Dsac025845.1
Basic Information
- Insect
- Diatraea saccharalis
- Gene Symbol
- -
- Assembly
- GCA_014843785.1
- Location
- JACGTY010008999.1:669-5422[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-10 1.4e-06 28.6 0.0 4 43 68 107 66 109 0.92 2 2 1.3 1.8e+03 -0.6 0.0 7 20 109 122 106 123 0.82
Sequence Information
- Coding Sequence
- ACTTGGGTCCGAAAGACGTGTGGGAAAGAGCTAGCTATAGTAAACGGTTACACATTTTACTTGCACAAAGTGAATTCAAAGACAAACACATGGAAATGTACCAACGGGAAGTGCAAAGGCCGTTTGACTACAACCAATGATATGTATCGCTCATTGGTGCAGTTAATCTGCGGCAAACAGAGGCGTCAGTGGAACCAGGCGAACATGGTACAGGCAATAAAAGACTTGAGAGCGAAAAGGATGGGCCTGAAGAAGGCAGTGCAGATATATTCTGTGCCGAAGACGACACTGAGAAGATTCGTACACAGTCATTTGACAGCGGAGGAAGCTGTCAAAATTTGCATGTCACGCAAAATGAATACCCAGAGAGGCATGAAAGACGATGATGAGAAATGA
- Protein Sequence
- TWVRKTCGKELAIVNGYTFYLHKVNSKTNTWKCTNGKCKGRLTTTNDMYRSLVQLICGKQRRQWNQANMVQAIKDLRAKRMGLKKAVQIYSVPKTTLRRFVHSHLTAEEAVKICMSRKMNTQRGMKDDDEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -