Basic Information

Insect: Diarsia dahlii
Gene Symbol: -
Assembly: GCA_949775195.1
Location: OX459217.1:7012729-7022969[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 7e-05 0.0089 17.8 1.6 1 23 78 101 78 101 0.96

2 33 0.14 18 7.4 0.0 2 23 130 152 129 152 0.96

3 33 0.014 1.8 10.6 0.4 1 23 200 222 200 222 0.97

4 33 0.54 68 5.6 0.8 1 21 227 247 227 250 0.88

5 33 2.1 2.7e+02 3.7 1.8 2 19 258 275 257 280 0.79

6 33 0.06 7.6 8.6 4.0 2 23 288 310 287 310 0.96

7 33 0.03 3.7 9.6 3.8 1 22 379 400 379 402 0.90

8 33 0.76 97 5.1 0.1 2 23 432 454 431 454 0.95

9 33 0.81 1e+02 5.0 4.9 2 23 477 498 476 498 0.97

10 33 0.0012 0.16 13.9 0.2 1 23 502 524 502 524 0.97

11 33 0.13 17 7.5 2.0 1 23 529 552 529 552 0.92

12 33 0.097 12 7.9 0.9 2 23 560 582 559 582 0.93

13 33 0.00093 0.12 14.3 0.9 2 23 590 612 589 612 0.96

14 33 0.0028 0.35 12.8 2.1 1 23 618 640 618 640 0.95

15 33 3.2e-06 0.0004 22.0 5.0 1 23 646 668 646 668 0.99

16 33 0.17 21 7.2 0.6 1 15 673 687 673 690 0.91

17 33 0.0019 0.24 13.3 0.1 1 23 761 784 761 784 0.94

18 33 0.15 19 7.3 0.0 2 23 813 835 812 835 0.94

19 33 0.016 2 10.4 2.6 1 23 883 905 883 905 0.98

20 33 0.37 46 6.1 1.7 1 23 910 933 910 933 0.93

21 33 0.94 1.2e+02 4.8 0.4 2 23 942 964 941 964 0.93

22 33 0.00027 0.034 16.0 2.9 1 23 971 994 971 994 0.98

23 33 0.013 1.6 10.7 5.3 1 23 1000 1022 1000 1022 0.98

24 33 3.5e-06 0.00044 21.9 0.8 1 23 1028 1050 1028 1050 0.99

25 33 0.15 19 7.3 0.7 1 14 1056 1069 1056 1073 0.90

26 33 0.16 21 7.2 1.5 1 23 1139 1162 1139 1162 0.94

27 33 0.0026 0.33 12.9 1.4 2 23 1235 1256 1234 1256 0.97

28 33 0.018 2.3 10.2 0.0 1 23 1260 1282 1260 1282 0.97

29 33 0.23 28 6.8 0.2 2 23 1318 1340 1317 1340 0.93

30 33 0.00012 0.015 17.1 0.7 1 23 1347 1370 1347 1370 0.98

31 33 2.7e-06 0.00035 22.2 1.3 1 23 1376 1398 1376 1398 0.98

32 33 0.00011 0.014 17.2 1.7 1 23 1404 1426 1404 1426 0.99

33 33 4.6e-05 0.0058 18.4 0.4 1 23 1432 1454 1432 1454 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	7e-05	0.0089	17.8	1.6	1	23	78	101	78	101	0.96
2	33	0.14	18	7.4	0.0	2	23	130	152	129	152	0.96
3	33	0.014	1.8	10.6	0.4	1	23	200	222	200	222	0.97
4	33	0.54	68	5.6	0.8	1	21	227	247	227	250	0.88
5	33	2.1	2.7e+02	3.7	1.8	2	19	258	275	257	280	0.79
6	33	0.06	7.6	8.6	4.0	2	23	288	310	287	310	0.96
7	33	0.03	3.7	9.6	3.8	1	22	379	400	379	402	0.90
8	33	0.76	97	5.1	0.1	2	23	432	454	431	454	0.95
9	33	0.81	1e+02	5.0	4.9	2	23	477	498	476	498	0.97
10	33	0.0012	0.16	13.9	0.2	1	23	502	524	502	524	0.97
11	33	0.13	17	7.5	2.0	1	23	529	552	529	552	0.92
12	33	0.097	12	7.9	0.9	2	23	560	582	559	582	0.93
13	33	0.00093	0.12	14.3	0.9	2	23	590	612	589	612	0.96
14	33	0.0028	0.35	12.8	2.1	1	23	618	640	618	640	0.95
15	33	3.2e-06	0.0004	22.0	5.0	1	23	646	668	646	668	0.99
16	33	0.17	21	7.2	0.6	1	15	673	687	673	690	0.91
17	33	0.0019	0.24	13.3	0.1	1	23	761	784	761	784	0.94
18	33	0.15	19	7.3	0.0	2	23	813	835	812	835	0.94
19	33	0.016	2	10.4	2.6	1	23	883	905	883	905	0.98
20	33	0.37	46	6.1	1.7	1	23	910	933	910	933	0.93
21	33	0.94	1.2e+02	4.8	0.4	2	23	942	964	941	964	0.93
22	33	0.00027	0.034	16.0	2.9	1	23	971	994	971	994	0.98
23	33	0.013	1.6	10.7	5.3	1	23	1000	1022	1000	1022	0.98
24	33	3.5e-06	0.00044	21.9	0.8	1	23	1028	1050	1028	1050	0.99
25	33	0.15	19	7.3	0.7	1	14	1056	1069	1056	1073	0.90
26	33	0.16	21	7.2	1.5	1	23	1139	1162	1139	1162	0.94
27	33	0.0026	0.33	12.9	1.4	2	23	1235	1256	1234	1256	0.97
28	33	0.018	2.3	10.2	0.0	1	23	1260	1282	1260	1282	0.97
29	33	0.23	28	6.8	0.2	2	23	1318	1340	1317	1340	0.93
30	33	0.00012	0.015	17.1	0.7	1	23	1347	1370	1347	1370	0.98
31	33	2.7e-06	0.00035	22.2	1.3	1	23	1376	1398	1376	1398	0.98
32	33	0.00011	0.014	17.2	1.7	1	23	1404	1426	1404	1426	0.99
33	33	4.6e-05	0.0058	18.4	0.4	1	23	1432	1454	1432	1454	0.99

