Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00065 2.3 9.0 0.3 3 17 11 25 10 28 0.89

2 5 0.00065 2.3 9.0 0.3 3 17 30 44 29 47 0.89

3 5 0.00065 2.3 9.0 0.3 3 17 49 63 48 66 0.89

4 5 0.00065 2.3 9.0 0.3 3 17 68 82 67 85 0.89

5 5 9.8e-06 0.035 14.8 1.8 3 26 87 110 86 112 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00065	2.3	9.0	0.3	3	17	11	25	10	28	0.89
2	5	0.00065	2.3	9.0	0.3	3	17	30	44	29	47	0.89
3	5	0.00065	2.3	9.0	0.3	3	17	49	63	48	66	0.89
4	5	0.00065	2.3	9.0	0.3	3	17	68	82	67	85	0.89
5	5	9.8e-06	0.035	14.8	1.8	3	26	87	110	86	112	0.94

Coding Sequence: ATGCGGCGCCGTCCCCGAGACACAGCTGACACGTGTGCAACAGCAGAGACATCGCAGATGCGGCGCCGTCCCCGAGACACAGCTGACACGTGTGCAACAGCAGAGACATCGCAGATGCGGCGCCGTCCCCGAGACACAGCTGACACGTGTGCAACAGCAGAGACATCGCAGATGCGGCGCCGTCCCCGAGACACAGCTGACACGTGTGCAACAGCAGAGACATCGCAGATGCGGCGCCGTCCCCGAGACACAGCTGACACGTGTGCAACAGCAGAGACATCGCAGATGCGGCGCCGTCCCCGAGACACAGCTGACACGTGCCGTGCCTGTAGTGTCCCCGGCACACATACCCCCTCACAACCAAACACAGCGAGCTTGCTTGGTGCACACAATGTACGGTGgtag
Protein Sequence: MRRRPRDTADTCATAETSQMRRRPRDTADTCATAETSQMRRRPRDTADTCATAETSQMRRRPRDTADTCATAETSQMRRRPRDTADTCATAETSQMRRRPRDTADTCRACSVPGTHTPSQPNTASLLGAHNVRW

Sequence clustering based on sequence similarity using MMseqs2