Dcae021728.1
Basic Information
- Insect
- Diloba caeruleocephala
- Gene Symbol
- ZNF296
- Assembly
- GCA_947459985.1
- Location
- OX381634.1:236570-261043[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.74 61 4.9 0.0 3 23 122 142 120 142 0.95 2 14 0.0018 0.15 13.1 2.8 1 23 284 306 284 306 0.99 3 14 2.8e-05 0.0023 18.8 0.4 1 23 312 335 312 335 0.97 4 14 0.0026 0.21 12.6 2.6 1 23 340 363 340 363 0.94 5 14 7.6e-05 0.0062 17.5 1.7 2 23 529 550 529 550 0.98 6 14 0.00019 0.015 16.2 3.2 1 23 556 578 556 578 0.98 7 14 0.34 28 6.0 4.9 1 23 652 674 652 674 0.97 8 14 0.021 1.8 9.7 4.3 1 23 709 731 709 731 0.95 9 14 0.00063 0.052 14.5 2.6 1 23 737 759 737 759 0.98 10 14 0.0019 0.16 13.0 5.5 1 23 768 790 768 790 0.99 11 14 0.0011 0.089 13.8 1.9 3 23 838 858 837 858 0.97 12 14 0.0066 0.54 11.3 3.8 1 23 875 897 875 897 0.96 13 14 1.6e-06 0.00013 22.7 0.7 1 23 903 925 903 925 0.98 14 14 1.7e-07 1.4e-05 25.8 3.1 1 23 931 954 931 954 0.98
Sequence Information
- Coding Sequence
- ATGAACCATACAGCAGGCACCATACATTGCAACATGGACATCGATCCTCTGAGCTCATATGAATACCCATCTTACCAAGGTTACCCATCCCTGAACCCGACACAACAATACCCTTACAATGTTAAACTTGAAGAAACATTATATTACCAACCAAATAATCCTAATTCCTTAAACAACATTCATAACTCAACTCAAGAGGATGTCAAAAATCAGTTAACAGTACTCCAGACTAAAGAAGAAGAGAAAACCAATGATGTAAAGGATGTCAAACCAGTTTTAACAAAGAGTAAAAAAGAGAAAAATGGGCAAAAGAGTACTTACTGTTCTGAGAAGATAGCGGATGCAACATATCCATTCTATGGATGTTCTGTGTGCAATATAAGTTATACTGCTTTACCTGAATTAGATCAACACGTAACAATACATAAAAATAGAATGACTAGCTACAGGCTACGATTAAGAAATCAATTTAAGAAGAAACAGATTAAAAAGGAAAAGAAAAAGTTAAAAAAGATGGTAAAAATCAAGAAAGAAGTTGATTTAGATGTTGAAATTAAACCGGAAGATGGGTATATTGGTAACGAGAAGGCATCCGATTTCGTAAACAATGTTAGTAATGGAGTAAACTCCAATTCTGAATCTACTGGTGATATAAATATTGGAAACAATGCAGCTGAACCACACAGTAGTACACAAATTAATTCAAATAACAATGATATTGATTCCAAAACTAACAATGTAAATGTTACAAATAATGATAATGTAAATAATGAATTAGATAATGGAAATAATGTAAACAGCAAAGAGAATAGCATGGATGAGAATGAATTAAATAATTTAGAGAAAATTTACAAATGTTTTGCATGTCAAAAACAGTTCACGTTGAGCTATTATTTAAAACTACATGTCAGATCTCATACAGATGAAAAGCCTTATACATGTAGTGTATGCGGGCAGTCGTTCATAACGGCGAGTAAACTCGGGCGGCACAACAAGCGAATACACCTGGCTGCGCGGTTCCAGTGTAGGATATGCTTTAAGATATTCTCGAGGTTTGAGCTGCTGACGACTCACTTCGACAAGAATCATCCCGAGGATAAATTAGAAGGAGAACCGTACGACTACAACGCAATCCTCCCCTACCTGAAAGAGCTCGAGGAGCAACTCCGGGACCAATCCGAGGCGAAGGACAACAAGCCCAAAACTGACGAACTGTTGTGGAGCGAGCAGGCTGGACCACACGAGCCCACCATGCCCACCGGTGAACAGAGTGGGGTGGCTTCAGATGTTAAGATTGAGGTTCAAGAAGAAGACCAGAAGGACTTCCTCCCCAAGCTGGACATAATAATCGAAGAAGTCAAAGTGGATGTAGAAGTTAAAATTAAACAAGAACTATCTGATGAAGATGATCCGCCGATGTGTGTTGATGTCGGCAATGACAACGTTAATGGCGACCCCGACGATGTCATGGATGAGGGGGTTAAGGATGAAGACAGCGCGTCGGACTCGGACTACTTCCCGTCGAACACGTGGGCGGCCAGCCCTCTGCGCTCGCCCCCGCGCGCCCGCGCCCGCGCCCCGCGCACGTGCGGCGTGTGCCACAAGCGCGTGAGCAGCGCGTCGTACATGCGCGTGCACATGCGCACGCACACGGGCGAGAAGCCCTTCAAGTGCTACACGTGCGGCCGCGGCTTCATCACCAGCAGCAAGATGCACCGCCACGTGCTCACGCACGAACAAGACAAAGATGATGACAAGGTGGACGAAGACACCATCAAAACTGAAGGAGGCGAAGATACCATCAAAACTGAAGCAGACGAAGAGAACGTGGATGAGGAAGGAACAGAGGTCACCAAGAAAACAGCAAAGAAGAAATCCAAAATGAAACCGAAATTGTCAGCAAAAAAGAAGAACGGTGAAGAGAAACCGAGGAGGAAGCATCAGAAGCGGCCGCACTCCTGTGAATATTGTAATCAGAAGTTCCTGCACCTCAACATGCTGGAAGTGCACAAGAAGAGCCACGCGGGCGAGGCCCTGGTGCTGCGCTGCACGTTCTGCCTCCAGGAGGCAGCCAACGGGGAGGAGCTGGCGCTGCACCAGGCCTCCCACCGCGGGCCCAGGCCCTACCTGTGCACGCTCTGCGGGAAGACCTACAAGAAGCGGGAGACCATGGTGTACCACCGGAAGCACCACAAGCCCGACAAGGAGTTCGTGTGCGACATCTGCTCCAAGCGCTTCAACGCGTCGTGCAAGCTGCAGAAGCACCTCGTGACGCACCGCGGCGACAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGTGCGCACATGTTCAACACCAAGTACCACGTGCACATGCACCTGCGCACGCACCAGAAGGAGGGCCTAATCCTAGAAGAGAACCGTAGCGAAATCCTCGCGATGGTGCTGCAGAACGCACGCAAGATCCCCAAGCAGCCCGACGCCCCCGCCAACCTCACCGACATCATCCCCTCGGACGAGAGGTCCCGGATCTGCAACATTTGCGGCGAGATATTCCACCACTTCTACTACCTGGAGGAGCATTTGAAGAGCCACGGCTCCAAGATAGCCATCGAAGACATCGAGAAAGCGGAAGAGAAGAAATACATCTGTCAGATCTGCAACAAAGGGTTCAAACTCCATTATTACTTGAAACTCCACAGCTTCACGCACTCGAAGGAGAAGCCGTTCATTTGCCAGCAGTGCGGGAAAGGGTTTATCACCAAAGGTAAGCTAAAAAGACATTTGGAAACACACACGGGCTTGAAGAAGTACCAATGCCATATATGTTATAAATTCTTCACGAGGCCCAGCTATTTGAGGATACACATCCGGACAATTCATGGCACGCAGGACTATAACTTCCGGTTCGATAAGGGCTACGGTTTAAGCTCTATAGCCATGTCGGCTATTTCTCAAATGTCGGATGTTAGTCAAAATAGTGTTTAA
- Protein Sequence
- MNHTAGTIHCNMDIDPLSSYEYPSYQGYPSLNPTQQYPYNVKLEETLYYQPNNPNSLNNIHNSTQEDVKNQLTVLQTKEEEKTNDVKDVKPVLTKSKKEKNGQKSTYCSEKIADATYPFYGCSVCNISYTALPELDQHVTIHKNRMTSYRLRLRNQFKKKQIKKEKKKLKKMVKIKKEVDLDVEIKPEDGYIGNEKASDFVNNVSNGVNSNSESTGDINIGNNAAEPHSSTQINSNNNDIDSKTNNVNVTNNDNVNNELDNGNNVNSKENSMDENELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAARFQCRICFKIFSRFELLTTHFDKNHPEDKLEGEPYDYNAILPYLKELEEQLRDQSEAKDNKPKTDELLWSEQAGPHEPTMPTGEQSGVASDVKIEVQEEDQKDFLPKLDIIIEEVKVDVEVKIKQELSDEDDPPMCVDVGNDNVNGDPDDVMDEGVKDEDSASDSDYFPSNTWAASPLRSPPRARARAPRTCGVCHKRVSSASYMRVHMRTHTGEKPFKCYTCGRGFITSSKMHRHVLTHEQDKDDDKVDEDTIKTEGGEDTIKTEADEENVDEEGTEVTKKTAKKKSKMKPKLSAKKKNGEEKPRRKHQKRPHSCEYCNQKFLHLNMLEVHKKSHAGEALVLRCTFCLQEAANGEELALHQASHRGPRPYLCTLCGKTYKKRETMVYHRKHHKPDKEFVCDICSKRFNASCKLQKHLVTHRGDKFVLRYECPVCAHMFNTKYHVHMHLRTHQKEGLILEENRSEILAMVLQNARKIPKQPDAPANLTDIIPSDERSRICNICGEIFHHFYYLEEHLKSHGSKIAIEDIEKAEEKKYICQICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNFRFDKGYGLSSIAMSAISQMSDVSQNSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -