Dmen024559.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diarsia mendica
Gene Symbol
nfxl1
Assembly
GCA_949316265.1
Location
OX438898.1:22303609-22306089[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1 5.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 16 0.0031 1.8e+02 3.9 0.8 4 13 169 178 168 179 0.86
3 16 5.6e-08 0.0032 19.1 15.7 3 19 186 202 185 202 0.95
4 16 2.8e-07 0.016 16.8 8.4 3 18 239 254 237 255 0.92
5 16 8.4e-08 0.0048 18.5 15.0 1 19 290 308 290 308 0.99
6 16 2.2e-06 0.13 14.0 19.0 3 19 345 361 337 361 0.86
7 16 0.62 3.6e+04 -3.4 0.4 7 11 365 369 365 369 0.84
8 16 3.3e-05 1.9 10.2 20.3 1 18 395 412 395 413 0.97
9 16 2.2e-10 1.3e-05 26.7 14.0 1 19 422 440 422 440 0.99
10 16 0.0001 5.9 8.6 6.4 9 19 488 498 486 498 0.89
11 16 0.00094 54 5.6 6.7 1 12 508 518 508 518 0.90
12 16 0.17 9.9e+03 -1.7 3.6 14 18 547 551 547 552 0.87
13 16 0.05 2.9e+03 0.1 0.5 7 12 567 572 567 579 0.83
14 16 3.1e-06 0.18 13.5 5.2 1 11 588 598 588 599 0.97
15 16 4.6e-05 2.6 9.7 12.8 4 18 630 645 628 646 0.86
16 16 3.6e-06 0.21 13.3 11.8 1 16 687 701 687 706 0.92

Sequence Information

Coding Sequence
ATGGCGCGCAGATATAGGGACGCCGCTGCAAAAATGCAGCAAAACGTCCAGAAACATCTTAAAGATATGAAAGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAGTCTGGCGTCTTGGAAAGCATGTTCCAGAGCTACTGGCGTGGCGGTGGCGACACTCAAATGCTCAATAGAACCAAGAACCTCCTTGAAGAAGCCATCAGCGGCCGCTCAGTTACGTGTCTCATATGCATAGGATCCATCAAAAAATCTCACGCTATTTGGACTTGTGAGCATTGTTTTTCATATTTCCATCTATCTTGCATTCAAAAATGGGCGAACGATAGTATCAGTTTACGTAGCGAAGAAAGTACGGGTCCGATAGCTGTTATAAAACAACAGAAAATTGAGTGGTGCTGCCCAAAGTGCCGTAACTCTTATTCAAAGGAAGAAATACCTCGAAAATATCGCTGTTACTGCGGCCAAACTGAAGACCCACCGCACCATCCTTGGCTTATTCCTCATACCTGTGGTGAAGTCTGTGGGAAGGGGCTATCTACTGGTGATAATTGTAAACATAAGTGCATATTGCTTTGCCACCCTGGTCCGTGCCCTCCGTGCCCACAAACTGTTAACGGCATTTGTTTTTGTGAGAAGGAACGCAAGAGAGTGAGATGCAGTGCTGCTAAATGGTCCTGTGGTCAAAAATGTCTAAAATCTCTTCTATGTAAAACTCATTATTGTGAAAATGTCTGCCATGCGGGTGACTGTCATGAATGCGGCCACACTAGCAATCAGCCATGTCAATGTGGTTCTGAAAAGGCTAAGAGACCATGCAATGATCCGTTCTGGCAGTGCAAGAAACAGTGTAATCAATTATTTTCATGTGGTTATCATAAATGTGACAAAATCTGCCATTCTGGCCACTGCGGTGACTGTCCTAACTCAGGCACATTGTCATGTCCATGTGGTGCCAACCAGCGCTTTGTCCAATGTCCAGATGTTATGGAAACCTGTCTAGGAACTTGTGGAAAAAGGCATGAAGATTGTGAACACAAATGCCCAGAAAAGTGCCACAACGGGAACTGCCCACCATGCCAAGTTTTAATTGAGAAGAAATGCCACTGCTCAACACATACAAGGTCCCTTCCTTGTAGCAAGGACTTCAAATGTGACACTAAATGTAGAGGTATAAGACTGTGCGGAAAACATGGTTGTGGAAGAAAATGTTGCAATGGTAACTGCCCACCATGTGAGAAAACATGTGACAAAGGCCTCCAATGTGGTCGGCATAAATGTACAAATATCTGCCATCGTGGACCATGCTATCCATGCCCTCTAGAATCTAAAGTAACTTGTAGATGCAAAGAAACTTATGTCAGAGTCCCCTGTGGACGGGAACGGCAGACTAAACCTCCAAAATGCAACTTGCCTTGCAAAATAAGGTACAAATGTGGTCACAGcgaagaaaataaacattcatGTCATTTTGGTGATTGTCCACCCTGCAAAGCAATCTGTGACAAGCAATATCCTAAATGTAGTCATAATTGTAAATCGGTGTGTCATGAATATGTTCCAGTGCTGTTCAAACAAGTAGAGAAACCTGCCACCCCGTGGGAAGTGCAACCTCCTAAGACTAAGATCATGACCTTAGACTGTCCACCTTGTGACACCCCAGTACCAATGGTTTGTTTTGGAGAACATGAAACAGACCAGCAACCTTGCCACTCAGCTTCTCGGAGGCCTTGCGGAAGAGAATGTGGCAAACCATTGGCTTGCGGAAACCACAAATGCAATTTACTCTGTCATCTTTATAGCCCTCTTCCTGAGTATCCTAATGTGCCTTCCACTTGTAGGCAATGTAACAGAGAATGTTCAGTTCAGCGCCCTGAAAAATGTGCTCATAAGTGTTCAATAAGGGCTTGCCATCCTGGACCGTGCCGACCATGTGAGATACTTGAACGTTTAGCATGCCACTGTGGAGTGACTGAGATATACTTACGTTGTCGTGAATTGTCTGCAGCTACCGAAGACATGTTATCATGTAAGCAACAATGTCCTAAGAACTTGGAGTGTGGTCACCGCTGCCGGAACACTTGCCATTCAGGAGCTTGTGGCAACCAATTATGCACTAAGAAAACTAAAGTCCTCTGCCCATGTGGTAACATAAGAAAGGAGGCCCCATGCAATTCAGTTAGAAAGGGAGAAACAAAGATTCTTTGTGACCAAACCTGTGAAGCTAAGAAAGCTGCTGCTAAAATAGAACAGGAGAAAGAGAGGCAGAGATTGAAAGAGTTAGAAGAAGAAAAGAATCGTAAAGAGTTAGCAGAGTATGAATGGAAATTAAGcgggaagaagaagaaatataAGGAGAAGAAAATGGTTGTTGATAAAGGCAACCATGGTTTCCTAAAGAGGTATTGGGTTCCATTAACATCATTCTTAGTAACAATGCTAGcttctatttattatatattttatgtaggaTTAGAATAG
Protein Sequence
MARRYRDAAAKMQQNVQKHLKDMKELSSSEDEDPCESGVLESMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCEHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCYCGQTEDPPHHPWLIPHTCGEVCGKGLSTGDNCKHKCILLCHPGPCPPCPQTVNGICFCEKERKRVRCSAAKWSCGQKCLKSLLCKTHYCENVCHAGDCHECGHTSNQPCQCGSEKAKRPCNDPFWQCKKQCNQLFSCGYHKCDKICHSGHCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEDCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCDTKCRGIRLCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIRYKCGHSEENKHSCHFGDCPPCKAICDKQYPKCSHNCKSVCHEYVPVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPMVCFGEHETDQQPCHSASRRPCGRECGKPLACGNHKCNLLCHLYSPLPEYPNVPSTCRQCNRECSVQRPEKCAHKCSIRACHPGPCRPCEILERLACHCGVTEIYLRCRELSAATEDMLSCKQQCPKNLECGHRCRNTCHSGACGNQLCTKKTKVLCPCGNIRKEAPCNSVRKGETKILCDQTCEAKKAAAKIEQEKERQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVDKGNHGFLKRYWVPLTSFLVTMLASIYYIFYVGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01440670;
80% Identity
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