Basic Information

Insect: Diarsia mendica
Gene Symbol: -
Assembly: GCA_949316265.1
Location: OX438904.1:22456175-22464639[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.9e-11 3.2e-08 34.8 0.0 4 39 1952 1988 1949 1992 0.90

2 3 4.1e-10 4.6e-07 31.1 0.3 2 39 2004 2041 2003 2045 0.91

3 3 3.2e-07 0.00036 21.8 0.1 2 31 2059 2088 2058 2090 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.9e-11	3.2e-08	34.8	0.0	4	39	1952	1988	1949	1992	0.90
2	3	4.1e-10	4.6e-07	31.1	0.3	2	39	2004	2041	2003	2045	0.91
3	3	3.2e-07	0.00036	21.8	0.1	2	31	2059	2088	2058	2090	0.93

Sequence Information

Coding Sequence: ATGGTTTATAATACCCGATCTAAACATCAAAATAGTGAACCACCACAAGGAGCTTCAAACGGAGTCGCCACCCCTAGCGGAAATGACAATGGATGCACAGCCCACCCGTCGGAGGCCCACCAAGCGCCGCCCGTCAATATTAATAGCAGCGCGCCCCCGATAGCTGATGAACCAAACTCAAAGTCTGTATACTTTCCCCACCTATTAAAGGCCCACCAAGCACCGCATGTCCATGACGACAGCAGTGTGCCTTCAGGTAGCCGTGACTCCCctccacaacacacacacaacacacctaAGTCGGTCACCACACGATCGCTAGGGTCTACCCGATCCTCGAACactataaaagcaaaaaaactcgCCGCTGAAGCATTACATGCACGTCAGCTCTGTGAAATCACAGCCCGACAAACCAAACGGCTCTGTGACATCACAGCCCAACAAACCGAACTCGAACGTAAAGCGGCTGACCTACACCTTGAGGCCGAACTGGCCGCTATCGACGTAGAAAGCGTAAGAGGCAGTTTAAGAGACAATGATCATGGTAGCCATTGCACTAGTGCGAAAGCAGACAACATCAATCGATGGCTTAACGATGTACAACCAAACATCATCCCAGGAGGTAAAATACCTCTCGCTGCAACAGTACACACAACGGCATACAACGAAATGCTCAATGTTCCTTCTGGTTCAGGCCCAGGTCGAAATGTACACTCAGCAATATTGAATTCTACACACCGTCAGACCTACGCGCCTAACCAAAATCCAAGTAACGTTTTCTCAACTAAAATCCATAATAATTTACAGCCACCCGATGGAGCTGCCGTCAGCTGCGGACATAACGATCATATCTGCATTTTTAATGCACTATCTAATAAACTCAAGAAGTCGGACATCAAACTGCCAGTGTTTGACGGAAAATCTGCTACGGATTGGCTTGGTTTCAAGCGTATTTTTATCGATACACAGGCATCATTTACTACAGTAGAAAACTTAGCCCGCATCAGTTCATCCTTACGTGGCGCCGCTCGTGAAGCCGTTTACATTCTACTGGTATCTGCGAACGACCCTATGGAGGTCATAGACGCCCTCGAGTTGCGTTTTGGTCGTCCAGAAAAAATTGTGATGCAGGAAATCAACGCTGTGCGTGCTTTATCTAAAGTTGGCGCAGAAGGTAAAgatttagttaattttacttgTCGTGTCAAAAACTGCATTGGCATAATAAAACTATTGGATCAGTTTGACTATCTGCATTCTTCCGAAATTTTCAATTCATTAATGACCAAACTATCCCCAATCACTCGCGTAAAGTGGTACGAGTTTGCGGCTAGTCATACTGGCGAACGCATGAGCAAGTTGGAGATGCTTTCTGATTTCCTATCTCGTGAGAGTGAACTTCAAACTAAGTTTGGAATTCAAGATTTCTATTCCTCGATGGCTTCAGTTCAACTACCTATCGAAAGGGGCACGCATTTTGATCAAAGCCTACCCGACGAAAAACCTTCCAATtctgttataaataaaactggaaataaatgtattttttgttcgaAATTGCATAACGTCAACAAATGTGACAAATTTTTGGCATTGTCAGTGAATGAAAGATGgcaatttataaaaaagaatAAAGTATGTCATAGATGTTTGGAAAATAGGTCGCATAGGTTTAACCTTTGTAAAGTAAAATCTCCATGCAGTGTTGGGGGCTGTACTTACAAACATCATAGCCTACTACATAACTTAGATAATGATCAGAATGTGCTAGCTCACGCCGATCTAGAGGACACCTCAGACTCTGAACTTGAGGCAGCGCCAAAGCCATCTACTGATATCGAAGAAGGGAAATCTGAACCAGACAACTGTGATATCGAAGTATCGGCTCATGTTACGGCTATTCGCCCTTCGTCGAGCGTAAGTAGACCTAAATCTCGACCACTTCTTAAAGTTGTCGCAGTTCAAGTAACTGGTCCCCGGGGGACTGTGGAGACTCACGCACTTTTAGATGATGGCTGTACAACTACTTTCATAGACTCTGAGATTACAAAGCATGTAGGTATCGAAGGCCCGAGTAAACGAGTACGAATAGATTGTGTAGGAGGCTTGTCACGTGATTGCGATATTCAGTACGTTGATTTTACAATTAAAGGGCGTAACTGTACCGACTCTTACCAGATACATAATGCTCGCTCGGTCAAAAATTTAGGTATAAATTATCGAGCTTCTGTAAATAGGGAAGATATTAGTGAATATTCGTATTTATCTGATTTAGGAGATATTTTATGTTGTGATGAAGTACAACCTATGCTAATTATTGGTGTAGATAACTGGAAGTTGACCGTGGCAGATTCTATTCGTGCAGGCAAGGACCACCAACCAGTTGCAATCCACACTGCTCTTGGTTGGGTTTTATATGGCTTCGTGTCAAGTAGAACATCCAAGGTTAACTTTCTTCATCATGCCAACATATCCGAAACGCCAGACAGTAATTTTTCTATTGAAACCGCAATCAAAGACTACTACAAATTAGACGCTATTGGCATAATAAAGAAAGACCACCGCGGCATTTCTGATCAACACGCATTAAAAACTTTGCACGAGACTGTACATAGACTATCTGATGGTCATTTTGAAGCCGGTCTTCTCTGGCGACCCGATATTGAAGATGTACCGAACAATTTTAAATTAGCCCTTTCTAGATTTTTATCTCTCGAAAAGAAAATGCAGTCAGATGTGCAATATGCCAACATGTATAGGCAAAACATTAAAGCAATTTTAGATAAGAAATACGCTGAAGAATGCATGGCCCCCCCAATTGGTATCACTTGGTATCTCCCACATTTTGGCGTTACTCATGCCCATAAACCTGGTAAGTTGAGAGTCGTACACGACGCAGCCGCGAAGTTTAAAGGAATCAGTCTTAATTCTCTCCTCTTGCCAGGTCCTGACTTATTACAGCCATTACTTGCGATCTTGATGAGGTTTAGGGAAAACGCTATAGCACTTACGGCGGACATACGCGAAATGTTCCCACAGGTTCGAATCCGTCCAGCAGATCGCGATGCGCAGCGCTTTCTGTGGCGCGATGACCCCGCACACAAATTAAAGCTGTATCGTATGTCATCAATGATGTTTGGTGCGTGCTCGAGTCCGTGTACCGCCCTATATATAAAGAACCTTAATGCGAAAGAATGCAAACTTGAGTACCCTGATGCTGCGCATGCAACTATACATGATGTATACATGGACGACTATATTGGCTCACTACAGAGTGTAGACCAAGCTGCGCGCCTGGCCCGTGACATTGTACATCTCAACCGTCAGGCGGGTTTTGAGATGCGCGACTGGGTCTCGAACGACCCAAGAGCTCTTTCTTTATTAGTACCTGAATCGATATCTCAGAAATTTAACGATGTAGTGCTAGGTAACGATGACAACGTTTCTAGGGTGCTCGGTCTGAATTGGCAACCTAGGAACGACGTCATAGGTTTCAGTCTCAACTTGGATTCTAAACCGCCAGCTAGGCTAAGTAAACGTGATGCGTTGTCCACCTTAATGCGAATTTATGATCCCTTGGGTATTCTAGGCCCACTTGTTTCTAGAGGACGCATCATGTTCCAGTCAATTTGGCGAAAAGGTCTAACTTGGGACGATGAACTTGATCAAGGAGATCAAAAATTTTGGATTGAATGGCTTCGAGATGTACAACTTGCTTCTCAATTGCACCTGCCGCGATATTATGGTCTTAGATCATCATCTAATATCATTCACCGCGAACTTCATCTGTTTTGCGATGCCAGTGAGTTAGCGTACACTGCAGTGGCGTACTGGCGATATATCTATGCAGATGGAACAGTGAAGCTCGCTCTTATCGGTAGCAAAAGTAGAGTCACACCATTGAAACCCGCCTCCATCCCACGCCTCGAGTTGCAGGCAGCTTTAGTAGCCGCTCGGTTTGCATCATTCATTCATGAATCGCATCAGCATAAACCAAGTAAGCGTATATTTTGGTGCGATTCGCTTAACGTTTTGAGTTGGTTGCGTAGCGATGCGCGATCATTCAAACCATTTGTAGCACATCGAATCGGCGAGATTCTCGAAACTACAGCTGTAACGGAATGGAGATGGATTCCGACCGCGGAAAATGTGGCAGACGATGCGACACGCCATAAGCGCGCAGTATTCAATCAAGAATCTCGCTGGATTACAGGTCCAACATTTTTACTCGAATCAGAACAACAATGGCCAACATCACCATACATAGACACGACCagtagtttagaaaaaaaaccatCCGGTATGAATCATTGTCATCTCATTTCCTCTCATAATTTCCCGACACCATTGACTGTTGACCCAGAAAGACTGAGCTCATGGGGAAGGCTATTGAGAGCTACGGCGAGAGCCCATAAATTTTTGCacctattaaaaaacaaaggcaGTCCTAAAGAAATAACCGCCGAAGATCTGCGCGTGGCTGAATCACATATTCTGAAGAAAAGCCAACTCGACTCCTTCCCAGATGAAATCGTCTACCTCTCTGAGAAAAGGCCATTACATCGAAAAAGTCGATTATTCAATCTATCCCCCTACATAGATAAAGATAATTTACTGAGATTGGGCGGAAGAATCAACCGAATGCAAGATATTGGCGATGGCGTGAAAAATCCTATAATTTTAGATCCCAAACACCCTGCTGTCCAGCTTTTGATTGCCCATCATCACGTGAAGTCTGCCCATGCTAATTCCGAGACAGTAGTTAACGAAATGCGGCAAACCTATTGGATAATCAATTTGCGAAGTGCTGTTCGAAAAGTCGCCCATGGTTGTCAACTGTGCCGGCTGAAGCGCGCTCAACCCTTCGCACCGTCCACCGGAGACCTCCCACCAGCCCGCCTAGCGCATCATCGTAGACCGTTCACTTTCGTTGGCTTGGACTACTTCGGCCCAGTTCAGGTCACAGTTGGGAGAAGGAAAGAGAAACGCTATGTAGCACTGTATACCTGCCTTGTTATACGAGCAGTTCATCTGGAGGTTGTACATAGTTTGTCAACCGACGCGGCGATCATGAGTTTGCGCCGTTTCATTGCGCGCCGTGGAACGCCGAGTGAGATATGGTCCGATAACGGAACAGCTTTTGTGGGAGCCAACAGAACGCTAAGAGAGCTGTACGGAGCGGAAATTAACCGATTTGTAGCAGATGAGAAGATCTCATGGCGATTCATTCCCCCTTCAGCCCCATTCATGGGTGGAGCGTGGGAGCGGATGGTAAGATCAATCAAAACAGCACTCAAGACCACCCTAAGAGAACGCTCCCCCTCAGATGAAGTTCTGCAGACCTTTCTACTAGAGTCAGAGAATTTAGTGAATACACGTCCTCTGACACACGTTCCAGTTGATCCAGACTGTGAGGAAGCCTTGACACCAATGCATTTTATACTAGGATCGTCTTCAGGGAAACCTATCCCAGCTACGTTGACAGATCGGGATATCATCGGACGAGACGGTTGGCGCAGAGCCGTAAGACTCACGGATCATTTCTGGTCTCGATGGATTCGGGAATATCTTCCGACTTTGGTACCTCGACGCGGCGGTGGATCATCCCCAAATATAAAGGAGGGTGACTTGGTTATTGTGGCAGATGGACAGTTACCCAGAGGAACTTGGCCGAGAGGTAGAGTGACTAAGATATACACAGGCCCAGACGGAGTAGCAAGAGTGGCGGACATACTAACAGGTGCTGGCCCTCTCAGGAGACCGCTTAAGAACGGTGAAGACACAAGCGACTCCTGCGGCCGGCAAGCGTCGCCCGCGCTGCGACACAGCCCCAAAAGCTGGACCCAGCACGATATGGAGCGGGCTTTGGACGCTCTCAGAAACCATCAGATGAGCCTTACGAAGGCATCAGCAACGTACGGCATTCCGTCCACCACGCTGTGGCAGCGCGCACACCGGCTCGGTATCGACACACCCAAGAAAGAGGGCGCTGCCAAGTCGTGGAGTGAGGCAGACCTGCGTGGAGCTCTGCATGCGCTAAGGGCTGGAGCCATCTCCGCTAACAAAGCCAGCAAGGCTTATGGCATTCCCAGCAGCACTCTATACAAGATAGCTCGAAGAGAGGGCATCCGACTATCGGCGCCATTCAACGCAGCGCCTACCGCCTGGCGCCGCGCAGACCTACAGCTGGCGCTCGCGTCCATCCGCTGCGGCGCCAGCTCGGTGCAGCGTGCCGCCACGCAGTATGGGATACCTACAGGTAGTACTACAGTCTGCAGCTGGCGCTCGCGTCCATCCGCTGCGGCGCCAGCTCGGTGCAGCGTGCCGCCACGCAGTATGGGATACCTACAGGTAGTACTACAGTCTGCAGCTGGCGCTCGCGTCCATCCGCTGCGGCGCCAGCTCGGTGCAGCTTGCCGCCACGCAGTATGGGATACCTACAGGTAG
Protein Sequence: MVYNTRSKHQNSEPPQGASNGVATPSGNDNGCTAHPSEAHQAPPVNINSSAPPIADEPNSKSVYFPHLLKAHQAPHVHDDSSVPSGSRDSPPQHTHNTPKSVTTRSLGSTRSSNTIKAKKLAAEALHARQLCEITARQTKRLCDITAQQTELERKAADLHLEAELAAIDVESVRGSLRDNDHGSHCTSAKADNINRWLNDVQPNIIPGGKIPLAATVHTTAYNEMLNVPSGSGPGRNVHSAILNSTHRQTYAPNQNPSNVFSTKIHNNLQPPDGAAVSCGHNDHICIFNALSNKLKKSDIKLPVFDGKSATDWLGFKRIFIDTQASFTTVENLARISSSLRGAAREAVYILLVSANDPMEVIDALELRFGRPEKIVMQEINAVRALSKVGAEGKDLVNFTCRVKNCIGIIKLLDQFDYLHSSEIFNSLMTKLSPITRVKWYEFAASHTGERMSKLEMLSDFLSRESELQTKFGIQDFYSSMASVQLPIERGTHFDQSLPDEKPSNSVINKTGNKCIFCSKLHNVNKCDKFLALSVNERWQFIKKNKVCHRCLENRSHRFNLCKVKSPCSVGGCTYKHHSLLHNLDNDQNVLAHADLEDTSDSELEAAPKPSTDIEEGKSEPDNCDIEVSAHVTAIRPSSSVSRPKSRPLLKVVAVQVTGPRGTVETHALLDDGCTTTFIDSEITKHVGIEGPSKRVRIDCVGGLSRDCDIQYVDFTIKGRNCTDSYQIHNARSVKNLGINYRASVNREDISEYSYLSDLGDILCCDEVQPMLIIGVDNWKLTVADSIRAGKDHQPVAIHTALGWVLYGFVSSRTSKVNFLHHANISETPDSNFSIETAIKDYYKLDAIGIIKKDHRGISDQHALKTLHETVHRLSDGHFEAGLLWRPDIEDVPNNFKLALSRFLSLEKKMQSDVQYANMYRQNIKAILDKKYAEECMAPPIGITWYLPHFGVTHAHKPGKLRVVHDAAAKFKGISLNSLLLPGPDLLQPLLAILMRFRENAIALTADIREMFPQVRIRPADRDAQRFLWRDDPAHKLKLYRMSSMMFGACSSPCTALYIKNLNAKECKLEYPDAAHATIHDVYMDDYIGSLQSVDQAARLARDIVHLNRQAGFEMRDWVSNDPRALSLLVPESISQKFNDVVLGNDDNVSRVLGLNWQPRNDVIGFSLNLDSKPPARLSKRDALSTLMRIYDPLGILGPLVSRGRIMFQSIWRKGLTWDDELDQGDQKFWIEWLRDVQLASQLHLPRYYGLRSSSNIIHRELHLFCDASELAYTAVAYWRYIYADGTVKLALIGSKSRVTPLKPASIPRLELQAALVAARFASFIHESHQHKPSKRIFWCDSLNVLSWLRSDARSFKPFVAHRIGEILETTAVTEWRWIPTAENVADDATRHKRAVFNQESRWITGPTFLLESEQQWPTSPYIDTTSSLEKKPSGMNHCHLISSHNFPTPLTVDPERLSSWGRLLRATARAHKFLHLLKNKGSPKEITAEDLRVAESHILKKSQLDSFPDEIVYLSEKRPLHRKSRLFNLSPYIDKDNLLRLGGRINRMQDIGDGVKNPIILDPKHPAVQLLIAHHHVKSAHANSETVVNEMRQTYWIINLRSAVRKVAHGCQLCRLKRAQPFAPSTGDLPPARLAHHRRPFTFVGLDYFGPVQVTVGRRKEKRYVALYTCLVIRAVHLEVVHSLSTDAAIMSLRRFIARRGTPSEIWSDNGTAFVGANRTLRELYGAEINRFVADEKISWRFIPPSAPFMGGAWERMVRSIKTALKTTLRERSPSDEVLQTFLLESENLVNTRPLTHVPVDPDCEEALTPMHFILGSSSGKPIPATLTDRDIIGRDGWRRAVRLTDHFWSRWIREYLPTLVPRRGGGSSPNIKEGDLVIVADGQLPRGTWPRGRVTKIYTGPDGVARVADILTGAGPLRRPLKNGEDTSDSCGRQASPALRHSPKSWTQHDMERALDALRNHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQLALASIRCGASSVQRAATQYGIPTGSTTVCSWRSRPSAAAPARCSVPPRSMGYLQVVLQSAAGARVHPLRRQLGAACRHAVWDTYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -