Basic Information

Insect: Diarsia dahlii
Gene Symbol: -
Assembly: GCA_949775195.1
Location: OX459191.1:5110283-5121391[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0002 0.026 16.4 0.4 1 23 200 222 200 222 0.98

2 29 0.0007 0.089 14.7 0.8 2 20 251 269 250 271 0.92

3 29 6.1e-05 0.0077 18.0 0.1 2 23 302 324 301 324 0.96

4 29 0.00053 0.067 15.1 0.7 2 23 373 395 372 395 0.95

5 29 0.018 2.3 10.2 0.8 1 23 414 436 414 436 0.95

6 29 0.00011 0.014 17.2 3.3 1 23 476 499 476 499 0.95

7 29 0.0019 0.25 13.3 4.1 2 23 539 561 539 561 0.97

8 29 0.0025 0.31 12.9 0.6 1 23 611 634 611 634 0.97

9 29 0.0045 0.57 12.1 0.2 1 23 686 708 686 708 0.97

10 29 0.00012 0.015 17.1 3.5 1 23 719 741 719 741 0.98

11 29 0.028 3.5 9.7 1.6 2 23 753 774 752 774 0.96

12 29 0.0033 0.42 12.6 1.4 1 23 784 806 784 806 0.98

13 29 0.013 1.6 10.7 7.6 1 23 835 857 835 857 0.96

14 29 0.0013 0.17 13.8 3.4 1 23 868 890 868 890 0.98

15 29 4.6e-05 0.0058 18.4 2.1 1 23 898 920 898 920 0.98

16 29 0.00034 0.043 15.7 0.3 2 23 940 962 939 962 0.97

17 29 3.3 4.1e+02 3.1 0.3 1 23 980 1002 980 1002 0.89

18 29 5.6 7.1e+02 2.4 0.8 1 9 1009 1017 1009 1023 0.93

19 29 0.0027 0.34 12.8 2.8 2 23 1042 1064 1041 1064 0.95

20 29 0.017 2.1 10.4 0.2 2 23 1087 1108 1086 1108 0.95

21 29 1.5 1.9e+02 4.2 3.6 2 23 1151 1173 1150 1173 0.95

22 29 0.028 3.5 9.6 0.1 2 23 1189 1210 1188 1210 0.94

23 29 0.59 75 5.5 4.9 3 23 1218 1238 1216 1238 0.96

24 29 0.016 2 10.4 0.8 2 23 1249 1271 1248 1271 0.95

25 29 2.4 3e+02 3.6 6.7 2 23 1288 1306 1288 1306 0.90

26 29 0.35 45 6.2 1.9 2 21 1310 1329 1309 1330 0.94

27 29 0.2 26 6.9 0.5 2 23 1379 1400 1378 1400 0.93

28 29 0.0072 0.91 11.5 0.4 2 23 1411 1433 1410 1433 0.96

29 29 1.2 1.5e+02 4.5 1.2 2 20 1471 1489 1470 1491 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0002	0.026	16.4	0.4	1	23	200	222	200	222	0.98
2	29	0.0007	0.089	14.7	0.8	2	20	251	269	250	271	0.92
3	29	6.1e-05	0.0077	18.0	0.1	2	23	302	324	301	324	0.96
4	29	0.00053	0.067	15.1	0.7	2	23	373	395	372	395	0.95
5	29	0.018	2.3	10.2	0.8	1	23	414	436	414	436	0.95
6	29	0.00011	0.014	17.2	3.3	1	23	476	499	476	499	0.95
7	29	0.0019	0.25	13.3	4.1	2	23	539	561	539	561	0.97
8	29	0.0025	0.31	12.9	0.6	1	23	611	634	611	634	0.97
9	29	0.0045	0.57	12.1	0.2	1	23	686	708	686	708	0.97
10	29	0.00012	0.015	17.1	3.5	1	23	719	741	719	741	0.98
11	29	0.028	3.5	9.7	1.6	2	23	753	774	752	774	0.96
12	29	0.0033	0.42	12.6	1.4	1	23	784	806	784	806	0.98
13	29	0.013	1.6	10.7	7.6	1	23	835	857	835	857	0.96
14	29	0.0013	0.17	13.8	3.4	1	23	868	890	868	890	0.98
15	29	4.6e-05	0.0058	18.4	2.1	1	23	898	920	898	920	0.98
16	29	0.00034	0.043	15.7	0.3	2	23	940	962	939	962	0.97
17	29	3.3	4.1e+02	3.1	0.3	1	23	980	1002	980	1002	0.89
18	29	5.6	7.1e+02	2.4	0.8	1	9	1009	1017	1009	1023	0.93
19	29	0.0027	0.34	12.8	2.8	2	23	1042	1064	1041	1064	0.95
20	29	0.017	2.1	10.4	0.2	2	23	1087	1108	1086	1108	0.95
21	29	1.5	1.9e+02	4.2	3.6	2	23	1151	1173	1150	1173	0.95
22	29	0.028	3.5	9.6	0.1	2	23	1189	1210	1188	1210	0.94
23	29	0.59	75	5.5	4.9	3	23	1218	1238	1216	1238	0.96
24	29	0.016	2	10.4	0.8	2	23	1249	1271	1248	1271	0.95
25	29	2.4	3e+02	3.6	6.7	2	23	1288	1306	1288	1306	0.90
26	29	0.35	45	6.2	1.9	2	21	1310	1329	1309	1330	0.94
27	29	0.2	26	6.9	0.5	2	23	1379	1400	1378	1400	0.93
28	29	0.0072	0.91	11.5	0.4	2	23	1411	1433	1410	1433	0.96
29	29	1.2	1.5e+02	4.5	1.2	2	20	1471	1489	1470	1491	0.93

