Basic Information

Insect: Dicycla oo
Gene Symbol: -
Assembly: GCA_948252095.1
Location: OX411717.1:22899781-22928180[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.7e-05 0.0094 17.4 2.2 1 23 432 454 432 454 0.97

2 20 0.004 0.49 12.0 0.6 1 20 460 479 460 482 0.94

3 20 2e-05 0.0025 19.3 5.6 1 23 501 523 501 523 0.98

4 20 9.4e-05 0.011 17.2 4.1 1 23 529 551 529 551 0.99

5 20 3.6e-05 0.0044 18.5 5.3 1 23 557 579 557 579 0.97

6 20 8.2e-06 0.001 20.5 7.4 1 23 585 607 585 607 0.97

7 20 6.9e-07 8.4e-05 23.9 2.9 1 23 613 635 613 635 0.97

8 20 9.8e-05 0.012 17.1 6.7 1 23 641 663 641 663 0.97

9 20 9.7e-05 0.012 17.1 6.5 1 23 669 691 669 691 0.97

10 20 4.7e-07 5.7e-05 24.4 1.9 1 23 697 719 697 719 0.98

11 20 9.3e-06 0.0011 20.3 7.7 1 23 725 747 725 747 0.98

12 20 2.4e-05 0.003 19.0 6.6 1 23 753 775 753 775 0.98

13 20 1.9e-06 0.00023 22.5 4.2 1 23 781 803 781 803 0.98

14 20 1.7e-05 0.0021 19.5 6.2 1 23 809 831 809 831 0.97

15 20 2.1e-06 0.00025 22.4 5.0 1 23 837 859 837 859 0.98

16 20 2.9e-06 0.00036 21.9 6.0 1 23 865 887 865 887 0.98

17 20 5.7e-05 0.007 17.8 7.9 1 23 893 915 893 915 0.97

18 20 2.4e-05 0.0029 19.0 7.7 1 23 921 943 921 943 0.98

19 20 0.0007 0.086 14.4 0.3 1 23 950 972 950 972 0.96

20 20 0.3 37 6.1 4.9 1 23 984 1006 984 1006 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.7e-05	0.0094	17.4	2.2	1	23	432	454	432	454	0.97
2	20	0.004	0.49	12.0	0.6	1	20	460	479	460	482	0.94
3	20	2e-05	0.0025	19.3	5.6	1	23	501	523	501	523	0.98
4	20	9.4e-05	0.011	17.2	4.1	1	23	529	551	529	551	0.99
5	20	3.6e-05	0.0044	18.5	5.3	1	23	557	579	557	579	0.97
6	20	8.2e-06	0.001	20.5	7.4	1	23	585	607	585	607	0.97
7	20	6.9e-07	8.4e-05	23.9	2.9	1	23	613	635	613	635	0.97
8	20	9.8e-05	0.012	17.1	6.7	1	23	641	663	641	663	0.97
9	20	9.7e-05	0.012	17.1	6.5	1	23	669	691	669	691	0.97
10	20	4.7e-07	5.7e-05	24.4	1.9	1	23	697	719	697	719	0.98
11	20	9.3e-06	0.0011	20.3	7.7	1	23	725	747	725	747	0.98
12	20	2.4e-05	0.003	19.0	6.6	1	23	753	775	753	775	0.98
13	20	1.9e-06	0.00023	22.5	4.2	1	23	781	803	781	803	0.98
14	20	1.7e-05	0.0021	19.5	6.2	1	23	809	831	809	831	0.97
15	20	2.1e-06	0.00025	22.4	5.0	1	23	837	859	837	859	0.98
16	20	2.9e-06	0.00036	21.9	6.0	1	23	865	887	865	887	0.98
17	20	5.7e-05	0.007	17.8	7.9	1	23	893	915	893	915	0.97
18	20	2.4e-05	0.0029	19.0	7.7	1	23	921	943	921	943	0.98
19	20	0.0007	0.086	14.4	0.3	1	23	950	972	950	972	0.96
20	20	0.3	37	6.1	4.9	1	23	984	1006	984	1006	0.99