Sequence Information

Coding Sequence: ATGGAGTTATTGGAGTGTTTGCTGACTTGCTGTACTGGAACTAAAACCACTGAAGTTCCGAAAGCAAATATTGAAGAAAAACCGAAACGGAAGAGAATAAAAGGAGTTCTCACTGAAATCGGTAAAGCGAGGATAGCAATGTGCGAGGAACTGAAGAAACACCGCTCAAATCTTCAAGAAATTCTTACTTACTCCAATGCAACGCCTTTTCTCGGAATAAATTATCGAGGTTATATGTGTTGCTATTGTGATACACAGTATACAGACCCCGCTGATCTGAAGAAGCATATTCGTGATAATCATCGTCGCTTATACAGTGCTGTAACTCCAATTGAAAAGATTACCAGAAAAGATGAATTTTGTGTCAAGCTGGACTTAACAGACTTACGATGCACACTCTGCGACGCTGAAATAGACACTTTAGAAAACTTGTTAATTCATCTAAAGAGTGAACACGAAAGGGAAATACACATGGACATTAAAAACCAATTCTTACCGTTTAAGTTCAGTAGCGAAGTCTTAAAATGTTGTCTGTGCCCAAGTGTTTTTGAAAAGTTTAAAATTTTGCAATTACATATGCACACTCACTATAGAAATTTTATTTGCGAATTGTGTGATATGGGTTATATTACCGGCGGTTGTCTCAAAAGACACGCCCAGACACACATAAAAGGGGAGTTTAAATGTAGCTACTGCTCCAATACCTATGACACTCTTAGGAAGGTAAAAAGTCACGAAGCAGCCGTTCACGTCCACAAGTATCTGAGAAATAAGTGTTGGTTCTGCAAAAAGATGTTTAAAAATCATCAGAAGAGGGATGACCATGTAGCTGAAGTGCATGGCGTGCAAAGTAACCTGATTAAATGTCGTGCTTGCGATAAGACTTTTACTTGCAAAAGATCTCTGACAATTCATACAAGGAGGGATCACTTGATTGAGCGTAAGCACAAATGTATCATCAAATTAAAGAAAGAACCTGAACCAAAACCAAATAAACCGACAGCCAAGCCAAAGCCGCCCGCTGGTAAAACAAAACCGGCTGTAAGAGAGGAACTAGAAAAGCAATCGAATAACACCCAAATGATTATAATGTACAGCAATGCAACCCCTTTCCTACAAAAGATAGACACGGGTTACGTCTGTTGCTACTGCAAGGAACAATTTCAGAATCCTGCCGATCTAAAGAAGCATAACCACGAAATGCATGGAGACAAATATGACCCAGTATCTCCAAACGTTATTATGAACAGCAGGAAATCTGAATTTTGCGTCAAATTAGACATTACAGGCTTACAATGTAAACTCTGCAGCACAGACATCCCGTCTTTAGAGGCACTTAAAGATCATCTTCAAAATGAgcacaagaaaaaaatattcacgGATATCAAGAATAAGATCATACCATTCAAGTTCGAAAAAGAAGATATTCGTTGCTGCATTTGTTCCAACGTATTCGAAAAGTTTCGGAAATTACAGGAGCATATGCATTCACATTACAGGAATTTTGTTTGCGAACAGTGCGATCTAGGTTTCGTGACCCTTACAAGTCTAAAAAGTCACGCAGAAAAACACAAATTAGGCGAATTCAAATGCCAGTATTGCCCCAAGATATATGATACGTATCGTAAGAAGAAATCCCACGAAAAAGCGGTGCATATAACAGGATATTTGCTGAGCAGATGCGGGTACTGTAACGAACGATTCACAAGCACCAAAAACAAGGATGAACATCTAGCTAAAGTACATGGCGTTCAGTTACGTACACTCAAATGCCAAGCATGTGAAAGAACTTTCGAGAATAAAAGAGCTTTGACAATACACACGAGAAGGGATCACTTGATGGAAAGAAAACACAAATGCTCTCAATGTGAAATGTCATTTTTCAACGCTAGCAGTTTAAAAATGCACGCAGTCAAGCATTCAGGCTTGAAGGAGTTTCAGTGTGATGTGTGTCAGAAATGTTACGCTCAAAAGAAGACTTTGAAGCAGCATATGAGGACACATTCAGATGAACGCTTTAAGTGTGAACACTGCGAGCAAGCATTCGTGAAGAAGAGCAGTAACCAAGAAACAGTGAGCAAGAAAGTTGAAATCAAACCTTTAGAACCAGCAGTATTAGTTGTCGTAAGACCAGAAAGAAAAACCAAATCGCAGGTAACTACgcccaaacaaataaaattcaagcagGATGCCACTGAGTTGGAGAAACATCGCTACAACCTCGGGCAAATCTTAAAATATTCTAACGGAACACCAATAATGCGTCGTGGAGGCGTTGGATACGTGTGCAGCTACTGTTTCCAAGAATTCCCAGAGCCTGGTGACCTAAAAAAGCATACACTAGCAGAACACACGTGTAAAACAGACCCTACAAGCAGATACTTTAGAAACCCTAGCATGGCAGAATACAATGTCAAAATAGACATCACTAACCTCGAGTGCACGATATGTGCTAAAACCATAGACAGTCTGGAAGATTTATTGACCCATTTGCAAGAGGAGcatcaaaaaatgatttacaCTGACATTTCAAATCATTTCATTCCTTTCAAATTTCTAACAGATGATCTGACTTGCTGCCTATGTCAGAGTGTTTTCGACAAGTTTAAAATACTTCAAGAACATATGCATTCACACTACAGGAACTTCGTATGCGAAGATTGCGATTCTGGGTTCGTTACTCGAGGGTGTTGGCTCAGACATCGCCATACACACTTAAAGGGAAATTTCCCTTGCAGCTTCTGTTCGAAAGTTTTTGACACGATGATGAAGAAGCGGTATCATGAGAGAAGTATCCACATTTACGCTGATAAATTTCCCAATAAATGCGCATATTGCCACGCAGGTTTTAAAGAGTACGCTGATAAGGAAATTCACATGACTGAAGTCCACGGTGCTAAAGAATCACTGTACAAATGTAGTTCTTGTGACAAAAGTTATAAAAGCAAGCGTAGACTGAGGGTGCACGTCAAAAGAGACCATCTATTAGAGAGGAAACACAAATGTCTGACGTGTGACATGACATTCTTTTCTTCTCATGATGTTAAGCAGCATATGATCAAACACACGGGGGAGAGGAACTTTCAATGCACAGTTTGTCTGAAATCTTTTGGGAGAAATACCAATCTCGTCAGCCATATGAGAATCCATAACGATGATCGGCGGTTCAAATGTGAATTTTGTGGTTTATCGTTTATTCAAAAGGATAAACAAGAAAAAGTGGCTGCAGCTACGAACATCAAAATAGAACCGAAATCTGAAGAAATAGTACCGAAAGaagaaaatatacaaataaaaccGGAGTCAGCACCTAAGCCACGCATAAAGAGACTCTTACACAAGCATGTCCACAATCTAAAACTAATACTAGAATCTTCGAACGCCACGATGATAAACAAACATTGCGATATGGGCTATCTGTGCTGCTACTGCACGGATACTTTCAGTGAACCCACAGATTTGAAAGAACACACTTTATCGGAACATAATCATGAAAAAAATAACCCTAGCCACGTAAAAGTCAGATCAGCAGCTTCGTTTTTAGTCAAACTGGACATTACAAACCTAAAATGCATTATATGCAGCGAAAGTATAGATTCTGTAGAAGATCTATTCGGCCATCTGACAGAGAAACATAATAAGAATTTTCATACTGAtattaaaaatcaaatatttcctTTCACGTTCAATACGAAGCAACTGAAATGCAGCAAATGTGCGGTCGCTTTTGCCACTTTCAGCTCATTAACTGAGCATATGCACAGACATTACCAAAATTTCATTTGCAAGGAATGCCTTGCTGGATTCATCAATCATGCGGCGTTAGCCAATCATATCATCATCCACAAGAAAGGGGTCTTCAACTGCCGATATTGTGCTGATAAATTCGACAACGTCTTGAAGAGAAGGAACCACGAGTTTCGCAACCATCGCCGAACTGCTAACTCAATTAAATGCAAGTTCTGCAATGAAAGTTTTCAAGAACCTATTCAAAAGGAAGCGCATCTGGTTACGGTGCATGGAGTTACTCCTCGGAAATATGAGTGCACAGCTTGTGAAAGGAACTTTCCTAGTAGTAGTTTTCTTCGGGCACATATTAGGCGATTCCATCTGCATGAGAGAAATCACAAATGTTCTGAGTGTGACAAGGCATTCTTCAGGAATGGCGATCTCAAAAGTCACATGATAGTTCATACTGGGGCTAAGAATTTCAAATGTAGCGTTTGTTCTAAATTCTATGCAACGAAATCTATTCTGAGACAGCATATGAGAATTCATAACAATGAAAGGCGCTTCAAATGTACAGTATGTGAGCAGGCATTTGTGCAGAAACCTAGTCTTGACTGGCATATGAAGAAGCATGCATAG
Protein Sequence: MELLECLLTCCTGTKTTEVPKANIEEKPKRKRIKGVLTEIGKARIAMCEELKKHRSNLQEILTYSNATPFLGINYRGYMCCYCDTQYTDPADLKKHIRDNHRRLYSAVTPIEKITRKDEFCVKLDLTDLRCTLCDAEIDTLENLLIHLKSEHEREIHMDIKNQFLPFKFSSEVLKCCLCPSVFEKFKILQLHMHTHYRNFICELCDMGYITGGCLKRHAQTHIKGEFKCSYCSNTYDTLRKVKSHEAAVHVHKYLRNKCWFCKKMFKNHQKRDDHVAEVHGVQSNLIKCRACDKTFTCKRSLTIHTRRDHLIERKHKCIIKLKKEPEPKPNKPTAKPKPPAGKTKPAVREELEKQSNNTQMIIMYSNATPFLQKIDTGYVCCYCKEQFQNPADLKKHNHEMHGDKYDPVSPNVIMNSRKSEFCVKLDITGLQCKLCSTDIPSLEALKDHLQNEHKKKIFTDIKNKIIPFKFEKEDIRCCICSNVFEKFRKLQEHMHSHYRNFVCEQCDLGFVTLTSLKSHAEKHKLGEFKCQYCPKIYDTYRKKKSHEKAVHITGYLLSRCGYCNERFTSTKNKDEHLAKVHGVQLRTLKCQACERTFENKRALTIHTRRDHLMERKHKCSQCEMSFFNASSLKMHAVKHSGLKEFQCDVCQKCYAQKKTLKQHMRTHSDERFKCEHCEQAFVKKSSNQETVSKKVEIKPLEPAVLVVVRPERKTKSQVTTPKQIKFKQDATELEKHRYNLGQILKYSNGTPIMRRGGVGYVCSYCFQEFPEPGDLKKHTLAEHTCKTDPTSRYFRNPSMAEYNVKIDITNLECTICAKTIDSLEDLLTHLQEEHQKMIYTDISNHFIPFKFLTDDLTCCLCQSVFDKFKILQEHMHSHYRNFVCEDCDSGFVTRGCWLRHRHTHLKGNFPCSFCSKVFDTMMKKRYHERSIHIYADKFPNKCAYCHAGFKEYADKEIHMTEVHGAKESLYKCSSCDKSYKSKRRLRVHVKRDHLLERKHKCLTCDMTFFSSHDVKQHMIKHTGERNFQCTVCLKSFGRNTNLVSHMRIHNDDRRFKCEFCGLSFIQKDKQEKVAAATNIKIEPKSEEIVPKEENIQIKPESAPKPRIKRLLHKHVHNLKLILESSNATMINKHCDMGYLCCYCTDTFSEPTDLKEHTLSEHNHEKNNPSHVKVRSAASFLVKLDITNLKCIICSESIDSVEDLFGHLTEKHNKNFHTDIKNQIFPFTFNTKQLKCSKCAVAFATFSSLTEHMHRHYQNFICKECLAGFINHAALANHIIIHKKGVFNCRYCADKFDNVLKRRNHEFRNHRRTANSIKCKFCNESFQEPIQKEAHLVTVHGVTPRKYECTACERNFPSSSFLRAHIRRFHLHERNHKCSECDKAFFRNGDLKSHMIVHTGAKNFKCSVCSKFYATKSILRQHMRIHNNERRFKCTVCEQAFVQKPSLDWHMKKHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -