Dmen015428.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diarsia mendica
Gene Symbol
Sall1
Assembly
GCA_949316265.1
Location
OX438893.1:23139419-23159345[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 5.9 8.2e+02 2.4 0.3 2 23 6 27 5 27 0.95
2 21 0.09 13 8.1 1.9 1 23 1014 1037 1014 1037 0.92
3 21 5.5e-05 0.0076 18.2 2.5 2 23 1142 1163 1141 1163 0.97
4 21 0.00034 0.047 15.8 3.5 1 23 1169 1191 1169 1191 0.99
5 21 0.014 2 10.6 2.5 2 23 1198 1219 1197 1220 0.95
6 21 0.62 87 5.5 0.4 5 22 1233 1250 1232 1250 0.92
7 21 0.62 87 5.5 0.4 5 22 1316 1333 1315 1333 0.92
8 21 0.62 87 5.5 0.4 5 22 1399 1416 1398 1416 0.92
9 21 0.62 87 5.5 0.4 5 22 1482 1499 1481 1499 0.92
10 21 0.62 87 5.5 0.4 5 22 1565 1582 1564 1582 0.92
11 21 0.62 87 5.5 0.4 5 22 1648 1665 1647 1665 0.92
12 21 0.62 87 5.5 0.4 5 22 1731 1748 1730 1748 0.92
13 21 0.62 87 5.5 0.4 5 22 1814 1831 1813 1831 0.92
14 21 0.081 11 8.3 1.5 5 23 1897 1915 1896 1915 0.96
15 21 0.035 4.9 9.4 1.1 3 23 1922 1943 1921 1943 0.96
16 21 0.0045 0.63 12.2 0.4 2 23 1961 1981 1960 1981 0.97
17 21 0.0013 0.19 13.9 1.0 1 20 1987 2006 1987 2009 0.89
18 21 0.00085 0.12 14.5 0.2 1 23 2017 2039 2017 2039 0.98
19 21 0.01 1.4 11.1 7.2 1 23 2045 2067 2045 2067 0.98
20 21 1.3e-05 0.0018 20.2 1.4 1 23 2073 2097 2073 2097 0.98
21 21 0.00082 0.11 14.5 4.1 1 23 2103 2125 2103 2126 0.95

Sequence Information

Coding Sequence
ATGGACCAGCTCGTGCAGTGCCCCGTGTGCACGCTGTACCTGCACAATGGGATGTCTCTGGAGTCCCACTTGGACACCCATCCCAAAGACCAGGTTATAAAAGCTTTGTGTTCTATAGCACACAAGGGGTCTAATTATGCCAGCAGGACTTCCACGCCGGCGCATTCTGAGCGCTCATACAGGAGCAGGTCTCGAACACCTGCCACCGACGACAGTGCCAAGTGGACTGGGTCACGTAGTGCTGACCACGAGCGCTACTGGCGCAGAACCCCTAGTAGAACCTCCAAATCAACACCAGTGTCAAATCCGTCTAGACATGGTACTCCTGATATTAGAATGCTCGATGTTAACTTTGAGAACCATGGAATTGCTGGTGGTGGTGCAGGACAACATGCAAGCAATCCATTTAATCTAAAAGCTGATAAACTTCAGCAGACCTTCCAGTGTCCTCCAGTCCCCGAGTTTGATGGACAGTTTGTTTACTACCCAGAGCAACAAGAGGACCGAGAGGTCAAGTATTCCCGCAGTGCTGAATACAATGCCTTGGACAATAGCAACAATATGTTCTCTTACCATGTACCACCTATGGCAGCACCAGGTATGAAATTGTTACCAGGGGCTTCTAGGAAACCAAATGACCTTGTTAAACTTCTACCAAAACCAAATAACATACTCCTTAAAACCAATATGGGCGGTGTGCAATACATAGGTTCAGGGATGAAACCCATGCATGTCATGGTGCCTCCGCCACCTACATTCATGCAGAAGAATATGCAGAACAACATGATCATGACTGGCAGTGTACCGAGCCCACAAATGCATGTTGATACCAAAACAACTTCACCTCATCCTATAGCTAACAACCAAGTGAACCAAATGACTACTAGTGCTTACACTCCAGGAACAACTGTTGTTACCCAAAACTCCCAAATCATTTACCGAGAAATGGTGCACAACATAGATGGTAAGAACTTTATAACCACCATGCCCACAGTCCTTGGTGGTCCTGACAATGTTGCTAATTTAGCTCAGGCTAGCTCCATGTATCAAAATGTTATGGTTGTAGATCAGTTTGGCAATACTTCATGTATGTATACAGCACCTCAGCAAATGATGAATAAAACATGTCCCACATCCATTTATAATGAGTCTGGAACTTCTGGGGTACCTAGTGTACAAGATAAATCTGTTCAAAGTATGCCAGATCCGAAAACACTTATCATTGAGGTTGGTCCACTCATAGGTCCTGCACATGATAATATTTGTGAACAACGTAGCCCTAGGGTACTACAGCCACAGCCGCAGCAGGTTGTCAGTACTGAAGTTGCCAGCATTGAGTCTCCGGTTGAGACAGTGGACCCAAAATATGAAATGCCTAGTGGTactaaaggtttaaaaattctGAGTAACATTAAGGTTGAAGTTCCTGTGCAACATAACAAGAACATGGTCAATACTGTCATGGATCTAACTGGGCCTAATGAGGCAGATTACCCTGTGGAACGTGTAGCATCACCTGAAAAGATCCTGCCAGATCTAGAAGATAACAATCCATTGTCATCTGATGACACTCAGCCATCGTCATGTCAATCCACGTCCAGCGGTGACAGCATGGTCTCTCatacattttctgtgataaagaACGTTGGTAATCCAAGCAAAAGTTCTGATAGTAAGTTGGACACGGACTTTTCGGACAGCTGTCCTGTGCCAGATTTAATTTGTAATGAAAAGCCTTCCATATCACCTTGTAGCGAGTTGTCAGAAAATGGTGACAATTCAACCGATCATACCTCAATATCTCCCAAACCTGAAAGTAACCAAGTTAGCCATAGTAACCTAGGACTTCCAGAAAAGAAAATTCAGCTTTCACAGAAGCCATACAGGCACAACACACTAAGACTGAACAATATTTTTGTGAAGAAGCACAAGAAAGTGTTGCAGATTAAGAATGTTAAGGCATTTCCTGTGAGCACTGCAAGGAAATCTGAACAAAGAGACACCATTCCGACGTCATCTACCTGCAAATCGCCGGAAAATTTTACCATGAATAAAATGCACCAAACAGATAGGACAGATTGTAGGGAAAAGACTAATCTCTTGCAAACCATATCAGTTGAGGAGATCAAAGATAATGATGAGCATAATGACTTTGATGCTGACACGTCAGAACAATCCATGGACATAGAAACACTAACAGCTAATGATTTGGAAGAGCCGGAGTTTGTTGCGAGTCTTGATAATATGATTGAGGTGAAAGAGGAAATAAACTCGAGCAATGAAGGAGCGTTCAGTAACGAGCCAGTGACGACGGACCGCATGCTGACTCCACTGGAATCATTACGACCTATTAATGTTATTAACTATGGAAATCTGTCCAGTGAGGATTTTAACGAGGAGTCTACCGACAGGGAGTTACTGGACCTTGAAGCGGCGTCTAAAAACAAACAGTTTGTTAGCATGATGAACGAAAATTATTTCGGTGACAATATTTACGCAGATTACTTTACTGCCGACCGCGTGGAGGCGTTCGACGCCGAGCGCGAGGCGGCGGTGTTAAAGGAGGGCCCTAAGGACGGTATGTACCTCTGGGGCGAACCTTCGCAGAAGGAAAACGAGTTTGTACTACCTAACTTTATACACGAGAGTTACAAAATAGCTGAGAGTACTGGGATTGATTATTCTGAGCTAGGTGCTAGACCAGTCCCGGTGGACGGGTGCGAGCCGGACAGCAAGGCGGACGTGCTGAGCGAGCGCAGCGAGAGCGACGCGCCCATCAACATCTGCGCCGACGAGCGCATGCCTCCGCGCGGCGAGCTCAGCGGGCAGGAGAGCAACGGAGACATGGAGTCGCCCTGGAGCGGGATATATACAGATGTGACCCCTCCCGAGACCTACGATCTAATCGCCCGGGAGCCGAGCTGGGTGTCTGACGCATCAGATGTCGACTCGAACGAGAAGCGGGAGACCATCGAAGATCTGCAGCTGCCGCTGGCCCCGGTGCTGCCGCTGCCGCCTACGTTCGCGCGGCACCGCGTGCACAcgtgcggctcgtgcggcgTGACGTGCACGTCGCTGCGGGAGCTGCGCGCGCACAAGTCGCTGGTGCACGCGCTGCCCACGTGCTCGGCCAGCAAGACCTCCTACAGCCGCCTGGTCACGCAGCGCGCTATCAAGAAAGAGGAGAAACCTGATACAAAAAACTTACTGCCGCCAATAATAGACTCTAAAGACGTGATATCGTCGACGATGCTCGAAGTTTACCAGAGTATACAAGCCCAggagtccaagcccaagatcgAGGTAGACCGGCTGATCAAGCAGGAGGTGAGGCGGAGACGGAAGGACTATGTGTGTCCTACGTGTAAGGTGGACCAGGGTACTGATGCGCAGTTCCACCTGCATCTCAAGATCCATCCGCTGGAGTGCCTAACCTGTGGCAAATGCTTCTTCAGGAGAGCCAACCTGTCCCTGCATATAAAGACACATTTAGGAATTAAGAATTATAAATGCGAGGTGTGCGAGAAGCGGTTCGTGACGCGGCAGAAGCTGTCGGAGCACCACAACACGCACACAGGCCGCGCGCCCGTCAAGTGTACCGTGTGCGACGATACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGCCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGTACTCTATACGTACATGTTGTTAGTTAGCTACACTGTAACGTCCATGTGTAGGGACCGCCACCACCTGCAGAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCctggtgttccactcgcgcgCCAAGCTGCGCTGGCACCAGGAGACGCACGCAGACAGACCGCGCGCGTGCCTGTACTGCAGCGACAAGTTCGTGCACGCCGCGTCTCTCACGCGCCACGTGCGGCGCTCGCACAACGAGTACTACCTCGCCGAGCGACACAAGGGCAAGCAGCAGGAGAACGTGCAGTGTCCCGTCTGCAAACAGGTGTACCTTCGCTCCAACCTGCGCACGCACCTGCTGACACACAGCGGCCAGCGCCCCTACATGTGCATCATCTGCAACAAGTCGTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACGCGTCGCGCTCGGCGAAGCCCTACAAGTGCGGGCTGTGCAAGGGCGCCTTCATCCGCCAGTCGGAGTACATCTCGCACATGAACGCGCACAAGTCCGTGCGGCCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGATGGCCAAGAAGTACGTGTGCAAGGTGGCCGAGTGCGGCAAGTCGTTCCACCGCAGCTACTACCTGTCGGAGCACATGAAGGTGCACTCGGGCGCGCGGCCCTTCGCCTGCAACATCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTGCGTATACACCACGCGCGCGAGCCTGTCGCCACCGAGGCGTAA
Protein Sequence
MDQLVQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCSIAHKGSNYASRTSTPAHSERSYRSRSRTPATDDSAKWTGSRSADHERYWRRTPSRTSKSTPVSNPSRHGTPDIRMLDVNFENHGIAGGGAGQHASNPFNLKADKLQQTFQCPPVPEFDGQFVYYPEQQEDREVKYSRSAEYNALDNSNNMFSYHVPPMAAPGMKLLPGASRKPNDLVKLLPKPNNILLKTNMGGVQYIGSGMKPMHVMVPPPPTFMQKNMQNNMIMTGSVPSPQMHVDTKTTSPHPIANNQVNQMTTSAYTPGTTVVTQNSQIIYREMVHNIDGKNFITTMPTVLGGPDNVANLAQASSMYQNVMVVDQFGNTSCMYTAPQQMMNKTCPTSIYNESGTSGVPSVQDKSVQSMPDPKTLIIEVGPLIGPAHDNICEQRSPRVLQPQPQQVVSTEVASIESPVETVDPKYEMPSGTKGLKILSNIKVEVPVQHNKNMVNTVMDLTGPNEADYPVERVASPEKILPDLEDNNPLSSDDTQPSSCQSTSSGDSMVSHTFSVIKNVGNPSKSSDSKLDTDFSDSCPVPDLICNEKPSISPCSELSENGDNSTDHTSISPKPESNQVSHSNLGLPEKKIQLSQKPYRHNTLRLNNIFVKKHKKVLQIKNVKAFPVSTARKSEQRDTIPTSSTCKSPENFTMNKMHQTDRTDCREKTNLLQTISVEEIKDNDEHNDFDADTSEQSMDIETLTANDLEEPEFVASLDNMIEVKEEINSSNEGAFSNEPVTTDRMLTPLESLRPINVINYGNLSSEDFNEESTDRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTADRVEAFDAEREAAVLKEGPKDGMYLWGEPSQKENEFVLPNFIHESYKIAESTGIDYSELGARPVPVDGCEPDSKADVLSERSESDAPINICADERMPPRGELSGQESNGDMESPWSGIYTDVTPPETYDLIAREPSWVSDASDVDSNEKRETIEDLQLPLAPVLPLPPTFARHRVHTCGSCGVTCTSLRELRAHKSLVHALPTCSASKTSYSRLVTQRAIKKEEKPDTKNLLPPIIDSKDVISSTMLEVYQSIQAQESKPKIEVDRLIKQEVRRRRKDYVCPTCKVDQGTDAQFHLHLKIHPLECLTCGKCFFRRANLSLHIKTHLGIKNYKCEVCEKRFVTRQKLSEHHNTHTGRAPVKCTVCDDTFRRYSNMVQHRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETYSIQARQGARLRVPVRPGVPLARQAALAPGDVLYTYMLLVSYTVTSMCRDRHHLQKRAKVRDFVCQCGLVFHSRAKLRWHQETHADRPRACLYCSDKFVHAASLTRHVRRSHNEYYLAERHKGKQQENVQCPVCKQVYLRSNLRTHLLTHSGQRPYMCIICNKSFTTKWNLKLHRWTHASRSAKPYKCGLCKGAFIRQSEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVAECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHVRIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-