Dbru005092.1
Basic Information
- Insect
- Diarsia brunnea
- Gene Symbol
- GATA-B
- Assembly
- GCA_949774965.1
- Location
- OX458998.1:22724743-22735208[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4 1.1e+04 -2.9 0.3 12 17 69 74 68 77 0.82 2 3 1.1e-17 3.8e-14 53.0 3.9 1 34 235 267 235 269 0.97 3 3 4.2e-17 1.4e-13 51.2 7.6 1 34 302 334 302 336 0.97
Sequence Information
- Coding Sequence
- ATGAGTAACGCTATCGTGCACTTCCTGCGCGCGCGCTGCCATTGTGCGCCGACACTTAACCTAGTGAGAGCGAGCCCGCGCCCCCCCCGCGCGCCCTTTGCCCCCCTGGCACACCTCTCGCTGCGCGCTAACAACGACCAGTGCACTGGTCCACGTGGAGCCAGCGCAGGCCGGCCAGTCCCGGGGGACGCGGCGCGTGCGGGCTGGCGGCGCGGCCAGCACGTGCGCTGTGCGCTGCGGGTCGCGGGGCAGCCGCTGGAACGGGATGCGGGCTACAATGGTGGAGGAGGTGGCGCGGGTGGCGGCGGCGGTGTGTACTCGCGCTGCGCATACGCCGCGGGCTCGCCCTACTTCGGCAACGGCGCCGACATGAACGCACAGTCACAGATCTGGCCCCCCAGCGCAGGCGGCTCTCCGAACTACGGTGGCGGCGTGGTGCTGGGGGAAGAGTACGCGGATGGTGGCGCGGAGGGCGCGGGGGGCGGGGGAGGCTCGCTGCCCGCGTTCAGCGCGCGCTTCGGCGGCGCCTTCGCGTGCGCCTCCTCGCGCCCCAACACCGTGTACGGCTCCAGCGCGCTCCCCGCACCGCCCTACTCGCACCAGGACCCGTGGACTTTGGAAAGTAATCGTCGTCCACAAATGTCCGCAGCCGCCAGCCTCTCTGCCATCGACATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGATGGGACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCAGGCCGCGCCCCACGCGCCCCCGCACGACATGGGCACGAAGCGGCCCGGCATGGCGTGCACCAACTGCCGGACCACGACCACGTCGCTGTGGCGCCGCAACTCGCTGGGCGAGACCGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCGATGGCCATGAAGAAGGACTCCATACAGACAAGAAAGAGGAAACCCAAGAATAGTATAAAAGCGGAGAGAAGCATCAAGGCAGCCGTGCAGCGCACTGTGACGTCGGGCGTCAAGATCGAGAACCTGCTGGAGGGCGGCGCGCGCTCGCCGCTGGCGCTGAACTACTACGTGCAGCACGCGGTGAAGCTGGAGGAGCCGCCGCCGGCGCACGCCACGCCGCACGCGCACTcgcacgcgccgcacgccgCGCACGCGCACTCGCACGCCGCGCTGTACGACGACGAGTACCGGCGCGCGGCCGACGAGCGCCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MSNAIVHFLRARCHCAPTLNLVRASPRPPRAPFAPLAHLSLRANNDQCTGPRGASAGRPVPGDAARAGWRRGQHVRCALRVAGQPLERDAGYNGGGGGAGGGGGVYSRCAYAAGSPYFGNGADMNAQSQIWPPSAGGSPNYGGGVVLGEEYADGGAEGAGGGGGSLPAFSARFGGAFACASSRPNTVYGSSALPAPPYSHQDPWTLESNRRPQMSAAASLSAIDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRQAAPHAPPHDMGTKRPGMACTNCRTTTTSLWRRNSLGETVCNACGLYYKLHNINRPMAMKKDSIQTRKRKPKNSIKAERSIKAAVQRTVTSGVKIENLLEGGARSPLALNYYVQHAVKLEEPPPAHATPHAHSHAPHAAHAHSHAALYDDEYRRAADERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01526678;
- 90% Identity
- -
- 80% Identity
- -