Basic Information

Insect: Diloba caeruleocephala
Gene Symbol: -
Assembly: GCA_947459985.1
Location: OX381615.1:4872707-4889974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0028 0.23 12.5 0.5 1 23 276 298 276 298 0.99

2 11 0.01 0.84 10.7 6.7 1 23 305 328 305 328 0.97

3 11 2.9e-05 0.0024 18.8 0.2 1 23 359 382 359 382 0.98

4 11 0.0078 0.64 11.1 0.5 2 23 391 413 390 413 0.94

5 11 0.005 0.41 11.7 0.0 2 20 424 442 424 444 0.94

6 11 0.004 0.33 12.0 2.6 3 23 454 474 454 474 0.99

7 11 1 84 4.4 0.1 3 23 491 512 490 512 0.93

8 11 4.5e-05 0.0037 18.2 4.0 1 23 529 551 529 551 0.98

9 11 3.1e-05 0.0026 18.6 0.6 1 23 557 579 557 579 0.98

10 11 1.9e-07 1.6e-05 25.6 2.1 1 23 585 607 585 607 0.98

11 11 0.0015 0.13 13.3 4.2 1 23 613 636 613 636 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0028	0.23	12.5	0.5	1	23	276	298	276	298	0.99
2	11	0.01	0.84	10.7	6.7	1	23	305	328	305	328	0.97
3	11	2.9e-05	0.0024	18.8	0.2	1	23	359	382	359	382	0.98
4	11	0.0078	0.64	11.1	0.5	2	23	391	413	390	413	0.94
5	11	0.005	0.41	11.7	0.0	2	20	424	442	424	444	0.94
6	11	0.004	0.33	12.0	2.6	3	23	454	474	454	474	0.99
7	11	1	84	4.4	0.1	3	23	491	512	490	512	0.93
8	11	4.5e-05	0.0037	18.2	4.0	1	23	529	551	529	551	0.98
9	11	3.1e-05	0.0026	18.6	0.6	1	23	557	579	557	579	0.98
10	11	1.9e-07	1.6e-05	25.6	2.1	1	23	585	607	585	607	0.98
11	11	0.0015	0.13	13.3	4.2	1	23	613	636	613	636	0.96

Sequence Information

Coding Sequence: ATGGATGAGTTAAAATATTGCCGAGTATGTCTTGTGACTGATGTAAAGATGTTTGACTTGGACACTGTGTCGAGTGATGCAATTGGCGTAGTTTACTCACATATAATACAGATTCCGATCTTTGATAGAAATCAACATGTGTGTTATGAATGTGCTAGGTTGCTTTACAAATATCAGCAATTCAAGTCAAAATGTCTTAGAGCTCATAACATTCTATCTAGAATCAAAGTTGATTCAACACAGATAAAAATACAAGTCATCCAGAATATTGATCGAAAACTGAACAAATTACAATCTAACTTGGCATTATCTCCCATAGCTCTATATTATGACGAGCCATTAAATAATTCAAATACAACAAACACTGAAGTTGATGAATTAAAATTAGAAGAATACAAAGAAATAAAAAACCAAGAATTTAATATAAAAATGGAGGACATCAATAACATAGATTCAGATGCAAAATATGATTACAATCAATCTCTTATTGAATTCAATGAAGATGAACTAATTGATTCCTCAGAAGAGTATCACCCAGTCAAAACTTCAAAGCCTAAACGTAAAAGTAAAATAATCAAAGAACCAAAAACGAAGAAGAGAAAAATTAAAACATTGATAAAAAGTGAAGATAATTTCAGTGATGATGAACCTCTGTCAAAAAGTGTTAAAAAGACTGTAGAAAAAGTGTCAAAGCCACTTAAAAATAAACATGGCTTAAACATTGGTTACTTTGACGATTATGCAACAGTACTGTTTCTTACACCTGAAGATGCGAGAAAGGAGGTGCTGTTGCGAAAAGACTCAAGTAATTACAAAAAGTCACCTTTTAAGTGTGATTTATGTTATAGAGGTTATGAAGCAAAAGCAGCATTCATAAATCATATGAAAAAACATAGTCTTGAATATGGTGACTACGAGTGTGAACTCTGTCACCTAAGGTTCCCCCAGCAAATATATTTATGTAAACACAGACTATCATGCCACAAAAGAAAATTTAGTTGTAAATTGTGTCCATATATATGCTACTGCACTTATCAAGCCAAAACTCATGTTAGTCTCCACAAAGGGAAGAAATATCCTTGCAAAGATTGTGGAGAAATATTCAGCATGCCTAACAGCCTACTAATGCACAAACGTATGAAGCATTTAAAGGAGTCGGTACGTGAGAGTGTGTGTGAACATTGTGGCAGTACATTTGGAACACCGCGGGGTCTGTTCTTACATAACATGAAAGTGCACAGACAGGATAAGAACGACAAGCTGGGTCCCGAGTGTGAAGACTGCGGCGTACACTTTTCGTCAGAGGTGGCCTGGAAGCGACACCTAGTGATTTCTTCAAAGCACAAAGTTAGCAACGGTTGCAAGTACTGTGGCGACACGTTCTCGAACATGGACGATCTGAAATGTCACATGCGTGTGCACTCACGGAAGCATATCAATAAGTGCGATACCATTAAACTACCCGCAGCTTGTGCTATTTGTGATAAATGGCTATCCAACCGCGTGGAGTACAAGATACACGTTACATCGGAACACCCGCACACGGACGAAGCTAAGAAATTCAACGCGGATGATCAGACGCCTTTCGTGTGCGAAGTTTGCGGACAGATGTTTAAGCAACAATGTTTTCTAACTTACCATCAACGAAAACACACGGGAGAGCGACCATATAAATGCCACGAGTGCGGTAAAACGTTCCAACTGGCGGGAGCGCTGTCCATACACCGCAGTATTCACAACCGGAAGCGAGCGCACAAGTGCGACATGTGTGGCCGGGTTTTTACCTTCAAGAGCGCACTCAACAAACATATCAAGGTACACCTCGGCATCCGTCCGCACAAGTGCGCGATCTGCGACAAAGGCTTCATCCACATGTGCGACTTAAAGTTGCACATCAAGTACGTCCACGACAAAGTACCATGGCCCAAGAAGAAGAGCAAGCGAAATATCACTGAGGAAGCACCGTTTTTGGATTATAATTAA
Protein Sequence: MDELKYCRVCLVTDVKMFDLDTVSSDAIGVVYSHIIQIPIFDRNQHVCYECARLLYKYQQFKSKCLRAHNILSRIKVDSTQIKIQVIQNIDRKLNKLQSNLALSPIALYYDEPLNNSNTTNTEVDELKLEEYKEIKNQEFNIKMEDINNIDSDAKYDYNQSLIEFNEDELIDSSEEYHPVKTSKPKRKSKIIKEPKTKKRKIKTLIKSEDNFSDDEPLSKSVKKTVEKVSKPLKNKHGLNIGYFDDYATVLFLTPEDARKEVLLRKDSSNYKKSPFKCDLCYRGYEAKAAFINHMKKHSLEYGDYECELCHLRFPQQIYLCKHRLSCHKRKFSCKLCPYICYCTYQAKTHVSLHKGKKYPCKDCGEIFSMPNSLLMHKRMKHLKESVRESVCEHCGSTFGTPRGLFLHNMKVHRQDKNDKLGPECEDCGVHFSSEVAWKRHLVISSKHKVSNGCKYCGDTFSNMDDLKCHMRVHSRKHINKCDTIKLPAACAICDKWLSNRVEYKIHVTSEHPHTDEAKKFNADDQTPFVCEVCGQMFKQQCFLTYHQRKHTGERPYKCHECGKTFQLAGALSIHRSIHNRKRAHKCDMCGRVFTFKSALNKHIKVHLGIRPHKCAICDKGFIHMCDLKLHIKYVHDKVPWPKKKSKRNITEEAPFLDYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00000591;
90% Identity: -
80% Identity: -