Ddah016576.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- -
- Assembly
- GCA_949775195.1
- Location
- OX459197.1:19130428-19130760[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8 8.4e+03 -2.0 0.2 35 45 3 13 2 13 0.79 2 2 7.1e-08 6.1e-05 24.0 0.0 2 38 26 62 25 67 0.91
Sequence Information
- Coding Sequence
- ATGGTGCGTACTTACCAAAGAAAGTACACTAATTCCAGAAATGGTAAAACTTTTGCACCGTATCAGAGTTATTCAAAGGAAAATTTGGAAAACGCCATAGAGGCTGTTAAGTCTGGAAAACTTAAGCTAACTGATGCTGCCAATACTTATGACATACTTAAGAGCACGCTATGTAGGAAATATAGAAACTTAAATTGCACGCAAGATAAAGCTGGACATCCAACATTGTTTACTCCTGAAGAGGAGAATTCGTTTATACGAaacatattaattttaagtgaaTGGGAATTTCCCTTCGACTGTATGGATTCGAGTATTTACTTCGAGTATTAG
- Protein Sequence
- MVRTYQRKYTNSRNGKTFAPYQSYSKENLENAIEAVKSGKLKLTDAANTYDILKSTLCRKYRNLNCTQDKAGHPTLFTPEEENSFIRNILILSEWEFPFDCMDSSIYFEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156215;
- 90% Identity
- -
- 80% Identity
- -