Basic Information

Gene Symbol
ct
Assembly
GCA_947459985.1
Location
OX381623.1:21632446-21654622[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.9e-27 3.8e-23 81.8 0.0 3 70 135 203 133 209 0.94
2 3 3.4e-32 4.4e-28 97.6 0.0 4 77 534 608 532 610 0.96
3 3 4.8e-31 6.3e-27 93.9 0.0 3 75 736 809 734 813 0.95

Sequence Information

Coding Sequence
ATGCTCCGTGCGCTCGACCTGGGCGGTGGAGAGCGATCTCTAGAGCGAAAGCCTGAGCTTCGCTCACCGAGCGCTGCGCCTTCACTCCGAGGCAACTCGGCCGAGCGGGAACGAAGCGCTGAGCGACGGGATACAGGTGTCGAGGAGTGGCCCAGCACGCCGCCGCCGCTCAACAACAACACCACCCACCACAACAACAACGGCCCGACGCCGCTGCCGCTGCCGCCGCCGAGCCCCTTCCGCTTCGAAGAACACCGCACTTACAGGTTCGCCGAGGACATGGGGCCCTTACCACCCGGCGCTCTCGTCGGCCGCTTGGGCGACTCCCTCATACCCAAAGGAGATCCTATGGAGGCGCGGCTGCAAGAGATGCTCAGATACAATATTGACAAATACGCCAACACCAACCTGGACACGCTGCATATAAGTCGAAGAGTCAGAGAACTGCTGTCAGTACACAATATTGGACAGAGATTGTTCGCCAAGTACGTCCTGGGCCTGTCTCAAGGGACTGTGTCCGAGTTGCTGTCAAAGCCGAAGCCCTGGGACAAGCTGACGGAGAAAGGCAGGGACTCCTACAGGAAGATGCACGCGTGGGCCTGCGACGAGGCCGCCATCATGCTGCTCAAGTCATTAATCCCTAAAAAAGTTGGGACGAAAGATGGGACCGGCGCGGTGTTTGGGCGACCCGAGGGTGAAGGCGAAGATAGGCTTACGCACGCAATTATGAACGAAGCACATCTGATGAAGACGCCCACCGGACAACCCCACAACGATGATTCCAGAAGCAATGAGGATTCTAGCTCACCGAGGACGCAGTGCCCCTCACCATTCTCCAACAAGGATTCAAGTCAAAACAGAAGACTTAAGAAGTATGAGAACGATGACATTCCTCAAGAAAAAGTGGCCCGTATATATCAAGAGGAGCTTGCCAAAATTATGACAAGAAGAGTAGAGGATATACGCCGTGAGGGTTTTCCTAGTATGTTTCCTCCTTTTTTCAGCGGTGGCATGCCACCACACATGGAGAGGCCACCGGAAGACATCCGCATGGCACTGGAGGCATACCACAGAGAACTGGCCAAGATCCAACCGGCTAGCAACATTCCTAACTTACACAACTTACCAGGAATGCCTCCCTTTCCCAACCTCCTCGCATTGCAGCAGCAAGCGATGCAACAAGCACAGAACCAGCAGATGAACGGCTCAGGCGCGGTCCAAGACCTTTCTCTGCCTAAAGATAAAAACGCCAAAATTAATGGAATGACTGATAGTGATAAGGATAGGGCAATAGATGCCGAAGAGGCTATTAGACATGCAGGGAGTGCATTCTCGTTAGTTAGGCCCAAACTTGAGCCGGGACAGCAATCGACGGGGTCCTCTGCATCCAGTCCGCTGGGCAACGCGATACTACCACCAGCAATTACTCCAAATGAGGACTTTAGTAATTCAGCGGCAGCAAGCCCGCTACAAAGGATGGCGTCAATCACGAATAGTCTGATCTCTCAGCCATCAAATCCTCCTCATCATCCACCAGTACAGAGGTCTATGAAAGCAGTTCTTCCACCAATCACACAACAACAATTCGATCTCTTCAATAATTTAAACACAGAAGATATAGTAAGGAGAGTAAAAGAGGCTCTTAGCCAGTACTCAATTAGCCAAAGACTGTTCGGTGAATCCGTTCTTGGTCTATCTCAAGGATCCGTAAGCGACTTGCTAGCGAGACCGAAGCCCTGGCACATGCTTACGCAAAAAGGACGAGAACCTTTCATCCGCATGAAGATGTTCCTTGAGGATGACAATGCTGTGCACAAGCTGGTGGCGTCACAGTACAAAATTGCGCCGGAGAAACTGATGAGGACCGGAAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCAATGCCGCCAACGCAGAAGATGATTTCTGACGCAACCTCCCTGCTCAGCAAAATGCAACAGGAGCAGCTCCTGGGTCCAGGCCATCTTGGTCACCTTGGTCAGCCCACGCCACTGTTACTGACGCCACCGGGCTTCCCGCCGCACCACGCGGTAACGCTGCCACCACAACACCATGACAGTATGAAGGAAAGGAAGCCACCACCCCCACCACAACCTCACCACCAGCCCCCAATCATGCGCAACTTACATCAACATATATCGCCCAGCGTCTATGAAATGGCAGCACTCACTCAAGACTTAGACACGCAGACCATTACGACAAAAATCAAAGAAGCGCTTCTGGCAAATAACATTGGCCAGAAAATCTTTGGCGAAGCAGTCCTGGGTTTGTCACAGGGATCTGTTAGTGAATTGCTCTCAAAACCAAAACCCTGGCACATGCTCAGCATTAAAGGTAGAGAACCTTTCATTCGAATGCAGCTGTGGTTAAGCGATGCTCACAATATTGATCGCCTTCAAGCTTTGAAGAATGAGAGACGAGAAGCAAGTAAGCGGCGGCGATCAAGCGGCCCCGGACAAGATAACTCGTCCGACACATCATCAAACGACACGTCAGAGTTTTACCACTCCAGCTCGCCTGGCCCAACCGCGGGAACGCCTTGTGCCAAGAAACAACGAGTATTGTTCTCTGAGGAGCAGAAAGAAGCGTTGAGATTAGCGTTCGCGCTCGATCCCTACCCTAACATGCCGACGATCGAATTCCTAGCTGCCGAATTGGGTCTGTCGTCACGAACTATCACCAACTGGTTTCATAATCACCGCATGCGACTAAAACAACAGGCCCCGCATGGCTTACCGGCTGAACCTCCCGCCCGGGAGCAGTCGTCTGCGCCTTTTGACCCTGTCCAGTTTCGTCTTCTCCTCAATCAGAGACTGCTGGAACTCCAAAAGGAAAGGATGGGTCTAGCTGGAGTACCGCTACCATACCCGCCATACTTCGCAGCTAACTCTAATTTGGCAGCGTTAATAGGTCGAGGACTGATACCGCCAGAGGAGCAGGTGAAGGATCAGTCCGGTGGCCTCGACCTGTCAATGCCACTAAAACGGGAGCCCGACGGGGATGACTTCGAGGACGACGATGTCGAAAGCAACCTCGGCTCCGAGGACTCATTGGACGAGGAATCTAAGACTGAGCCTAAGGCGGCGTCGACGCCGGCCGGTCGCTCCAGCAGACGAAAGCCCGCCGCACCACAGTGGGTCAACCCCGACTGGCAGGACGAGAAGCCTAGAAATCCCGATGAAGTGATAATTAACGGGGTTTGCGTAATGCGAAGCGACGACTTCCGTCGAGAGGCAGAGGAGACCGTGCTCGTGGAGCCTTCGCCGGTGCCGCGGGACGGCTCGCCGGCCGCCTCGCCCGCGCCTCGCACTCCGCACACGCCGCTCGCGCCGCACACGCCGCACGCACCGCTGGCGCCGCACACACCGCACACACCGCACACGCCGCACACGCCGCACACGCCGCGGCCGCCACACACGCCTGACGACGTTATCCCCGACGACAAAATCAAATCGGAGACCGACGACGGTTGGGAGTACTAA
Protein Sequence
MLRALDLGGGERSLERKPELRSPSAAPSLRGNSAERERSAERRDTGVEEWPSTPPPLNNNTTHHNNNGPTPLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGAVFGRPEGEGEDRLTHAIMNEAHLMKTPTGQPHNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPSMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPASNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKNAKINGMTDSDKDRAIDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGPGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDSMKERKPPPPPQPHHQPPIMRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGTPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPAREQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEEQVKDQSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPAGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVLVEPSPVPRDGSPAASPAPRTPHTPLAPHTPHAPLAPHTPHTPHTPHTPHTPRPPHTPDDVIPDDKIKSETDDGWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00887212;
90% Identity
iTF_00445005;
80% Identity
iTF_00450005;