Dcae022086.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diloba caeruleocephala
Gene Symbol
-
Assembly
GCA_947459985.1
Location
OX381634.1:7100814-7105365[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.12 9.7 7.4 0.5 1 23 107 130 107 130 0.97
2 16 0.14 11 7.2 0.1 2 23 155 177 154 177 0.94
3 16 0.073 6 8.1 0.0 1 23 201 223 201 223 0.96
4 16 0.00029 0.024 15.6 0.2 1 23 227 249 227 249 0.98
5 16 7.3e-05 0.006 17.5 0.6 1 23 254 277 254 277 0.96
6 16 0.0059 0.48 11.5 0.4 2 23 284 306 284 306 0.93
7 16 0.038 3.1 9.0 0.4 1 23 459 482 459 482 0.93
8 16 0.088 7.2 7.8 0.4 2 23 508 529 507 529 0.96
9 16 0.065 5.3 8.2 0.4 1 23 551 573 551 573 0.97
10 16 8.7e-06 0.00071 20.4 0.4 1 23 577 599 577 599 0.99
11 16 0.00024 0.02 15.9 0.2 1 23 604 627 604 627 0.95
12 16 4.4e-05 0.0036 18.2 0.5 2 23 634 656 634 656 0.97
13 16 7.7e-05 0.0063 17.4 1.2 1 23 663 686 663 686 0.98
14 16 0.00088 0.072 14.1 2.0 2 23 693 714 692 714 0.96
15 16 3.8e-07 3.1e-05 24.7 1.4 1 23 720 742 720 742 0.99
16 16 0.021 1.7 9.8 1.3 3 23 747 768 746 768 0.96

Sequence Information

Coding Sequence
ATGAAGCGAAGAATCATCCCGTTATTCCAAGTTGCTTACGACAGGAGCTTATGTAGACCTCTGGGCACATTAATGGACTTCAGTAGGTTCAGACACAAGAGTTTTAAATCCTTTTTACCCTCATCAGTAAAAGATTTCAGTCCGTCTCGTAGTCCTTCACCAGTTTATCTAACAAGCGTTCCATCACCTATCATTGAGAGCACACAGTCGATCGAAATTGTTCAGCCAAAAGTAAAGAAAAATCCAGATGTAAGGCAGAATGCACTAGCTGTGTTTGAATTCTCAACTGTGTACCCTTTTATTTATAGCAGCAATAAATTCAAATGCTTCGTTTGCTCACAGCCGTTTTTGGAAATTGACATGTTGAAGCAACATTTGCAAACGTCACATACATTCGCGCCCTTGAAAAGATTAGTCAATAACCGAAGAGAAAATATCTTGAAAGTGGATGTGAGTGATATAACATGCAAGATATGCTCAGAGAAACCGGTCAACTTGGTCGAATTGAAGCGCCACCTCAAAGAAGTCCACGAAAAGCCGTTAGATTTAAATATCCAAGACAACGTGATACCATTCAAACTTCAGCTCATCGACGGTACCTACCAATGCGTTATATGCGAACAGGTTTTCATAAAAGTGCGAATTTTAGTGATACACATGAGCGTTCATTTCAATAATTACAGTTGTGAAATTTGCGGCTCGGGCTTCATGACTTTACGCCTTCTAAAAAAGCACTTGGAGGTCCATGATACTGGAAACTTCCCTTGTGATCGCTGCGACAAAGTGTTTAGTACTTCTTACAAGCGAACCTTGCATATCCGAGGCGTTCACCTGAAACAGTGTCCACGAAGATGTCCAATGTGTCCTGAGAGGTTCAATTCGAATTATAAGCGAACTATTCATTTACAAGACGTCCATAATCAGGTGACGAGAGTGCATAAATGTATCATCCAGAAATCAAACTCCACGATCACTGTGACAGATGAAAATGGAGAGGAAATCAAATTGACGGTTCTTAAATCTCCTATATCTTTAGACACGCTAGAATATGAAACTACATACTTTGCTGATAATAATTTTAAGAACGTAGACAAAAAGGACCGTATTAAAATGAAAAAGTTAAACAATACTGACATTAAGTTGGCAAATATGGATTTGTTGAAAGAACCACTGTCATTAGAAAATGTCGAATGGAAAGACGAAATCAATGAACTCCAAAAATCTGTTACATTTAATGTGAAAACTGTGCAAGGGTACCTGTGTGGACCACCGAGGAAGAGAAGTAAAACTGTGGAATATCAGACTTGGAAACGGAATGCTTTGATTATTTTTGAACACTCTTATGTCTACCCCTTTATACATTCCAGTAATAAATATAAATGTTTTATATGCTCCAAACCTTTTCTAGAAGCAAATCTATTGAAAAATCATACAATTAATGAACATAGCATCAAGGAAATGAAACTAGAGCTCAACAACAGGGTTAGAGATAAAAATCTGAAAGTTGACGTCACATACCTGCAGTGCAAAATTTGTTTACAGTTATTATCTAATTTGCAACAATTGAAAATACATTTGAAGGATCATGGCAAGAAAATAGAGCTTAGTTTGCAAGACAATATCATTCCATTCAAATTAGGAGGCGAGACTTTCGACTGTCAATTATGCGGAGAAAAGTATCTCAAACTAAGATTGCTCATCATTCATATGAGCAAACACTTCAACAACTACAGCTGTGAAATATGTGGTGCAGCGTTCATATCAATCCATTTGCTGAAAAGACATCTTCAGACGCACGAATCAGGAAGCTTTCCTTGCGATCAATGTGATAAAGTATTTAGCAACGCCGCAAAAAGAACTCTCCACACCAGAGGAGTGCATCTTAAACAATTTCCACGAAGATGTCCAATCTGTCCCGAAAGATTTAATTCAAATTATCAAAGAACAAAGCACTTGCGCATAGTACATAACCAGACAACTGGATTATTTAGATGTGATACTTGTGGTAGAGAATACGACTTGAAATACCATCTCCTCATACATATACGGTCTGTGCATTTACAAGAAAGGAATCAAGAGTGTCCTATATGTAATTCCAGGTTTTTTTCCAAGTACTGTCTCTCGAGGCACATGGTAATACATACTGGGGAAAAGAATTTCAAGTGTGAAATGTGTGGTAAAGCGTATGCAAGGAGGAAGAACCTTAGAGAACATTACAGGTCGCATGAAGTTGGCTTGTGTTCAGTTTGTGGTCAAAACTGTGGTGATCACAATAATCTTCTTGTTCATATTAATAACGTACATGGAGTGTTGTGA
Protein Sequence
MKRRIIPLFQVAYDRSLCRPLGTLMDFSRFRHKSFKSFLPSSVKDFSPSRSPSPVYLTSVPSPIIESTQSIEIVQPKVKKNPDVRQNALAVFEFSTVYPFIYSSNKFKCFVCSQPFLEIDMLKQHLQTSHTFAPLKRLVNNRRENILKVDVSDITCKICSEKPVNLVELKRHLKEVHEKPLDLNIQDNVIPFKLQLIDGTYQCVICEQVFIKVRILVIHMSVHFNNYSCEICGSGFMTLRLLKKHLEVHDTGNFPCDRCDKVFSTSYKRTLHIRGVHLKQCPRRCPMCPERFNSNYKRTIHLQDVHNQVTRVHKCIIQKSNSTITVTDENGEEIKLTVLKSPISLDTLEYETTYFADNNFKNVDKKDRIKMKKLNNTDIKLANMDLLKEPLSLENVEWKDEINELQKSVTFNVKTVQGYLCGPPRKRSKTVEYQTWKRNALIIFEHSYVYPFIHSSNKYKCFICSKPFLEANLLKNHTINEHSIKEMKLELNNRVRDKNLKVDVTYLQCKICLQLLSNLQQLKIHLKDHGKKIELSLQDNIIPFKLGGETFDCQLCGEKYLKLRLLIIHMSKHFNNYSCEICGAAFISIHLLKRHLQTHESGSFPCDQCDKVFSNAAKRTLHTRGVHLKQFPRRCPICPERFNSNYQRTKHLRIVHNQTTGLFRCDTCGREYDLKYHLLIHIRSVHLQERNQECPICNSRFFSKYCLSRHMVIHTGEKNFKCEMCGKAYARRKNLREHYRSHEVGLCSVCGQNCGDHNNLLVHINNVHGVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-