Ddah014011.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- -
- Assembly
- GCA_949775195.1
- Location
- OX459196.1:8142550-8144959[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-07 0.00014 22.8 0.0 17 43 1 27 1 29 0.93 2 2 7.8 6.7e+03 -1.7 0.0 27 42 86 102 86 104 0.89
Sequence Information
- Coding Sequence
- atgggTATAAGGGAAGCATGTCGGATTTATGGCGTACCTAAAACAACTGTGCATGATCGGCTTTCGGGTAAAGTTGCTGTAAACAAGATGCCTAAAGTAGGTCCTGACCCTGTTTTAGGACGCGAGGGTgaagaaaagttaaaaaaatgggTATTACaaatggcaaaatgtgggtttcctataaataaaaaagaacttttTGAAAGCGTGTCGAAAATTATTCGTGATACTGGCATAAAAAACCCATTTAAGGATGGAATACCAGGGGACACATGGTACCAGTCATTTTTAAGACGTCACCCTGAGATAAGTGTAAGGGAGGCAGAGGGAATCAATAATGCAAGGGCAGCAGTAACCGAGACCCGAGTACGACTATGGTTTAAAGATCTCAGGGAGTATATACAATCCATAGACGAAATGGATATATTTGAAGATCCAGATAGAATTTTCAACGGGGATGAGACAGGGTTTTCTCTGTGCCCAAAAAGTGGTAAGATTTTAGGACCTAGAGGGTACAAAAACCTCTACATAATAAAAAAGAGTAACGAAAAAGATAATGTCACCGTATTGGTGGTATTCACAGCGAGTGGGAAAATATGTCCACCTTTAGTAGTATTTCCGTACGTAAGACCACCCAAAGCCCTCATTGATAACATGCCTACATCATGGGTGCTTGGACGATCAGAAAGTGGTTGGATGAAAAGTGATGTATTCTATGAGTACATCTGCAATAGTTATAATACATGGCTGACTGAAAACGGGATCAAGAAACCCGTAATTCTTTTTATCGATGGACACAAGTCACATATGACTTTATCGTTGAGTCAATTTTGTGAAGCGAATGGAATCATTTTATATGCCTTACCAGCCAATACAACTCACATGCTTCAGCCGGCTGACGTGAGCGTCTTTAAGCCGCTTAAACAAGAGTGGAAAAACACAATTCGGATCTGGCAAGCGCGTGAAGAAAATGTTAACCAAACCGTCACAAAAATTAACTTCTGCAAAATTCTACATGAGACTTTATCAACTATCAACTTGGAAGAAGCTATAAAAAATGGTTTCCGAAAATGTGGATTGTATCCATTAAATGAAGATGCTGTGGACTACACAAAATGTGTAAAAGATACACAACGCAAGGTAAGAACTTCGAACTCCAATAGTAAAAAGTCAGTATCTGCCAAAGATTATGACGCAGCCTCAAACATTATTTCGTTAATTCAGGACGACATTCGTAAGCACAACATTGACACCAAGGTAATTTTGGCGGAAATAGCTAAAGCTAAAACAAAGTTCCTTGCAAATCGCCGTTCTAAATCCAAGACACCAAGAACTTCTGCAGCTTCCAACCAAAGCATTAGTATTCTTGCTGATGAAATTCTAGCTGAAGCTAACACTGCAATTACTCCAGACAATTTAAGTTTCATTGAGCCTGAATTCGCCATGCCACAAACCCCTGCATCTCTTAGCCAACAATTAAACTTATTAACCGCTGAGGTAAGAACCGATGCAAATATATATACCACTGACAGCAGTATTGAAAATATAAGTTTTCCTCAGACTGGATCGTATATTTCGCTGAACAATATATCGCTTATGCCGTTTAATGAGTTTGAGATATCTCAGGATCAAAATAGCTCACTAAGTGACCACTCTGTGTCAGAAAACCAATGTTTTCCTATTACGGTATCAGCTGATATCCATAATGCTGAGAAAGAAAAGACAGTGGACATTTTACCACTTAAAGACATTCAGGCATCAACTATCAATGTATTAACAGGCAAACATAAATCTCCAAAAGCTAACCAGTTCCAAGAAAACCATATTGTAATGGATGAAATCATAGAATATGAAGATCTTGAGAAGCAGCACAAATTGATTATACCTGCCAGTTTTGTACTCTCTAATAAATATACGTGA
- Protein Sequence
- MGIREACRIYGVPKTTVHDRLSGKVAVNKMPKVGPDPVLGREGEEKLKKWVLQMAKCGFPINKKELFESVSKIIRDTGIKNPFKDGIPGDTWYQSFLRRHPEISVREAEGINNARAAVTETRVRLWFKDLREYIQSIDEMDIFEDPDRIFNGDETGFSLCPKSGKILGPRGYKNLYIIKKSNEKDNVTVLVVFTASGKICPPLVVFPYVRPPKALIDNMPTSWVLGRSESGWMKSDVFYEYICNSYNTWLTENGIKKPVILFIDGHKSHMTLSLSQFCEANGIILYALPANTTHMLQPADVSVFKPLKQEWKNTIRIWQAREENVNQTVTKINFCKILHETLSTINLEEAIKNGFRKCGLYPLNEDAVDYTKCVKDTQRKVRTSNSNSKKSVSAKDYDAASNIISLIQDDIRKHNIDTKVILAEIAKAKTKFLANRRSKSKTPRTSAASNQSISILADEILAEANTAITPDNLSFIEPEFAMPQTPASLSQQLNLLTAEVRTDANIYTTDSSIENISFPQTGSYISLNNISLMPFNEFEISQDQNSSLSDHSVSENQCFPITVSADIHNAEKEKTVDILPLKDIQASTINVLTGKHKSPKANQFQENHIVMDEIIEYEDLEKQHKLIIPASFVLSNKYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00446069;
- 90% Identity
- -
- 80% Identity
- -