Sequence Information

Coding Sequence: ATGAATCAGGATCACCATAATATGAATGCGGGTGGTGGCCAGCCTCCGGGAAGTTCTGAGTCACAGGGCCAAAGAGTTCAGGCCACCCAGCAGCAACAACAACAGAATAACTTGCCTGCCACGACTTCTGCTACTGATTTGCGAGTGAACTCGGCCGCAGTGAACGTTGCTTTGTCTAGTGTCGCGAAATATTGGGTATTTACAAATTTATTTCCCGGACCGATACCGCAAGTGTCTGTGTACGGATTGCCTGCCGGTGCCAGGATTGAGAATGGGAAGCCAATCCAGGATCTTGGTCAAGCTCATGCGAGTATACTGAATGGAGATCCAAATATCATACTTGGGCATCATGCGGGCCAGTCCCAAGTTACTGTATCTGCTCCTGGTGGTCAGCAGATACCAGTCTCACAGATCATCGCTACACAGCCTGGACAAACTCATGAAGCACTTGTGGCTCATAGTCAGCAACAAGCTGAGCTGGCAGCGGCCCAGGGCTCCGGCAACAACGCCCAGGTGTCAGTTAGTGCCGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCATGTGGGTCACCATTCTCAACAACACATAATGCAGCAGCAACTTATGGCGCAGGCGCGGCCAGATCACAATAACCAACAGATCCAACTGACGGTAAGCGAGGACGGCATAGTGACGGTGGTGGAGCCGGCGGGCACAAAGATGGTCGATAAGGAGGAACTCCATGAGGCCATCAAGATGCCAAACGACCACACGCTCACCGTGCATCAGCTGCAGCAGATAGTGGGACAACAGGTATTAGACAGCGTAGTACGCATAGAGCAAGCGACCGGTGAGCCGGCGAACATCTTAGTGACGCACAACCCTGATGGCACGACCTCCATCGAAGCAAGTGCTGCCGACCCGCTGATTGTCAAGGACGAAAAGAGTGCTAACAAAATTGAGACCGCACAGTTTGCTATACCTGCTGAGATAAAGGATATAAAGGGAATTGATTTGAAGAGTGTAGGAGCCATGGGCATGGAAGGTGCAGTAGTGAAGATTTCAGCCGGTGCGTCGGAACACGACCTCCACGCGATGTATAAAGTCAATGTAGAAGATCTTTCGCAACTGCTTGCTTACCATGAAGTGTTCGGAAAACTTAATTCCGAAGGCCAGCAACAACAAGCTAAAGTAATAAGCGAGGTGGAAGTAGAAGTGGAGGCTGGCACCAGCGCAGCCATGTCTGAAACAGAATCCTCGCCAGGCCACCACTCATGCGATATCTGCGGGAAAATATTCCAGTTCCGATACCAACTTATTGTTCATAGGCGTTATCACGGCGAAAGTAAGCCATTCACGTGTCAAGTTTGCGGTTCCGCATTTGCAAATCCTGTTGAATTGTCGAGGCATGGAAAATGTCATCTTGCTGGAGATCCGAACGAAAGACACGCAAAGAGGATGGCACAAGATAAGCCATACGCTTGCACTACTTGCCACAAAACTTTCTCACGTAAAGAACATTTGGACAATCATGTTCGAAGTCATACTGGAGAAACTCCGTACAGATGCGAATTCTGCGCGAAGACTTTCACCCGTAAAGAGCACATGGTCAACCACGTACGAAAACATACGGGCGAAACTCCGCACCGATGTGATATTTGCAAGAAGAGTTTCACCAGGAAAGAGCATTTCATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGCGAATTGTGCGGCAAGTCGTTCACGAGAAAAGAACACTTCACCAATCACATACTGTGGCATACGGGCGAAACCCCGCACCGCTGTGACTTCTGTTCCAAAACGTTCACTCGTAAGGAGCATCTCCTGAACCACGTCCGTCAACACACGGGCGAGTCGCCTCACCGCTGCAACTTCTGCAGCAAATCTTTCACACGCCGGGAACACCTTGTCAACCACGTGCGACAACACACCGGAGAAACACCCTTCCAGTGCGGATACTGTCCTAAAGCGTTCACAAGGAAGGACCACCTTGTGAACCACGTCCGTCAGCATACAGGTGAATCCCCACACAAGTGCTCGTACTGCACAAAGTCCTTCACTCGCAAGGAACACCTGACGAATCATGTGCGACAACATACGGGCGAGTCTCCTCACCGATGTACTTACTGCGCCAAGTCCTTCACGAGGAAGGAACACCTCACCAACCACGTTAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAGCATCTCAACAACCACATCCGACAGCACACCGGCGTCACGCCGCACACTTGCTCCTACTGCAGCAAGAGTTTCACTAGGAAGGAACATCTTGTTAACCATGTTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCACCTCACGAACCACGTGAACCTTCACACAGGAGAAACGCCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGAAAGGAACATTTGACCAACCATGTCAGAATTCATACGGGCGAGTCTCCGCACCGCTGCGACTTCTGCCAGAAGACGTTTACTCGTAAGGAGCACTTGACGAACCATCTGAAGCAGCATACCGGCGATACCGCACACGTCTGCAAAGTGTGCTCCAAGCACTTCACCAGGAAAGAACATCTTGTCACACATATGAGGTCGCACAGTTGTGGCGAACGTCCATTCAGTTGCGGCGAGTGTGGAAAATCTTTCCCATTGAAAGGCAACCTACTATTCCATGAACGATCACATGCCAAGAATAATGCTAATGCTGCCAATAAGCCGTACAGATGTGAAGTCTGCTCCAAGGAATTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGCACACACGCGGAGTGGGTGGAGGAAGGTGCCGCGACCGGCGAAGCGCCCGCAGAAACGGAAGACTGTACTGATAATAAGTGTATCAAAGTTGAGCCAGAACGAATTGAAAGAAAACATGAAGTCAGGACGACAGTGGAAACGAGACCAGCTGAGACCAATGTCGCACAAAGTCAGCCAAACACAGCTACTGTGATGATAACCAATAATCAACAAGTGCGCGCGGCGACCGTGAGCGCGGTGGGTGCGGTGAACGCGGCCGGCGCGGGCGTGGCGGGCACGTTCGCGCACGCCGTGGCCGCGCAGCACCACGCCGGCGCCAACATCGCGCACCACCCCGTCACCGTTAACTACTAG
Protein Sequence: MNQDHHNMNAGGGQPPGSSESQGQRVQATQQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPIQDLGQAHASILNGDPNIILGHHAGQSQVTVSAPGGQQIPVSQIIATQPGQTHEALVAHSQQQAELAAAQGSGNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHIMQQQLMAQARPDHNNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQAKVISEVEVEVEAGTSAAMSETESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVTPHTCSYCSKSFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHAKNNANAANKPYRCEVCSKEFLCKGHLVSHRRTHAEWVEEGAATGEAPAETEDCTDNKCIKVEPERIERKHEVRTTVETRPAETNVAQSQPNTATVMITNNQQVRAATVSAVGAVNAAGAGVAGTFAHAVAAQHHAGANIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -