Doo029095.1
Basic Information
- Insect
- Dicycla oo
- Gene Symbol
- -
- Assembly
- GCA_948252095.1
- Location
- OX411712.1:24678157-24680139[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-09 1.8e-06 28.6 0.1 1 36 18 53 18 58 0.91
Sequence Information
- Coding Sequence
- ATGCCAGGCAATAATAGTGATGGTGAGACGAAGAAAAAGAAGGGTGATTGGGATCCCGCCAATATGCATAAAGCTGTGGAAAAGGTGCTGAGTAATGAAATTAGTGCGCGTCGGGCTGCGGAAATTTATCAGGTATCCAGAACTACATTAAATGACAGAATTAGTGCAATTAAAAATAATAAAGAGGTGTCCATTAAGCCAGTTATGGGTCGTTTTCATAAAACTTTCTCATCTGAACACGAAGAAATTTTGGCAGAGCATGTTAAGGACTTGGCAAATAGATTGATGCCTTTAAACAAGCAGGAATTTCTTCGCCTTGCTTTTCAACTAGCTGAAAAGTTAAAATTACCTCACCAATTTAATAAAGAGAAGATGTCAGCGGGAAAGAACTACTATTATGCATTTATGAAAAGACACAGTGACTTATCATTGCGGACTGCTGAATCAACGAGTTTAATGAGAGCAGTAGGTTTTAACAGACCTCAAGTTGAACGTTTCTTTGAAGGCCTTGAGAATTTAATGCAAACATTTAATTTCACCCCCTATAAAATATGGAACTGTGATGAGACTGGTGTCAGTATTGTCCAGAAACATGCTAAAGTTTTAGCTACTAAAAACCAAAGGCAAGTTGGAAAACTAACTTCGGCAGAGCGTGGAAAAAACGTGACTGTGCTTTTTGCAATGAGCGCTGGAGGTCAGTTCGTACCACCATTCTTTGTATTCCCACGGTCCCGAATAAATGAAAGACTCATGATTAATGCACCACATGAAAGTGTAGGTGAAGCTCAGCCAAATAGCTGGATGAATGCAGAACTATTTTTGAAATGGATGGGTCACTTCACAAAGTATTCGACTCCTACCAAAGAAAACCCAGTCCTGTTGATTCTTGATGGGCATGCTAGTCATAAAGACTTGGATGTCATTGAATTTGCCAGAAAAAATCATATTCACATGTTAAGCACTCCACCTCATACAACCCATAAGCTACAACCGCTTGATCGAACGTTTATGAAGCCTTTTAAATCTGCTTACAGTGATGCATGTGACGTGTGGATGAGATCAAACCCTGGGATAAGAATCAGTGAATACGAAGTCGCAGGGTTTGTTGCTTCTGCTTTTAATCGAGTTTCTCGAATGGACATTGGCGTTAATGGCTTTCGTTGCACAGGCATTCACCCCTTTAATAAAAATGTTTTCAGTGATTTAGATTTTATAGCTTCGGATATGACTAATGTTACAGAAAATTATCAATCACCGTCAGAATCATCGCTCGCAAACTCTCAACTGCCAGAACCGACAACTTCCATTTTTGAACAACCAGAACTAACAAATTTATCCTCTTATCAGCAGCTAGAAATTACACCTCCAGGTCCTCAGCAATCGCAGTCTCAAACTGTCACTTTAGAGTCTGAACCTCAAACCGCTATCTCTCAACAATCCAAGTCTCGAGAAACTACCAATGATATCGACCTATCCCAATCGGTTGACAATTTTAAGGCAATAGTTGCAGAGTTGTCACTGGTCCCTGATGCTTCTAAAAGACGAGCTACTGCACGACGTCGCAAAGCTGAAAAAAGCGAAATTTACACAAGTTCTCCATACAAAAAGATGCTGGAACAGAAAAGATCAGATAAGAGTGTTAAGTCAGCTAAGCGAGGCAAAAGTTTGCTTTCAGGACAAGATACCAGCAAGAAAGGTAAGAACTTGGTTTCAGGAAAAGATGTCAGCAAGAAAGGAAAAAATAAGAAAAAAGAAAACCAGAGTCCTCCCCACAGACCGATCGAGGAAAAAACAATTTGTCCTTTGTGCCTTGAATCTCATGAAGAGGATTGGATTCAATGTGGAAACTGCAAGGTTTGGGTCCATGAGGCTTGTGCCAATATATCAGAGCTAACAAATCAATACATTTGTGATTTTTGTCTCGTATTGTACAACGTCCCAAAAATATGTCGCAACGAAATAAAACAAATGTGTCCAGAGTAA
- Protein Sequence
- MPGNNSDGETKKKKGDWDPANMHKAVEKVLSNEISARRAAEIYQVSRTTLNDRISAIKNNKEVSIKPVMGRFHKTFSSEHEEILAEHVKDLANRLMPLNKQEFLRLAFQLAEKLKLPHQFNKEKMSAGKNYYYAFMKRHSDLSLRTAESTSLMRAVGFNRPQVERFFEGLENLMQTFNFTPYKIWNCDETGVSIVQKHAKVLATKNQRQVGKLTSAERGKNVTVLFAMSAGGQFVPPFFVFPRSRINERLMINAPHESVGEAQPNSWMNAELFLKWMGHFTKYSTPTKENPVLLILDGHASHKDLDVIEFARKNHIHMLSTPPHTTHKLQPLDRTFMKPFKSAYSDACDVWMRSNPGIRISEYEVAGFVASAFNRVSRMDIGVNGFRCTGIHPFNKNVFSDLDFIASDMTNVTENYQSPSESSLANSQLPEPTTSIFEQPELTNLSSYQQLEITPPGPQQSQSQTVTLESEPQTAISQQSKSRETTNDIDLSQSVDNFKAIVAELSLVPDASKRRATARRRKAEKSEIYTSSPYKKMLEQKRSDKSVKSAKRGKSLLSGQDTSKKGKNLVSGKDVSKKGKNKKKENQSPPHRPIEEKTICPLCLESHEEDWIQCGNCKVWVHEACANISELTNQYICDFCLVLYNVPKICRNEIKQMCPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01359670; iTF_01359671; iTF_01359672; iTF_01359673; iTF_01359674; iTF_01359675; iTF_01359677; iTF_00932396; iTF_01341109; iTF_01341113; iTF_01422843;
- 90% Identity
- iTF_01359670; iTF_01359671; iTF_01359672; iTF_01359673; iTF_01359674; iTF_01359675; iTF_01359677;
- 80% Identity
- -