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTTGGAAAATGCAGGCTCTGCCTCAAGCTCGGCGACTTTTACTCCATCTTCACGGTCGACAATGCTTTACAGCTGGCGGAGATGGCAATGGAATGCGCCCGGGTGAAAATATACGAGGGCGACGGGCTGCCTGACAAGGTGTGCTCAGAGTGCATACAGAAGCTCAGCGGTGCGCACATCTTTAAACAGCAGTGCGAGCGAGCCGACCAGGAGCTCCGCCGCAACTATGTGCCTCCACCCGGATTCAGCATTAGCGCGCCCGACAGACAGAGCAGCGATTCCGCCTTTTCTAATCACACTGATTCCTCAAATTTGAACAAACCTCCGTCTTCCATCGAGGAGAAAGTAACCCCTGCCGCCAGAACCCGGAAACGTAGCGCGGACAGCGTCGACAACGCATCCACTGGCGGTGCCTCCAGCGACTACCGGCCCAGCGGCTCCAAGCGAGTCGAGGAACTCCGACGCACCATCAAGAGACCCAGAAGATTGTCAGGACATGTCTCGCATTTAGATTCTGATTACGAAGATAACAGCCCATCATACCTAGCTGATACAGATTCTGACGAGCCCTTACTTAAAAATAGCTTCAATTGTGATGAATGCCCCAAACAATTCGTATCTCAACGAAGTCTCGGTGTCCACAAGAGGGTACACGACAAAAAAGAAAGTCTTGGCGAAAATACGGTCGTAAATATCCCACAGAGAACAGAGGACGCCGCTGACGTGGAGGACAAACTGAACTGCGACAAATGTGGCAAGACATTCAAGTTAAAGATCATGTTGAAACGCCACCACGAAATATGCGGAAAGATTACAAATCCTATCATTTCTCCAAAGAAAGAGTTGCTCATCGCTCTAGAACCGATCGACGGCATGAAGAACCGGAACATTGTGTGCGAAATGTGCAACGCCAAGTTCAAGACTATCGACAATTTGGCAAAGCATATGAAGGTAGTCCATGCGGCTGTCTTGAAAAGagaagataaaaaacaaaacggaAAGGTGTCAGTTCCTTGCTTGTTCTGTAAGAAGCTGTTTGACGAGTACTATAGTCACAATGCGCATTTTCACAAGTGTGCCAAAAGGGACGACTCTTTACCACTTCAGTGTCCTATTTGTAAGAAGGTAGTGATGAGAAAGAGTAATTATTTCCTACATCTTAAGAACATGCATTTAGAGCCTCGGATGTCACCGAACACTTCGGTGGAGCCGGCGGCGCATGAGTACCACGAGTGTAAGATGTGCTTCATGAAGCTTCCGACGCAAGATTCGCTGATCAAGCATCTGGCGGAGCACGTGTCAAGTATAGAGAACAATGACGGTAGAGCTGGCAACGTATCTAGAGCAAGCACTATGGACGACTCTGCATCCATCCATTCAGTACATAGCCAATCGCACACTCCCACCACTCTATATAAATGTCCAACATGTGACAAAGAGTTCAAATACAAGAAAGCTCTTCAAACTCATGAGGCTAGGTGTCATTCAGAAGTACCTGTGGTAGTGAAAGTAGAGCCACCTGATAAAGCATCGACAAGTCTTCTAAGCGAGACGGTTTATAGGCAGACTGAGTCAGAATCTAGTCAAGACGAGGACGACAATACTTGTGACATCTGTGAGAAACAGTTCTCGTATCGTCGGCTCCTCCTCCACCACAAGAGAACCAAGCACAACATGAGCTCGGGACACAAGCGCGCCAAAATCTACCTCAAAGACTGCTCCGTGCGCTGCCTCATCTGCGACCTCGACATGAAGGTTGGAGCGATAAACGAGCACAACAAAACACATATAGCAAACAATATGAAGCCGAGGAACATTTACACCTGCGCAGAATGCGAGGACACTTTCAAGAGCTGTTCTGCTCTCGCAAACCATATAAAGCTAATTCACCGACTAAAGCAGAAGCGGATCGAAGAATCCGTGAACCCGTCGGATTTTTGTGAAGTCGTTGTGGCAAAGGCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGCGAGGTTCCGGGCGAGAGCAAGCCGCTGGTAGACCTGAGCGGCTTCACCTGCCCCATCTGCAGCAAGAAGATGCCAACTCTCATCTCTTTGAAGAGGCACGTCAACTGGCACTCCAATGTAGGCAATAGTATTGAGAAGAAGTACGAGTGTGTCGTCTGTAACGAGTCTTTCAGGTTCCAGCGCCACTACAAGATACACATGCGCCAGCACTACCACGACACCAACCTGGACCCCAAGCACCTCACGTGCACCATCTGCGGACGACGCAGCAAGCACCTCCGCGCCGCGCAGATGCACATGAACTACCACAAGCAGACGCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCGAGCGCGTCTTCCAACACCGCAAGGTTTACCTCTCGCACATGGCCATACACTACAAGAAAGGCGACAGCGTCCAAAACACCATTGTAGGCGACATCATGCCCAGCACCGTCGACAAAACTGTCTTCGACGGCACACACACCTGCCACCATTGCGGCAAAGTGTGCGATTCAGAGGTCTCCCTCAAACATCATGTCATCTGGCACAGTTCCAAGACTTTCCTGTACGGCGCTCGCCACGAGTGCACCATCTGCAAAGTAAAGTTTACTAATAAAAGAAGACTAGAAATTCACACCCGATCCCACTACGAGGATGACAACGGTCCCTACAAGTGCACCATTTGTGGCAAAGGGTACACCCACGAGGGCTACTTCCAAAAACACGTGAAGGGACACAACTTCGATCATCAGTCACATAAAAAGAGGATAGATAAAATCAGAAAGGATAAAGTAAAATGTCCGATATGTACGCGGTTCTACCCGGACCTGGTGAAGTTGATCCGCCATCTGCGACGCACGCATCCCGAGAGTAAGATGATCAAGTCCGACCCCGACGCTCCGCCGCCGCTCTACTACTCCTGCAAGTTGTGCGCCAAGATATTTTTAGACGAGCGAAGACTGCAATCTCACGAGGAAGCACATTTGAGAAAGCCTGAGTTCTTTAAATGCAAGTTCTGTGGAAAGAAACACATCTCGCTAAAGAGCCACGGCATTCACGTTAAGGGTCATTTGGCGCAAAAGCATTACGACAACCCGCTGAAGTGTCCGCACTGCGACGAGACGTTTGTGAAGGGTTACGGGCTGCACCACCACCTGCGCGACGCACACGGCATCAACGAGAACTGGATCGCCGAGCGCTCGGAGCTGCCGCTGTCCGGCCCGCTCAAGGACCTGCAGTGCTCCATCTGCATGAAGGTGCTCGCCAGCAAGGGCAACTACGAGCGGCACATCGATTACCACAACTCCTTGAGATGTAACTACTGCTTCGATTACTTCAGCTCGCTCAGGTTTTTAGAAGGACATCTGGCGTTCTCGTGCGAAAAGAAAAAGCTGTTAGGCGATACTGAGGTTTACCCTAAGAAAGTGAAATGCAATATTTGTTACAAAGCATTCCATGTTCAAGTGAAACTAGACTGCCATCTGCGCACGCAGCACGGCATCATCGTAGACAAGGAACGTTCAGCAGGCAAGCAAGAAATTGTCTGTGACTATTGCTTCCGAGTTTTCGAGAACGAGTATGCTCTAGGTACTCATAAGATTTACCATCGCACGATCGGCTACTACGGGTGTATGTACTGCAAAAAGAAGTTTAACACATTGACTGTGTATCGAAAACATAAGAATCACCATATGGCACAGCTCAATGTAGATAACCCGACGAAATGCGAACATTGTGACGAAACGTTCGTCGCTTTCAGGGAAATGATATACCACATGAGAGACGTGCACGGAGATGATAAGGAATGGTTCACCGAGCCTAAGGAATCTATAGAGGAGACCTGCCATATCTGTAACAAGCGGTTCTACAACCTTCACAAACATCTCACTTACCATGAACAAAACAAGTGCAAGAAATGCAACGAGTATTTCTACTCCAGGGCAGACTTCGATAGTCATCTTTGCGCCATTGAAAGCGATGACGAAGGCACGGCATACGTGGGCAACGATAACGCGTTCCAGTATGAGGAGTGCAGGTTCTGCTTCAAACCTATCACCAAGAAAAGCACGAAACGGCTTCACGACCAGATACACAAGGGCTCCGGCGCTATATCCTGTAGATTTTGCCCACTTAAGTTTAAAACTATGGACGCTTTTAACATACACGCTTTCTCGCATCGAAGCAGAAAATACAACAAGAAGCCGATAAAATGCAGGATATGCCGCGAGAAGTTCGTTAGATACGGACCATTTATAAAGCATATGAAGTTAGTCCATAAATCGCCGAAGAAGGTTCACTATCGAGCGGTCGTGAAGCCGGACAAATGTGTCGTTTGTGGGGATGACTTCCCGAATCTCCACAATCATTACCGCGCCCACCTGCTGAACCAGTGTCAGGGCTGTTTGAAATACTTCACCTCTTACAAGGCGATAACTAAGCATGAGTGCGCCAAAGAGGACGCGGACCCGTCGAAGGTGTTCACAAGCGACGCTAATTTGACCCAGCTGATAAATACATATGTTCCTCAAGACGAGAAGGATGATGAAAAGTATTATGGCTACACTGacaatgaagaagaagaagacgacATTGAGCCGCAAGTGCTTGGCGAAGACGAGGAGAGTCAGGAGAGTAAAGATATACCAATGCTCCCGTCACCGATCATATCGGATGTCCTGTCGCTGTTCAAGGCAGAGATGAATGGGCTAGACGAGATGGAAGGCGAGGTGAATGGTGTGGTGGATAACATGGCTGAGGTTGTCGACTTATCTGATGATGACTCTGTGGGTGTTGATGAATCTGTAATGCCAGAAGTTGTTGTTATAGATGACGATTAG
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMAMECARVKIYEGDGLPDKVCSECIQKLSGAHIFKQQCERADQELRRNYVPPPGFSISAPDRQSSDSAFSNHTDSSNLNKPPSSIEEKVTPAARTRKRSADSVDNASTGGASSDYRPSGSKRVEELRRTIKRPRRLSGHVSHLDSDYEDNSPSYLADTDSDEPLLKNSFNCDECPKQFVSQRSLGVHKRVHDKKESLGENTVVNIPQRTEDAADVEDKLNCDKCGKTFKLKIMLKRHHEICGKITNPIISPKKELLIALEPIDGMKNRNIVCEMCNAKFKTIDNLAKHMKVVHAAVLKREDKKQNGKVSVPCLFCKKLFDEYYSHNAHFHKCAKRDDSLPLQCPICKKVVMRKSNYFLHLKNMHLEPRMSPNTSVEPAAHEYHECKMCFMKLPTQDSLIKHLAEHVSSIENNDGRAGNVSRASTMDDSASIHSVHSQSHTPTTLYKCPTCDKEFKYKKALQTHEARCHSEVPVVVKVEPPDKASTSLLSETVYRQTESESSQDEDDNTCDICEKQFSYRRLLLHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLDMKVGAINEHNKTHIANNMKPRNIYTCAECEDTFKSCSALANHIKLIHRLKQKRIEESVNPSDFCEVVVAKAEPLDWIQSHNDFGEVPGESKPLVDLSGFTCPICSKKMPTLISLKRHVNWHSNVGNSIEKKYECVVCNESFRFQRHYKIHMRQHYHDTNLDPKHLTCTICGRRSKHLRAAQMHMNYHKQTRFQNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGDIMPSTVDKTVFDGTHTCHHCGKVCDSEVSLKHHVIWHSSKTFLYGARHECTICKVKFTNKRRLEIHTRSHYEDDNGPYKCTICGKGYTHEGYFQKHVKGHNFDHQSHKKRIDKIRKDKVKCPICTRFYPDLVKLIRHLRRTHPESKMIKSDPDAPPPLYYSCKLCAKIFLDERRLQSHEEAHLRKPEFFKCKFCGKKHISLKSHGIHVKGHLAQKHYDNPLKCPHCDETFVKGYGLHHHLRDAHGINENWIAERSELPLSGPLKDLQCSICMKVLASKGNYERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLLGDTEVYPKKVKCNICYKAFHVQVKLDCHLRTQHGIIVDKERSAGKQEIVCDYCFRVFENEYALGTHKIYHRTIGYYGCMYCKKKFNTLTVYRKHKNHHMAQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWFTEPKESIEETCHICNKRFYNLHKHLTYHEQNKCKKCNEYFYSRADFDSHLCAIESDDEGTAYVGNDNAFQYEECRFCFKPITKKSTKRLHDQIHKGSGAISCRFCPLKFKTMDAFNIHAFSHRSRKYNKKPIKCRICREKFVRYGPFIKHMKLVHKSPKKVHYRAVVKPDKCVVCGDDFPNLHNHYRAHLLNQCQGCLKYFTSYKAITKHECAKEDADPSKVFTSDANLTQLINTYVPQDEKDDEKYYGYTDNEEEEDDIEPQVLGEDEESQESKDIPMLPSPIISDVLSLFKAEMNGLDEMEGEVNGVVDNMAEVVDLSDDDSVGVDESVMPEVVVIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00785388;
90% Identity: iTF_00447470;
80% Identity: -