Doo033494.1
Basic Information
- Insect
- Dicycla oo
- Gene Symbol
- -
- Assembly
- GCA_948252095.1
- Location
- OX411730.1:8187621-8187989[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-13 1.6e-10 41.6 0.0 3 37 20 54 18 58 0.94
Sequence Information
- Coding Sequence
- ATGCCTCGAACTCAACTGTCACCAAAGCCGAAGTCGAAAAGAAAAACTTGGGCCAGGAATAATATGATTGAAGCTGTAAAAGCAGTAAGAGAAAAGAAAATGGGTTTGAAAAAAGCGGTCAAGCTTTATAATGTTCCAAAAACTACTCTGCAAAGGTTTGTGCACAGTGAACAGCCTCCCGATGAGGTTGTAAATACTACTATAGGAAGAAGACCTGTCCTGCCATCTCACCTTGAAGAAAGCCTTGTGTCATACCTTCTCGTTATGGAAAGTAAATTCTATGGCTTGACCCGTCAGGATGTTCGTAAAATGGCCTATCAGTTGGCTGTGAAAAATAATGTCGAACATTCGTACCACAAACGAAGATGA
- Protein Sequence
- MPRTQLSPKPKSKRKTWARNNMIEAVKAVREKKMGLKKAVKLYNVPKTTLQRFVHSEQPPDEVVNTTIGRRPVLPSHLEESLVSYLLVMESKFYGLTRQDVRKMAYQLAVKNNVEHSYHKRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164251; iTF_00164252; iTF_01507102;
- 90% Identity
- iTF_00164252;
- 80% Identity
- -