Dsac022066.1
Basic Information
- Insect
- Diatraea saccharalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_014843785.1
- Location
- JACGTY010002186.1:22613-27004[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 17 0.01 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 17 3.1e-07 0.0046 17.6 15.9 3 19 186 202 185 202 0.95 4 17 0.069 1e+03 0.6 1.1 1 8 227 233 227 234 0.88 5 17 1.7e-08 0.00025 21.7 10.8 1 19 237 255 237 255 0.93 6 17 0.85 1.3e+04 -2.9 0.8 6 10 280 284 279 284 0.91 7 17 2.6e-09 3.9e-05 24.3 11.4 1 19 290 308 290 308 0.99 8 17 4.2e-06 0.063 14.0 17.1 3 19 345 361 337 361 0.86 9 17 2 3e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 17 3.8e-05 0.56 11.0 19.8 1 18 395 412 395 413 0.97 11 17 4.1e-10 6.1e-06 26.8 11.8 1 19 422 440 422 440 0.99 12 17 7.7e-05 1.1 10.0 5.9 9 19 488 498 486 498 0.91 13 17 0.015 2.3e+02 2.7 8.1 3 12 509 518 508 518 0.92 14 17 0.31 4.6e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 17 1.2e-05 0.18 12.6 4.2 1 11 588 598 588 599 0.97 16 17 4.2e-05 0.63 10.8 13.2 4 18 630 645 628 646 0.86 17 17 1e-06 0.015 16.0 8.7 1 18 687 706 687 707 0.86
Sequence Information
- Coding Sequence
- ATGGCGAGACGTTATCGGGATGTGGCCGCAAAAATGCAACAAAACGTGCAAAAGCATCTAAAAGAAATGAAAGAACTCTCATCTTCTGAAGATGAGGAGCCATACGAGTCTAATGTATTGGATGGCGTGTTTCAGTCCTACAGAACCGGCGGCGGCGATATCACAAAATTGGATCGGACCAGGCATCTTTTGGAAGAGGCTATAAGCGGTAAATCCGTTACCTGCCTCATCTGTATAGGTTCTATTAAACGAGTAGATGCTATCTGGACCTGTGATCATTGCTATTGCTATTTCCATATGTCATGTATACAGAAATGGGCTAAAGATAGCGTTAGTCTCAAAAATGAAGAAGCTCAAGGACCTATTTCCGTAAACCTGCCTAGAAAAATAGAATGGTGTTGTCCGAAATGTCGACAGTCGTACAATAAAGATTTAATACCGCGGAGGTATAGATGTTTCTGTGGAAAAACTGATGATCCACCGTACCACCCTTGGCTGATACCACACACGTGCGGTGAGGTTTGTGGTAAACGTTTATCTTCATCTGAGAGTTGTAAGCACAAGTGTCTTTTGCTCTGCCATCCGGGGCCGTGTCCACCATGTCCTCAAATGGTGAACGGGGCATGTTATTGTGAAAAAGAATGTAAGAAGGTTAGATGCAGTGCAGCAAAGTGGTCATGCGGACATCCTTGTAAGAGAATTCTTCTATGTAATTCTCATAAGTGTGAAAATATCTGCCACGAAGGAGATTGTCTTCCCTGTAGTTATGTTAGTATTCAATCATGTCAATGTGGCTCTGAGAAAACTAAAAGACCATGTAATGATCCTTTGTGGCATTGTAAGAAAGTTTGCAATAAACCTTTCAGTTGTGGCTACCATAATTGCTCGAAAGTTTGTCATTCTGGTGACTGCGGAATGTGTCCTAATTCTGGTATGAGATCATGCCCATGTGGGGCAAATCAGAAATATGTTGAATGTCCTGATACTATGGAGACTTGTCTAGGAACTTGTGGCAAGAAACAAGATGACTGCGAACACAACTGCCCCGAGAAATGTCATAAAGGCACATGCCCTCCTTGTCAAGTTTTAATTGAAAAGCAATGCCAATGCCTATCCCACACTAGAATGCTACCATGTAGCAAAGAATACAAATGTGAAACAAAATGTAGGGGTGTTAGACCGTGCGGTAAGCATGGTTGTGGCCGTAAATGCTGTAATGGAGATTGTCCTCCATGTGAAAAATTATGTGACAAACCTTTACAGTGCGGCAGACACAAATGTTTGATGGTTTGTCATAGTGGACCATGTTATCCTTGTCCAAGAGCATCTAAAGTAACCTGCAAATGTAAAGAAACTTACGTAACAGTACCATGTGGGAGAGAAAAACATATCAAACCTCCAAGATGCAATCTACCATGTAAAATTAAATACAAATGTGGCCACATCGAAGAAAACCGGCATACCTGCCACTTTGGAGATTGTCCCCCATGTAAAGCTATCTGCAGCAAAAAGTATACAAAATGTAACCATGAATGTAAAGCTACCTGTCATGAATATGTAGCAGTAGTTTTCAAACAAGTTGAAAAGCCAGCAACACCTTGGGAAATAACTCCTCCGAAAACCAAAATAATGACCTTGGACTGCCCTCCTTGTGAGACACCTGTCCCTGTAATATGTTTTGGGGAACATGAGACAGAAAGTCTACCCTGTCATTTAGCTAAAAGACGTTGCTGTGGAAGAATATGTGGTCGTCCTTTAGCCTGTGGTAATCATTCCTGTTCTTTACTTTGTCATTTATATTCACCAAATCCTGATTACATCAACTTGCCATACACTTGTAAGCAGTGTGACGGAGAATGTGTAGCACCTCGCCCAGACAAATGCCTACATAAGTGTGCAAGACGGACATGCCATCCAGGGTCATGTCCCCCATGTGATATATTTGAACGTGTTGCTTGTCATTGCGGTGTGACCGAATTCTATTTGCGATGCCGTGAAGTCACTACTGCCAGTGAAGAAATGTTATCTTGTAAACAACAATGTTCAAAGAATTTGGAATGCGGTCATCGTTGTCGAAACATATGTCATTCAGGCTTGTGTCAGGATAATCAAGTATGTAATAAGAAGACTAAAGTACATTGTCCTTGTGGTAATCTGCGCAAGGAGGCTCCTTGTAATCTTGTGAGAAATGGAGAAGTACAACTAATATGCAATGATATTTGTGAAGCAAAGAAGGTTGCGTCTCAGATGGAGAAAGAAAAAGAATTACAGAGATTAAAAGAAATAGAAGAAGAGAAAAATCGTAAAGAGCTAGCAGAGTATGAATGGAAATTGAGTGGAAAGAAAAAGAAATATAAAGAAAAGAAAATTGTTCAGAATATAGACAATAGAAATATTTTTCAGAAATATTGGATTCTTATTGTATCTGTTTGTATTACAGTAGTTGGTGCTCTTTATATGATAATAGAAGTATGA
- Protein Sequence
- MARRYRDVAAKMQQNVQKHLKEMKELSSSEDEEPYESNVLDGVFQSYRTGGGDITKLDRTRHLLEEAISGKSVTCLICIGSIKRVDAIWTCDHCYCYFHMSCIQKWAKDSVSLKNEEAQGPISVNLPRKIEWCCPKCRQSYNKDLIPRRYRCFCGKTDDPPYHPWLIPHTCGEVCGKRLSSSESCKHKCLLLCHPGPCPPCPQMVNGACYCEKECKKVRCSAAKWSCGHPCKRILLCNSHKCENICHEGDCLPCSYVSIQSCQCGSEKTKRPCNDPLWHCKKVCNKPFSCGYHNCSKVCHSGDCGMCPNSGMRSCPCGANQKYVECPDTMETCLGTCGKKQDDCEHNCPEKCHKGTCPPCQVLIEKQCQCLSHTRMLPCSKEYKCETKCRGVRPCGKHGCGRKCCNGDCPPCEKLCDKPLQCGRHKCLMVCHSGPCYPCPRASKVTCKCKETYVTVPCGREKHIKPPRCNLPCKIKYKCGHIEENRHTCHFGDCPPCKAICSKKYTKCNHECKATCHEYVAVVFKQVEKPATPWEITPPKTKIMTLDCPPCETPVPVICFGEHETESLPCHLAKRRCCGRICGRPLACGNHSCSLLCHLYSPNPDYINLPYTCKQCDGECVAPRPDKCLHKCARRTCHPGSCPPCDIFERVACHCGVTEFYLRCREVTTASEEMLSCKQQCSKNLECGHRCRNICHSGLCQDNQVCNKKTKVHCPCGNLRKEAPCNLVRNGEVQLICNDICEAKKVASQMEKEKELQRLKEIEEEKNRKELAEYEWKLSGKKKKYKEKKIVQNIDNRNIFQKYWILIVSVCITVVGALYMIIEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00683858;
- 90% Identity
- -
- 80% Identity
- -