATTCTATCAACGATCTATCATGGCAGAATGGTATGTTTCCTATGAATTTAAATATGCAGAATGAGCATAGCACTAATATGATTAACTATGCCTACGATAAGAGATTAATAGAGTCAGTGAGACAAGAAAATTTCAAGGAGCAAACTGTGCGAAAAACTCCATTAAATATACCTCAAATACCAAATAAGTCGTACAGTAAACACATGGACGCAAAGAACGACTATGAACATAATGATATGTACGAAAACACGCATCATAATCTAGATTTAAGCATGAAGACACAGGAAAAAATCTTAATAGATGATACCAGAAGAAAAAACATTGAGCATACAGTTAAACTTATTGAAAATATCTTAATACATTCATCAAATAAACCTAAAGAAGCACCTCCAAGTACCTCAGAATTACTGAATAGTCTTGAATCTGACCTACCTTCAGATATGACAATGGTAAATGCAAGAAAAACATCCACAATGGTACCAGATACAACAAGCATAGATCCTTTATCACTATCTCCTGATGACTTAACCAAGGACAATGATAGTGATATTGATAAACCAAAAGATGAAGATACCAGAAACAAAATGGAAACTGAAGATGAATCCACATCAGATGAGGAAGATGTAAAACCAATCGGATTAACAGAGCTAATTACACCAGAAAATGCTTCAGTGACTACAAACAATAGTATTGTTATAAAAATTGAAAAAGCAAGTTGGGCAGACACGGAGTGCTTTACTCCGTTTTTACGGGATTCAAATGGATTCCAGAGAGAGGAGCAAATGGGATCCAAAATTACTGTTTCTGAAAATAGTGTTGAAGAAGCTACTGTGGCTAGTAAAAGTGATGTAAAACTTGAAGGTGTATTTGAATGTCCCCACTGCACCCTACTATTCAAAAGTCCTAAAAGATTTCTTATACATTATAAATGGCACACCTTTGGCAAAACAAACGAGAAAAGAATGGAGGTTGCAAAAGTAAAAGAACAGAAGAAATTTGAGAAGAAAGAAGCAAAGATTTTAGAGAGGATTAATTCTAAAGATGTCACAGATGTTAAGGTGGATGGCAAGGTGTTCCCTTGCAAGGATTGTGATAAAGTGTTCAGTGCTAAAACAGGTCTAAAGAATCATAGACAGAGGACACACCCCACCCGGATTCGCGAATGCAAGATATGTCACAAAACTATATCAGGATGGACGGACCTCCGCGCGCACTTGGCGACTCACTCGGCGGACTCGGGGCCCGGCTACCAGTGCAGTGAATGTCCGAAACGGTTCAAGTATTCACACTCACTCGCAAAACACTCTGATACTCATTTGGAGAAAACACACGGCTGTTCCGATTGCCCCAAGATGTTCGGCTCACAAGCTCTACTGAAGATGCACATGAAAACACACGAGCGAATGTTGCGTGGAGCCACATACCGGTGTACTTACTGCGCGAAAGGATTCTTTGAATCCTATAGTTTGCAGGTACATGAAAGAACGCATCGAAATGAAAGACCGTATGTATGCGACATATGTAACACGAGTTTCGGAACCAACTCTAGTCTCAAGAGACATGTGAAAGTGTCCCATAACACAGCCAAGCCTCACCAATGCTCGGTGTGCCGACGCAACTTCTCGACCGAGTCCATACGCGACCGACACGAGTTGAGAGTCCACGGCAAACCAGAAGACTTCAAGTTTCCATGCAAACAGTGTTCCTGCAAGTATTTAAAACTAAAAGACTTACAGAAGCACGTCTATAAAATGCATCCCAAAGGTAAGAGGAAGAAAAAAGTGAAGAGCGATTCAGAATAA
Protein Sequence: MLHNTGPYGPNEAPVNMGAPVNMTPMTGHMNLAHNINNLSKMAHQSVPTPSGHYNLPDYAPYNHSPLGMPPQMPQFPNYQHLGFQHSYMNQNANSINDLSWQNGMFPMNLNMQNEHSTNMINYAYDKRLIESVRQENFKEQTVRKTPLNIPQIPNKSYSKHMDAKNDYEHNDMYENTHHNLDLSMKTQEKILIDDTRRKNIEHTVKLIENILIHSSNKPKEAPPSTSELLNSLESDLPSDMTMVNARKTSTMVPDTTSIDPLSLSPDDLTKDNDSDIDKPKDEDTRNKMETEDESTSDEEDVKPIGLTELITPENASVTTNNSIVIKIEKASWADTECFTPFLRDSNGFQREEQMGSKITVSENSVEEATVASKSDVKLEGVFECPHCTLLFKSPKRFLIHYKWHTFGKTNEKRMEVAKVKEQKKFEKKEAKILERINSKDVTDVKVDGKVFPCKDCDKVFSAKTGLKNHRQRTHPTRIRECKICHKTISGWTDLRAHLATHSADSGPGYQCSECPKRFKYSHSLAKHSDTHLEKTHGCSDCPKMFGSQALLKMHMKTHERMLRGATYRCTYCAKGFFESYSLQVHERTHRNERPYVCDICNTSFGTNSSLKRHVKVSHNTAKPHQCSVCRRNFSTESIRDRHELRVHGKPEDFKFPCKQCSCKYLKLKDLQKHVYKMHPKGKRKKKVKSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00050243;
90% Identity: -
80% Identity: -