Basic Information

Insect: Diloba caeruleocephala
Gene Symbol: -
Assembly: GCA_947459985.1
Location: OX381634.1:7178879-7192457[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.001 0.085 13.9 0.6 1 23 244 266 244 266 0.96

2 9 0.00069 0.057 14.4 2.3 2 23 333 354 332 354 0.95

3 9 0.048 3.9 8.6 1.7 2 23 359 380 358 380 0.96

4 9 0.00092 0.075 14.0 2.2 1 23 387 410 387 410 0.90

5 9 0.042 3.5 8.8 0.7 1 23 416 439 416 439 0.95

6 9 0.00019 0.015 16.2 2.5 1 23 445 468 445 468 0.97

7 9 2.9e-05 0.0024 18.8 1.7 1 23 474 496 474 496 0.98

8 9 1.8e-06 0.00015 22.5 0.7 1 23 502 524 502 524 0.98

9 9 1.2e-06 9.7e-05 23.1 1.4 1 23 530 553 530 553 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.001	0.085	13.9	0.6	1	23	244	266	244	266	0.96
2	9	0.00069	0.057	14.4	2.3	2	23	333	354	332	354	0.95
3	9	0.048	3.9	8.6	1.7	2	23	359	380	358	380	0.96
4	9	0.00092	0.075	14.0	2.2	1	23	387	410	387	410	0.90
5	9	0.042	3.5	8.8	0.7	1	23	416	439	416	439	0.95
6	9	0.00019	0.015	16.2	2.5	1	23	445	468	445	468	0.97
7	9	2.9e-05	0.0024	18.8	1.7	1	23	474	496	474	496	0.98
8	9	1.8e-06	0.00015	22.5	0.7	1	23	502	524	502	524	0.98
9	9	1.2e-06	9.7e-05	23.1	1.4	1	23	530	553	530	553	0.98

Sequence Information

Coding Sequence: ATGAGTACTAACTCCCGGAAGGGTCCTATAGTGGACCCTGGTGTGTGTAGATGTTGTGGTGCGTTGAAGAAATGTCGTTTGCTAAATGTGGAATATGAGTGGCTTGGGCAACGGGAGGTGTATTCGGAAATGTTTGTCGATTGCTTCGGACTACTCCTATCACACTTAGAAGACGAGGAGTCGGTACGTCTGATATGTGCGACGTGTGTGGTCCGACTGAGAGATGCGCGCGCGTTTAGACAACAAGTGCTGCAGTGTGAAGAACGACTGCTCAATGCCAACATACAGATGCATGAAGATGGACAGACAGAAAATGATATTAAGAATGAGACAGATGTGAAGGAAGAACTGGAGGAATGCGGACAACCGGACAAATCGCAACAAGATCATGGTGCTGACCATGATGATGGCATCGACCATGAAGGTGATGACGCCGACAGCGTGCAAAGCGATCCACTACCAAAGCCTGTCAAGAAACCGCCGAAAACCAAGAAGAAAGTTAAAAAGACAAAGAATTCTAAGAGCAAAGGGACTGTAAACGGTAAATGTGCAACTGAGAAGATTAGCAAGAGGAGAACCAGGAACCAGGATGTACAGGAAATTGAACCCCAGCTTCTGCCCCTACAGCCGCCTAAGAAACACATCGATACcgaacaaaagtcctatgctaatactataactgtagttgaaaactccttcgtctgcccattcgatacgtctttcagcgattactattgcatttactgtcgcgaagtcttcacagatcctaataaactaagagaacataccctcacacacgaccccaccactttcaaagactgcatcgcgaacaaaaagttacttttagtcgatatttttagaatcgattgtcgtctctgcgcaaatagaatcgatgacatcgaaatattcaaaagtcacctcactagctcccacggtaaaacgctatacgaaatgtcaaatgactttttaaaattcaggcttactatcaacaatttgacgtgtacggagtgcaacagtagttttagtttttttcacgcgcttaaaaaacacatggccgaacattttggcacttgcatctgcgatgtctgcggcgcgcattatttcgaagaaagaatgcttatattacatcagaaaacgcatcaaaaagtcgaggagtccttcccttgtaaggactgcgggaaaatatttaagtctaaacacagtagatacttacatgaagccaaattacataaaaaggaacccgcttaccaatgttataaatgcgacgaagtactattctcgtattcgctaagataccggcatatgatcgaagtacacggggagcaaagaatgttcccttgcgagcactgtgacagagcctatgacagccgaaaatcccttagagaacataataggagataccacttaaaaatatttaagcatcagtgcgatttgtgtgataaaaggttttaccttccgtcccgcttaaaagagcatatggcaacacatacaggcgagcggaattttcggtgcgagttttgtggtaaaagctaccctaggttgagagggttaaaagtacatatgcaatctcacagcaatgaaaagaagtataggtgtgttatgtgcaatgcgtcttttacacagaatgttaatttaaagaatcatatgaaacggcaacaccagagtttggaaatggaggAGGGTTTTAATGAGTAA
Protein Sequence: MSTNSRKGPIVDPGVCRCCGALKKCRLLNVEYEWLGQREVYSEMFVDCFGLLLSHLEDEESVRLICATCVVRLRDARAFRQQVLQCEERLLNANIQMHEDGQTENDIKNETDVKEELEECGQPDKSQQDHGADHDDGIDHEGDDADSVQSDPLPKPVKKPPKTKKKVKKTKNSKSKGTVNGKCATEKISKRRTRNQDVQEIEPQLLPLQPPKKHIDTEQKSYANTITVVENSFVCPFDTSFSDYYCIYCREVFTDPNKLREHTLTHDPTTFKDCIANKKLLLVDIFRIDCRLCANRIDDIEIFKSHLTSSHGKTLYEMSNDFLKFRLTINNLTCTECNSSFSFFHALKKHMAEHFGTCICDVCGAHYFEERMLILHQKTHQKVEESFPCKDCGKIFKSKHSRYLHEAKLHKKEPAYQCYKCDEVLFSYSLRYRHMIEVHGEQRMFPCEHCDRAYDSRKSLREHNRRYHLKIFKHQCDLCDKRFYLPSRLKEHMATHTGERNFRCEFCGKSYPRLRGLKVHMQSHSNEKKYRCVMCNASFTQNVNLKNHMKRQHQSLEMEEGFNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00726763;
90% Identity: -
80% Identity: -