Dmen034647.1
Basic Information
- Insect
- Diarsia mendica
- Gene Symbol
- -
- Assembly
- GCA_949316265.1
- Location
- OX438904.1:22466282-22474755[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.041 47 5.4 0.1 29 45 1560 1577 1557 1577 0.95 2 2 2.1e-17 2.3e-14 54.4 0.0 1 42 1584 1626 1584 1628 0.95
Sequence Information
- Coding Sequence
- ATGGAAGATCTTGTTATGTATCAATATGAACTATTAGAAAACTTAAAGGCTGCAGAAAAGAACTTTAAGAAGTCCCCAAAAGATCGGATTAGAAAACCATATTTGGAAACGAGGCTAGAATTGCTGGAAGAACTTTGGAAGAACTTTAAGGACGGACACAAAGGCATTATTTTGAGTATTACCAAggatgaagaaagaaaagatcCGTACTTTAAAGACAAGACATACGATGTATTCCAAGAATTGTATGTACTATACAAGTCAGCTATAAAGGAAGCTCTTCAGCCGTTTCTCGACTCAGCGGCTCAAGCTGCAATGCTTAGTGCTGCCGAAGGTCAGGTAAGGTCATCAGATAGTAACGAGATTCAATtaccaaaaattaaaatacctacctttAGCGGCAAATATGACGaatggcaaacattttatgaCTTGTTTTCTACCTTGATTCATAAAAATATGAGATTATCGCCAGTACAGAAGCTACATTATTTGAAAAGCAGCTTATCAGGAGAACCAGAAGTAATATTACGCAACTTTACTACAACAGATGCGAATTATGATGACGCCTGGGAACAATTAGTGAAGCGTTATAACAACAAGAGGTTTAATTGTAACGCAATCTTGAGAGTTCTTTTTACACAAAAGTCTGTACATACTGAGTCTGCGGGTTCAATTAAACACCTGGTAGATACAACTTCAACCTGTTTGAAATCGCTGAAAAACCTCGGTGCTGAGTCTGACAAATGGGACTTGATGATCAACTACTTAGTTGTGTCTAAGCTGGATCCAGAATCAATGAAACTGTGGGAACAACAACTTAGTACGAGCCATTGCGACGAACCTACTTGGCAAGATTTAAGAGATTTTCTGGAGTCAAGGTTTAGGTCATTGGAAATGATCGAAAGTAACAATATGAAATCATCGCAGCCGAAACCAGCAGTTAAACCTAAGGCATTTCATGCTAATGTCAACAAAGATGGGAAAGAACGCGAAAATAAGTGTGCAATTTGTGACAGCGAGCACTATATCTACCACTGCAAAACTTTCACCGATATGTCTACCAAGGAAAGACAGGAGTACGTCCAGAAGAATAGACTATGTTTCAACTGTCTTGCGCCATCACACTCAGTGAAGAAATGTCGTCAGTCAACGTGCTGCAAAAGGTGTGGAAGGCGACATCATTCCCTTCTCCACTTCGAGAGAGAGTCAACTACGGAGAAGTCAAAAGAAGAAGGAAACACAGCCACAGGTATCGTTAGTGAAGAGTCTCGAGGTAAGTCCACTCCTTCTTCAAGTGATGCTATTGTTTCTCATCATTGTAAACATATACAAACAAATTCTGTGTTATTAGCTACGGCTACTGTGTTAGTAAGTAGCAAGAACGGTTACGAACATATAATTAGGGCCTTGTTAGACCAGGGGTCGCAAGCGTCATTCATAACTGAGGCAACCGTTCAGCTACTTAATCTTAAACGTAAATCAGTGAGTGGTTGGGTGTCAGGTTTGGGAGAGGGGCAAACGAGAATCAAACACATGGTTTCACTCTGCGTGAAATCACGCCACAATCCCACAAAGTCAGTTCGAGTAAATGCTTATGTATTACATACGCTAACAACGCTGCTACCAACCATTAATCTTGAATTGCCTGATTGGTCTGAACTTGAGGAACTTGAGTTGGCTGATCCAGGGTTCACAACACCAGGTAGAATAGATATTCTACTTGGAGCTGAGGTATACGGTGACGTTCTGTTAGACGGCGTCATTAAACACCCCAAGGGAAACCTATTAGCTCAAAACACAGCCCTAGGGTGGGTGGTATCGGGAAAGATGTTAGAAACATCTACCTCAGCAAGGGGACACGTCACAACCCCACACGCTCAAGTTAGAGATGACGAGCTATTACGTCAATTTTGGGAGATAGAAAAGGAGCCAAATAGCATACGAAAGGTATTCTCAAAGGAAGAAGAAAGGTGCGAAGAGTACTATGAAGCCACAACAGTTAGAGATGAAGAAGGAAGATTTGTGGTAAGATTACCGTTTCAAACTGAAGATCCGAAATGTCAATATGGTGGGTCGAGGGAAATAGCAGCtaaaagatttaattttttaGAGAAAAGGTTGTCAAAGGATTCTAAGCTTCGGGAAGAATATCATAAAGTAATGGAGGAATATATAAACCTAAATCATATGGTGCAAGTTAATTCTTCTGAGATTGATAACCCAAACGCTGTCTATCTTCCTCACCACGCCGTAGTGCGAGAAGATAAAACTACCACAAAGCTTCGTGTAGTCTTTGACGCTTCGTGCAAGGGCTCAAATGACTATTCTTTAAATGACGACTTGTGTGTTGGTCCTCAGTTACAACAGGAATTACGTCATACATTAATGAGATGGAGAACACACAAATTCTGTATTACAGCTGACATCATTAAAATGTACAGAATGGTTCGTGTATCTGAAGAGGATACGGACTACCAGAGATTATTGTGGAGGTCTGCACCTCATGAGCCAATAAAGCACTTTAAACTTTTAAGGTTGACCTTCGGTACAGCATGTGCACCGTACCTTGCTCTTAAGTCACTTCAGACACTTGCCAACAAAGAGAAATCAAAGTATCCCATTGCTGCAAATATTACCGAAACTGATTACTATATGGATGATCTCCTCACAGGTTGTGAGACAGAGAAAGAAGCTGTCGATATTTATAACGAAATGAACAAGCTCATGAACTCAGGAGGATTTCAACTACAAAAATGGAGCAGCAATAGTGAGGCTTTGTTACACCACATTGGAGAAAACAAGCGAGATGATAATGAGCTGCCTCTTAAGATCAATAGTGTTGTTAAAGTATTAGGTTTGAGCTGGAATAGGGAAGCCGACACTTTTGAATATAGTGTCAATCTGCCAGAACCTAAGTTATCCATAACCAAACGTGCTATTCTGTCCGAAATAGCTAAGCTGTATGACCCTTTGGGATGGATAGCTCCAGTTGTGGTAATAGCAAAGATGATCATGCAGAAATTGTGGAAGACAGGTCTAAATTGGGATGAGACTATTAATGGTGCTTTACAAGCAGAATGGTTACGATTTCGAGAGAATTTAACGCACATCAAATGCCTAAGTATACCTCGATGGTTGCACTACACACGTGTATCAAGAGTGGAGCTGCATGTCTTCGCAGATGCATCACAAGCCGCATACGCAGCAGCAGTGTACATGCGAGTCATTAGTGAAGAGCGAGTTTACGTAAGCCTAATATCTTCCAAAACAAAAGTGGCTCCCATCGAGAAGCAAGTTTCCATCCCTAGATTAGAACTTTGTGGTGCTGCATTGGCAGCCAAATTAATGTCCGAGACGTCTCAAGTGCTAGGTGTACCTAAAGATAGCCTATTTGCGTGGACCGACTCCACCATTGTTTTGGCTTGGTTGAAAGGTGGACCAAGCCGATGGAGCACATTCGTGAGCAACAGAGTGTCAGACATACTAAACATCATAGATTACGAGCACTGGGGGCACGTATCTACTGATACGAACCCAGCTGACTGTGCGTCACGGGGCTTACAAGGTCCAGAGTTGTTGAACCATTCAGTATGGTGGAATGGACCGACCTGGTTGTCGagcttaaatataaatattagtgTTCCTAATATCGAAGATACACAAGAAGAAGAACGTGTGAGATCTTTGGCTactataagtaataataatgagGAATTTATTTGGACTAGGTATTCCAAGCAGAATACCAAGCAACTGATGGGGCAGCTGCCAGAAGTGCGAGTTAAACCCGACCGAGCTTTTAAATCAGCTGGGGTGGACTACGCAGGTCCCATCAACATTCGTTTCTCACCTGGTAGAGGAGCTAAATCGTACAAGGGTTACATATGTTTGTTTGTCTGCATGATAACGCGTGCCATACACCTGGAAGCTGTCACCGACTTGAGTGCTAAGGGATTCATCGCAGCCTTCCGACGATTCACATCAAGACGAGGCCATTGCAGCGATATTTATAGTGACAATGGCACTAACTTCGTGGGAGCAGACAAACAACTCAGAGACATGTTCAACAGTGCCAAATCTTCGTTTCCCGGTGAAGTAGCAGAGTTGTTAGTCCTAGAACGTACTACATGGCATTTTATACCTCCTCATGCACCCAATTTCGGGGGTTTGTGGGAGGCTGGAGTGCGCAGCACAAAAACTCATCTTAAAAAAGTAATTGGGGATTCTACTCTCACTTATGAGGAATTAGCCACCGTATTGGCACAAGTAGAAGCGTGTTTGAATTCCCGACCCATAACTGTACTAAGTGATGACCCTAATGACCCTCTTCCGCTAACACCGGGCCACTTTCTGATTGGCGAACCTTTGTTAAACTTAACTGACGAAAATTATACAAATAGTAATATTTCTAGTTTAGATAGATGGCGACTAACGCAAAAAATGGTCAACGATTTTTGGAACAGATGGTATAAAGAATACCTCGTTAATTTGAACCAAAGATATAAGTGGAACACCAAAACCACTGAGCCAGAAATCGATGACGTAGTGATTTTAAAGGAAGATAATATTCCTCCAAGTAAATGGATATTGGGTAAAATAATTGAGAAACATGTGGGCCCTGATGGCATTACTCGTGTGGTGTCAGTTAAATGTAAAAACCACATTTTTAAACGACCTACAAGAACGCTGTATGGTCGGTGTAAGCGAGAAGGTATCGAGCTGTCTCGCTCCAACCCCACGCCGTGGTCCGAAGACGCCATGGGTGAAGCACTGGAAGCAGTCAGGGTGGGGCAGATGTCCATCAACCAGGCTGCGATACACTACAACCTGCCGTATTCTTCTCTCTACGGGCGGTTCAAGAGGTGCAAGTATCAGATGCAGGGTATCCCTCAAAACCAGCAGCAACCACAGCAAGATCCTCACAAGATGGAGCAGGAGCAGCAACCGCACGAACTGCAGCAGTACTACCACCAGCAGCAACCACCTCCCCACCAAGAgccacacccacacacacacacatacacccaCATGCACGACTACACCCACAACCACGACCAGTACGGACAGGCACAGTACTACCAGGGTTTTAACAGTATTGCGACCAGCTGA
- Protein Sequence
- MEDLVMYQYELLENLKAAEKNFKKSPKDRIRKPYLETRLELLEELWKNFKDGHKGIILSITKDEERKDPYFKDKTYDVFQELYVLYKSAIKEALQPFLDSAAQAAMLSAAEGQVRSSDSNEIQLPKIKIPTFSGKYDEWQTFYDLFSTLIHKNMRLSPVQKLHYLKSSLSGEPEVILRNFTTTDANYDDAWEQLVKRYNNKRFNCNAILRVLFTQKSVHTESAGSIKHLVDTTSTCLKSLKNLGAESDKWDLMINYLVVSKLDPESMKLWEQQLSTSHCDEPTWQDLRDFLESRFRSLEMIESNNMKSSQPKPAVKPKAFHANVNKDGKERENKCAICDSEHYIYHCKTFTDMSTKERQEYVQKNRLCFNCLAPSHSVKKCRQSTCCKRCGRRHHSLLHFERESTTEKSKEEGNTATGIVSEESRGKSTPSSSDAIVSHHCKHIQTNSVLLATATVLVSSKNGYEHIIRALLDQGSQASFITEATVQLLNLKRKSVSGWVSGLGEGQTRIKHMVSLCVKSRHNPTKSVRVNAYVLHTLTTLLPTINLELPDWSELEELELADPGFTTPGRIDILLGAEVYGDVLLDGVIKHPKGNLLAQNTALGWVVSGKMLETSTSARGHVTTPHAQVRDDELLRQFWEIEKEPNSIRKVFSKEEERCEEYYEATTVRDEEGRFVVRLPFQTEDPKCQYGGSREIAAKRFNFLEKRLSKDSKLREEYHKVMEEYINLNHMVQVNSSEIDNPNAVYLPHHAVVREDKTTTKLRVVFDASCKGSNDYSLNDDLCVGPQLQQELRHTLMRWRTHKFCITADIIKMYRMVRVSEEDTDYQRLLWRSAPHEPIKHFKLLRLTFGTACAPYLALKSLQTLANKEKSKYPIAANITETDYYMDDLLTGCETEKEAVDIYNEMNKLMNSGGFQLQKWSSNSEALLHHIGENKRDDNELPLKINSVVKVLGLSWNREADTFEYSVNLPEPKLSITKRAILSEIAKLYDPLGWIAPVVVIAKMIMQKLWKTGLNWDETINGALQAEWLRFRENLTHIKCLSIPRWLHYTRVSRVELHVFADASQAAYAAAVYMRVISEERVYVSLISSKTKVAPIEKQVSIPRLELCGAALAAKLMSETSQVLGVPKDSLFAWTDSTIVLAWLKGGPSRWSTFVSNRVSDILNIIDYEHWGHVSTDTNPADCASRGLQGPELLNHSVWWNGPTWLSSLNINISVPNIEDTQEEERVRSLATISNNNEEFIWTRYSKQNTKQLMGQLPEVRVKPDRAFKSAGVDYAGPINIRFSPGRGAKSYKGYICLFVCMITRAIHLEAVTDLSAKGFIAAFRRFTSRRGHCSDIYSDNGTNFVGADKQLRDMFNSAKSSFPGEVAELLVLERTTWHFIPPHAPNFGGLWEAGVRSTKTHLKKVIGDSTLTYEELATVLAQVEACLNSRPITVLSDDPNDPLPLTPGHFLIGEPLLNLTDENYTNSNISSLDRWRLTQKMVNDFWNRWYKEYLVNLNQRYKWNTKTTEPEIDDVVILKEDNIPPSKWILGKIIEKHVGPDGITRVVSVKCKNHIFKRPTRTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQMQGIPQNQQQPQQDPHKMEQEQQPHELQQYYHQQQPPPHQEPHPHTHTYTHMHDYTHNHDQYGQAQYYQGFNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -