Dcae012116.1
Basic Information
- Insect
- Diloba caeruleocephala
- Gene Symbol
- -
- Assembly
- GCA_947459985.1
- Location
- OX381607.1:15096669-15097016[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-08 7.1e-05 23.0 0.1 1 41 8 48 8 53 0.89 2 2 1.8 1.7e+03 -0.7 0.0 31 44 49 62 47 63 0.75
Sequence Information
- Coding Sequence
- ATGCTAAAGAAAAATCTGTGGGATCCCGAAGCAATGGAAAAAGCAGTTGAAGCTGTACGAACGAAAGACTTGGGCTATAAAAAGGCATTGAAGTTACTTAGAGTCTCAAGAGCTACTTTGAAATATTATGTGAAAAAATCTGAAACGTCCATAGAAAATGTAGTTTCTGGGATAATGGAAAGAAAACCAGTTTTGCCGGTAGAATTAGAAGAGAAGCTGGTAAACTATTGCCCGTATATGGAGAAGAATTACTGTGGCATTAGCGCCGTCTACAAGGTCAAGACCAACAACACCGAATCTATTACCGCAATCAGGAAATTCTTCAACCCCATTTATAGTTCCTGCTGA
- Protein Sequence
- MLKKNLWDPEAMEKAVEAVRTKDLGYKKALKLLRVSRATLKYYVKKSETSIENVVSGIMERKPVLPVELEEKLVNYCPYMEKNYCGISAVYKVKTNNTESITAIRKFFNPIYSSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -