Basic Information

Insect: Dicycla oo
Gene Symbol: -
Assembly: GCA_948252095.1
Location: OX411727.1:7486944-7488767[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0044 0.54 11.9 0.4 2 23 311 333 310 333 0.92

2 10 0.0022 0.27 12.8 2.1 1 23 339 361 339 361 0.99

3 10 3.5 4.2e+02 2.8 2.8 1 23 367 390 367 390 0.85

4 10 0.00021 0.025 16.1 0.4 1 21 395 415 395 416 0.95

5 10 0.00013 0.016 16.7 0.7 2 23 430 451 429 451 0.97

6 10 1e-06 0.00012 23.3 0.1 1 23 457 479 457 479 0.97

7 10 0.00057 0.07 14.7 2.1 1 23 486 508 486 508 0.96

8 10 4e-06 0.00049 21.5 2.1 1 23 514 536 514 536 0.99

9 10 7.7e-07 9.3e-05 23.7 0.8 1 23 542 564 542 564 0.98

10 10 9.5e-06 0.0012 20.3 1.5 1 23 570 593 570 593 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0044	0.54	11.9	0.4	2	23	311	333	310	333	0.92
2	10	0.0022	0.27	12.8	2.1	1	23	339	361	339	361	0.99
3	10	3.5	4.2e+02	2.8	2.8	1	23	367	390	367	390	0.85
4	10	0.00021	0.025	16.1	0.4	1	21	395	415	395	416	0.95
5	10	0.00013	0.016	16.7	0.7	2	23	430	451	429	451	0.97
6	10	1e-06	0.00012	23.3	0.1	1	23	457	479	457	479	0.97
7	10	0.00057	0.07	14.7	2.1	1	23	486	508	486	508	0.96
8	10	4e-06	0.00049	21.5	2.1	1	23	514	536	514	536	0.99
9	10	7.7e-07	9.3e-05	23.7	0.8	1	23	542	564	542	564	0.98
10	10	9.5e-06	0.0012	20.3	1.5	1	23	570	593	570	593	0.98

Sequence Information

Coding Sequence: ATGAATAACACAAAAGATGCAATGTACTGTCGCCTTTGCGCTGAGTTAAAACAACACAATACCCTCACTAACCTGCAGACTGACGAAGAAACATGCCAGAAAGTCGTCAATAAACTGTCAAGATTCAACATAATTATGGATTTTCAGGAAAATATACTGCCAAAGACTGTCTGCCTAATATGTATAAAATCCTTAGAACGAGCATTTGTTTTTGTAAATGCAGTTGAACAGGCGCAAGCATTTCTTAGTGACTTTATTCTTGTACAAATAAATACTACTGCAACTGCAAGGGATTCTTGTGATGAAAACATGTTGTATGAGCCTCCAAATAATAAAAACGATATTATTGACTTTAAAGATGAACACAGTCAAGATTCAATGGAAGTAAATGATGATGGTGTAAATTTAAGTGAAAAATGTGATAGTGAGGTCATGACTGAGGTGTTTAATGATTTTAACTATTCTGTGGATAATGGAAACACTGAAGAACATATAATTGAGAATAAGCATGAAATAAAACCTTCTAAAGAGATTATCGAAGAAAATACTGATTTAAAGGATGAATATGTTGAAACTCTTGATTTATACCATGTTGAAGATAATAAAAACATCTTAAAAGATATATTAGAAAAAGAACTTGATTCCGAAGCAATTCTATTAGATAATACAGTTTGTTCATTAGATTACATAATTAAACAAAATGACAGTAATGTGGACACCAAAAATTTGGATGAAAATGTACAACAATCACAACCTAAACACAGAAAACGCAATTCTAAACTAAGTTCACCCAAACGATTGGCTAGTACAGTATATTTTAAAACAAACACAAATAAAATACAGACAACTCAAAATAATAGTAACATGCCCACCAAAAATATGGACACAGATGAAGAAGATATAAAAATGTCATGGGAGGATTATGAATGGAAGTGTTCTTATTGTGAAACACTATTCCCGAGTTTAGAGGAACTACAGAAACATTCAATGCAGTACCACAACTCCTGTAACCCTTACCAATGCACTGATTGTGTAACTAGAAGCTCAAATCTCAAAAGTTTTATGAAGCATGCGAGAAAACACAAAAATTACTTACGTTATTCTTGCTACAAATGCTTTAGAAAATTTCCTAAATTGTATCAAACCGGGCTGCATAATAAGAAAGTTCACAAAGACTCTGACTATGTTTGCTCGGGATGCAACACTCCTTTTCACAGTAACAGTGAACTAAAGGAGCATGTTAACAAATATTACAGAAAATTGATAAAAAAAACACCATCTGATTTAAAGTGTAGTATATGCTATAAGAATACTGCAAGTGCTAAAGATTTACGAAAACATTTACTTACTCACGAAGATAAAAAGGATTATGTTTGTGAAACTTGTGGCAAATCTTTCGCAAATAAATATCAATTAGCAGAACACTTAGTTATACATAGTGCGGTAAAGATCTTGCATCCCTGTGATAAATGTAGTGCTTCCTTTATTCGTGTAAGCCATTTACGATGGCACAAAAGCATTCACACTGGCATCAAACCGTTTACCTGTGACCAATGCGGAAAAAGTTTCCGTATGAAAAAATATATTGCTAACCATATGAAAACTCACATGGACTCTCTTCCATATCCTTGTACACTGTGCAATAAGAAATTTCGTTCAGCCCCCAATTTGAAAAATCATATGCTGCAGCATACTGGAGAGAAACCGTTTTCTTGTACCATTTGTCCGAGAGACTTTACGAACCTGGCCAATCGTAACAAACATATGAGACGTAGACATGGTATTGAATTGGGAAAGAAGAAACAGCCTATTATAAAACAGTAA
Protein Sequence: MNNTKDAMYCRLCAELKQHNTLTNLQTDEETCQKVVNKLSRFNIIMDFQENILPKTVCLICIKSLERAFVFVNAVEQAQAFLSDFILVQINTTATARDSCDENMLYEPPNNKNDIIDFKDEHSQDSMEVNDDGVNLSEKCDSEVMTEVFNDFNYSVDNGNTEEHIIENKHEIKPSKEIIEENTDLKDEYVETLDLYHVEDNKNILKDILEKELDSEAILLDNTVCSLDYIIKQNDSNVDTKNLDENVQQSQPKHRKRNSKLSSPKRLASTVYFKTNTNKIQTTQNNSNMPTKNMDTDEEDIKMSWEDYEWKCSYCETLFPSLEELQKHSMQYHNSCNPYQCTDCVTRSSNLKSFMKHARKHKNYLRYSCYKCFRKFPKLYQTGLHNKKVHKDSDYVCSGCNTPFHSNSELKEHVNKYYRKLIKKTPSDLKCSICYKNTASAKDLRKHLLTHEDKKDYVCETCGKSFANKYQLAEHLVIHSAVKILHPCDKCSASFIRVSHLRWHKSIHTGIKPFTCDQCGKSFRMKKYIANHMKTHMDSLPYPCTLCNKKFRSAPNLKNHMLQHTGEKPFSCTICPRDFTNLANRNKHMRRRHGIELGKKKQPIIKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00449503;
90% Identity: iTF_00449503;
80% Identity: -