Ddah031543.2
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- -
- Assembly
- GCA_949775195.1
- Location
- OX459208.1:19474590-19476975[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-07 0.00017 22.6 0.0 17 43 1 27 1 29 0.93 2 3 9.2 7.9e+03 -1.9 0.0 27 42 34 50 34 52 0.89 3 3 9.7 8.3e+03 -2.0 0.0 16 25 727 736 724 736 0.83
Sequence Information
- Coding Sequence
- atgggTATAAGGGAAGCATGTCGGATTTATGGCGTACCTAAAACAACTGTGCATGATCGGCTTTCGGGTAAAGTTGCTGTAAACAAGATGCCTAAAGATGGAATACCAGGGGACACATGGTACCAGTCATTTTTAAGACGTCACCCTGAGATAAGTGTAAGGGAGGCAGAGGGAATCAATAATGCAAGGGCAGCAGTAACCGAGACCCGAGTACGACTATGGTTTAAAGATCTCAGGGAGTATATACAATCCATAGACGAAATGGATATATTTGAAGATCCAGATAGAATTTTCAACGGGGATGAGACAGGGTTTTCTCTGTGCCCAAAAAGTGGTAAGATTTTAGGACCTAGAGGGTACAAAAACCTCTACATAATAAAAAAGAGTAACGAAAAAGATAATGTCACCATATTGGTGGTATTCACAGCGAGTGGGAAAATATGTCCACCTTTAGTAGTATTTCCGTACGTAAGACCACCCAAAGCCCTCATTGATAACATGCCTACATCATGGGTGCTTGGACGATCAGAAAGTGGTTGGATGAAAAGTGATGTATTCTATGAGTACATCTGCAATAGTTATAATACATGGCTGACTGAAAACGGGATCAAGAAACCCGTAATTCTTTTTATCGATGGACACAAGTCACATATGACTTTATCGTTGAGTCAATTTTGTGAAGCGAATGGAATCATTTTATATGCCTTACCAGCCAATACAACTCACATGCTTCAGCCGGCTGACGTGAGCGTCTTTAAGCCGCTTAAACAAGAGTGGAAAAACACAATTCGGATCTGGCAAGCGCGTGAAGAAAATGTTAACCAAACCGTCACAAAAATTAACTTCTGCAAAATTCTACATGAGACTTTATCAACTATCAACTTGGAAGAAGCTATAAAAAATGGTTTCCGAAAATGTGGATTGTATCCATTAAATGAAGATGCTGTGGACTACACAAAATGTGTAAAAGATACACAACGCAAGGTAAGAACTTCGAACTCCAATAGTAAAAAGTCAGTATCTGCCAAAGATTATGACGCAGCCTCAAACATTATTTCGTTAATTCAGGACGACATTCGTAAGCACAACATTGACACCAAGGTAATTTTGGCGGAAATAGCTAAAGCTAAAACAAAGTTCCTTGCAAATCGCCGTTCTAAATCCAAGACACCAAGAACTTCTGCAGCTTCCAACCAAAGCATTAGTATTCTTGCTGATGAAATTCTAGCTGAAGCTAACACTGCAATTACTCCAGACAATTTAAGTTTAATTGAGCCTGAATTCGCCATGCCACAAACCCCTGCATCTCTTAGCCAACAATTAAACTTATTAACCGCTGAGGTAAGAACCGATGCAAATATATATACCACTGACAGCAATATTGAAAATATAAGTTTTCCTCAGACTGGATCGTATATTTCGCTGAACAATATATCGCTTATGCCGTTTAATGAGTTTGAGATATCTCAGGATCAAAATAGCTCACTAAGTGACCACTCTGTGTCAGAAAACCAATGTTTTCCTATTACGGTATCAGCTGATATCCATAATGCTGAGAAAGAAAAGACAGTGGACATTTTACCACTTAAAGACATTCAGGCATCAACTATCAATGTATTAACAGGCAAACATAAATCTCCAAAAGCTAACCAGTTCCAAGAAAACCATATTGTAATGGATGAAATCATAGAATATGAAGATCTTGAGGTGTCTGTCTTTGATGTACCAACAGCATCACAAACCATTaatcaaactattaaacaaacACCAATTAATCAAACTTTTTCCTTTGACGACGCATTCCAAAAGCACCTAAAATTTCCTGAGCCACCAGCGCCaaaagataaaataagaaatggtcCTAAATTGCCAAGTGCAGTATCTACAAGTGCATGGAgagaattttataataaaaaagatgaagataaagaaaataaaattaaagaaaagagGCTCAAACAAGAATTAAAAGCAGaggtaaaagaaagaaaagccaAAGAGCGAGATAATAAGAAGTCAAAAACAAAGAAGACACTAcggaaaaccacaaaaaaaaatgttttaaaatgcaGCCAATGTTCCAACGATTTGATCAGCGATGTCGAAGATGAATCAGAAAAGAACATTGGTTGCGATGAATGTGTTCGCTGGTTTCATCTAAGATgtactattttaaaaaatatgtcgTATTCAGAAGCAGCACAAATTGATTTTAACCGCCAGTTTTGTACTCTCTAA
- Protein Sequence
- MGIREACRIYGVPKTTVHDRLSGKVAVNKMPKDGIPGDTWYQSFLRRHPEISVREAEGINNARAAVTETRVRLWFKDLREYIQSIDEMDIFEDPDRIFNGDETGFSLCPKSGKILGPRGYKNLYIIKKSNEKDNVTILVVFTASGKICPPLVVFPYVRPPKALIDNMPTSWVLGRSESGWMKSDVFYEYICNSYNTWLTENGIKKPVILFIDGHKSHMTLSLSQFCEANGIILYALPANTTHMLQPADVSVFKPLKQEWKNTIRIWQAREENVNQTVTKINFCKILHETLSTINLEEAIKNGFRKCGLYPLNEDAVDYTKCVKDTQRKVRTSNSNSKKSVSAKDYDAASNIISLIQDDIRKHNIDTKVILAEIAKAKTKFLANRRSKSKTPRTSAASNQSISILADEILAEANTAITPDNLSLIEPEFAMPQTPASLSQQLNLLTAEVRTDANIYTTDSNIENISFPQTGSYISLNNISLMPFNEFEISQDQNSSLSDHSVSENQCFPITVSADIHNAEKEKTVDILPLKDIQASTINVLTGKHKSPKANQFQENHIVMDEIIEYEDLEVSVFDVPTASQTINQTIKQTPINQTFSFDDAFQKHLKFPEPPAPKDKIRNGPKLPSAVSTSAWREFYNKKDEDKENKIKEKRLKQELKAEVKERKAKERDNKKSKTKKTLRKTTKKNVLKCSQCSNDLISDVEDESEKNIGCDECVRWFHLRCTILKNMSYSEAAQIDFNRQFCTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00374018;
- 90% Identity
- -
- 80% Identity
- -