Basic Information

Insect: Diatraea saccharalis
Gene Symbol: -
Assembly: GCA_014843785.1
Location: JACGTY010007980.1:1-16100[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.019 26 5.7 1.2 18 30 8 21 2 31 0.74

2 15 0.0044 5.9 7.7 2.0 6 38 25 57 24 63 0.76

3 15 0.015 20 6.0 3.0 5 34 52 77 51 91 0.81

4 15 0.027 36 5.2 2.2 15 33 89 108 77 114 0.72

5 15 0.011 15 6.4 3.2 5 38 108 141 104 142 0.78

6 15 0.00066 0.89 10.3 0.6 5 38 136 169 134 176 0.84

7 15 0.059 81 4.1 5.7 13 38 171 197 164 204 0.80

8 15 0.034 46 4.9 4.9 13 38 199 225 192 226 0.79

9 15 0.0032 4.4 8.1 0.9 17 38 231 253 226 254 0.88

10 15 0.018 24 5.7 1.5 19 38 261 281 258 282 0.86

11 15 0.013 18 6.2 4.5 9 33 280 304 276 309 0.76

12 15 0.0047 6.4 7.6 3.5 6 34 305 333 304 343 0.79

13 15 0.00031 0.42 11.4 4.1 6 38 333 365 330 371 0.88

14 15 0.013 18 6.2 2.4 8 38 363 393 361 393 0.82

15 15 9.7 1.3e+04 -3.0 1.3 19 25 478 484 471 484 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.019	26	5.7	1.2	18	30	8	21	2	31	0.74
2	15	0.0044	5.9	7.7	2.0	6	38	25	57	24	63	0.76
3	15	0.015	20	6.0	3.0	5	34	52	77	51	91	0.81
4	15	0.027	36	5.2	2.2	15	33	89	108	77	114	0.72
5	15	0.011	15	6.4	3.2	5	38	108	141	104	142	0.78
6	15	0.00066	0.89	10.3	0.6	5	38	136	169	134	176	0.84
7	15	0.059	81	4.1	5.7	13	38	171	197	164	204	0.80
8	15	0.034	46	4.9	4.9	13	38	199	225	192	226	0.79
9	15	0.0032	4.4	8.1	0.9	17	38	231	253	226	254	0.88
10	15	0.018	24	5.7	1.5	19	38	261	281	258	282	0.86
11	15	0.013	18	6.2	4.5	9	33	280	304	276	309	0.76
12	15	0.0047	6.4	7.6	3.5	6	34	305	333	304	343	0.79
13	15	0.00031	0.42	11.4	4.1	6	38	333	365	330	371	0.88
14	15	0.013	18	6.2	2.4	8	38	363	393	361	393	0.82
15	15	9.7	1.3e+04	-3.0	1.3	19	25	478	484	471	484	0.85

Sequence Information

Coding Sequence: ATGACTCAAGATAAGCCGTACGCTTGCACCACTTGCCACAAGACTTTCTCACGTAAAGAGCATCTCGACAATCATGTCCGCAGTCACACTGGGGAAACGCCTTACAGGTGTGAATTCTGCGCTAAGACGTTCACACGTAAAGAGCATATGGTGAATCATGTTCGCAAACACACCGGCGAGACGCCACACCGCTGCGAAATATGCAAGAAGAGTTTCACCAGGAAAGAGCATTTCATGAACCATGTCATGTGGCATACGGGTGAAACGCCCCACCGCTGCGATTTCTGTTCTAAAACATTCACCAGAAAAGAGCACTTGCTCAATCACGTCCGGCAACACACGGGCGAGTCGCCGCATCGATGCAACTTCTGCGCGAAATCATTCACTAGACGAGAACATCTCGTCAATCATGTACGACAGCACACCGGCGAGACGCCCTTCCAATGCGGATATTGCCCTAAGGCTTTTACAAGGAAAGACCATCTCGTGAATCACGTAAGACAACACACCGGCGAGTCGCCTCACAAGTGTTCGTTCTGCACGAAGTCATTCACACGCAAGGAACACCTCACGAATCACGTGAGGCAACACACCGGCGAGTCGCCTCACAGATGCAGTTTCTGCGCCAAATCGTTCACTAGAAAAGAACACCTCACAAACCATATCAGACAGCATACGGGAGAAACGCCGCACAAATGCACGTATTGCCCGCGCGCGTTTTCGCGGAAGGAACATCTGACGAATCACGTGCGTCAACACACCGGCGACATGCCATTCTCCTGTACATTCTGCAGCAAGACATTCAACAGGAAAGAGCATCTTGTAAATCATATCAGGCAACATACAGGCGAGACCCCGTTCAAGTGCACTTACTGCTCGAAGTCGTTCTCGCGCAAGGAGCACCTCACGAACCACGTGCACCTTCACACAGGCGAGACACCTCACAAGTGCGCGTTCTGCACTAAGACTTTCTCCAGGAAAGAGCATTTGACCAATCATGTCAGAATACATACTGGTGAATCTCCTCACCGCTGCGAGTTCTGTCAAAAGACATTCACTCGTAAGGAACACTTGACAAACCACTTCAAGCAGCACACGGGTGACACGCCGCATGCTTGTAAAGTATGCTCGAAACCTTTCACCAGGAAAGAACATTTAGTCACGCATATGAGATCGCACAGCTGCGGCCAGAGGCCGTTCAGTTGCGGCGAGTGCGGCAAGTCATTCCCTTTGAAAGGAAATCTTCTGTTCCACGAGAGGTCACATAATAAGGCCAGCGGTGCCACTGGCGCTAGGCCTTACCGGTGTGACGTCTGCTCCAAAGACTTCCTATGTAAAGGTCACCTAGTGTCTCATCGGCGAACGCATACAGAAACGGGTGACGCCCCCACTACAGGAGATGCACCGACTGAAAATGAAGACTGTGGAGATTGCAATAAATGTGATAAGATTGATCCCGAGCGACCTGAAAGAAAACATGAAATCAGGCCGACGACAGAAAATAGACCAGCAGAAAATAATGTCACTCAAACTCAACAAAGCAACCCAGCTGTGATGCAAATAACGAGTCAGGAGGTTCGCGCGGCGGCGGCGGCGACGAGTGCGCCAAGTGTACCTAGCACATTCACTGTGAGCGGTCAACACCACGCCGGCGCCACGCTCTCACATCATCCCGTCACTGTCAACTACTAG
Protein Sequence: MTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSFCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLTNHVRQHTGDMPFSCTFCSKTFNRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHFKQHTGDTPHACKVCSKPFTRKEHLVTHMRSHSCGQRPFSCGECGKSFPLKGNLLFHERSHNKASGATGARPYRCDVCSKDFLCKGHLVSHRRTHTETGDAPTTGDAPTENEDCGDCNKCDKIDPERPERKHEIRPTTENRPAENNVTQTQQSNPAVMQITSQEVRAAAAATSAPSVPSTFTVSGQHHAGATLSHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00448339;
90% Identity: iTF_00448339;
80% Identity: iTF_00448339;