Ddah003864.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- -
- Assembly
- GCA_949775195.1
- Location
- OX459191.1:5102529-5103374[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-11 1.1e-08 36.1 0.0 1 41 25 65 25 70 0.95
Sequence Information
- Coding Sequence
- ATGGTTCGAAAATATACAAGAACATTTAGAAACTTGAGAAATGGCAAACGTTTCATCCCGTACTTCTCCTATACTCGTGATGATTTGAACAAGGCATTATCAGATGTTAAATCTAAAAGACTGTCTATCAGAGAAGCAGAGGGGAAATACGGCGTCCCCAAAACTACAATTAACCGTCATTTAAAAGAGAAAAACTTAATGTATTCAAGACCAGGGCACCCTACATTATTTTCAGAGGTGGAAGAAAAAACATTCGTCGATTATATTAAACATATGGGAGAATGGGGGTTCCCCTTAGATCTAATGGATTTAAGAGTCTTCGcccaaaaatatttgcaaaaaatagGAAGGACTGTGTATAATTTAAAAGACAATTTACCGGGACGGGATTGGGCGGCTTGTTTTTTGCAGAGGCATAAAGAAAAGATTTCTAACAGATATGCTGCAAACATATCATCGGACAGAGCATCCTTAAGCTCAGAGGTGCTTGATGCATTCTTTGACCATTATGAACAAAATTTGGAAGATGTCACACCTgattgtttaataaattacgacGAGACTAACCTGACTGACGACCCTGGATCCAAAAAGTACATATTTAAGCGAGGAAAAAAGTACCCAGAGAGGATCATTAACAATTCTAAATCGTCTGTGAGTCTGATGTTTTCTGGCACAGCATCAGGGCTACTTTTGCCAGTATATGTCGTATATAAAGCAGAGCACTTGTACGATACGTGGGTCTTAGGAGGCCCAGAACACACAAGATACAACAAATCCAAAAGCGGTTTATTAAGAAAATGCCTGATTTATAACATTATTACCATTACTAGAAGTTTACActga
- Protein Sequence
- MVRKYTRTFRNLRNGKRFIPYFSYTRDDLNKALSDVKSKRLSIREAEGKYGVPKTTINRHLKEKNLMYSRPGHPTLFSEVEEKTFVDYIKHMGEWGFPLDLMDLRVFAQKYLQKIGRTVYNLKDNLPGRDWAACFLQRHKEKISNRYAANISSDRASLSSEVLDAFFDHYEQNLEDVTPDCLINYDETNLTDDPGSKKYIFKRGKKYPERIINNSKSSVSLMFSGTASGLLLPVYVVYKAEHLYDTWVLGGPEHTRYNKSKSGLLRKCLIYNIITITRSLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01025964; iTF_01062736; iTF_00446036; iTF_00446038; iTF_00446039; iTF_01230465; iTF_00300101; iTF_01230464;
- 90% Identity
- iTF_00446038;
- 80% Identity
- -