Basic Information

Insect: Diarsia brunnea
Gene Symbol: ct
Assembly: GCA_949774965.1
Location: OX459016.1:1479281-1497987[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.7e-27 5.3e-23 81.8 0.0 3 70 138 206 136 212 0.94

2 3 6.7e-32 6.2e-28 97.6 0.0 4 77 538 612 536 614 0.96

3 3 9.6e-31 8.8e-27 93.9 0.0 3 75 741 814 739 818 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.7e-27	5.3e-23	81.8	3	70	138	206	136	212	0.94
2	3	6.7e-32	6.2e-28	97.6	4	77	538	612	536	614	0.96
3	3	9.6e-31	8.8e-27	93.9	3	75	741	814	739	818	0.95

Sequence Information

Coding Sequence: ATGCTTCGAGCCCTCGACCTTGGTGGTGGGGAACGATCTTTAGAGCGCAAGCCTGAAATTCGTTCGCCGAGCACCGCTCCATCGCTGCGAGACTATTCCTCCGAGCGAGAGCGAAGCGCCGAGCGCCGGGACCGGGACACAGGTGTGGAGGAGTGGCCCAGCACACCGCCGCCGCTCAACAACAACACGACGCACCACAACAACAACGGGCCCACGCTGCCGCTGCCACTGCCGCCGCCGAGCCCTTTCCGCTTCGAAGAGCACCGCACCTACCGGTTCGCCGAGGACATGGGACCTCTGCCACCCGGCGCTCTAGTCGGACGTCTCGGCGACTCTCTCATCCCCAAAGGCGACCCCATGGAGGCCCGACTACAAGAGATGCTAAGATATAACATCGACAAATATGCGAATACGAATTTGGATACGTTGCATATAAGCCGGAGAGTGCGAGAGCTGCTGTCGGTCCACAATATCGGACAGAGGCTGTTCGCTAAGTACGTGCTGGGTCTGTCCCAAGGGACGGTGTCGGAACTGCTGTCGAAGCCGAAGCCCTGGGACAAGCTGACGGAGAAGGGGCGCGACTCATACCGCAAGATGCACGCGTGGGCCTGCGACGAAGCTGCCATCATGCTGCTCAAGTCACTGATCCCTAAAAAAGttGGGACGAAGGATGGCACCGGTGCAGTGTTCGGTCGGCCGGAGGGTGAGGGCGACGACAGGCTCACGCACGCGATCTTGAGCGAAGCGCACATGATGAAGACGCCCGGTGGACCTCCCCACAATGATGACTCCAGAAGCAATGAAGACTCTAGCTCGCCGAGGACTCAGTGCCCCTCTCCTTTCTCCAATAAGGATGGGAGTCAAAACAGAAGACTCAAGAAGTACGAAAACGATGACATTCCTCAAGAAAAGGTAGCGCGCATATACCAGGAGGAGCTGGCCAAAATCATGACAAGGAGAGTAGAGGACATCCGCCGCGAAGGTTTCCCTGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCACCACACATGGAGAGGCCACCGGAAGACATCCGTATGGCTCTAGAAGCGTACCACAGAGAACTTGCCAAGATCCAGCCGGGTGGCAACATTCCCAACCTCCACAACTTGCCAGCCATGCCGCCCTTTCCGAACCTCCTCGCCTTGCAGCAGCAGGCGATGCATCAAGCACAGAACCAACAGATGAACGGCTCAGGAGCGGTCCAAGATCTCTCTTTGCCTAAAGAAAAACACGCCAAAATAAATGGAATGACTGATAGTGATAAGGATAGATCAATGGATGCCGAAGAGGCTATAAGGCATGCGGGAAGCGCATTCTCATTAGTAAGGCCAAAGCTAGAGCCGGGACAGCAATCACAAACTGGATCATCTGCGTCCAGTCCACTGGGGAACGCGATACTACCACCTGCAATCACTCCAAATGATGATTTCAGTAATTCAGCGGCAGCAAGCCCACTGCAGCGGATGGCTTCGATCACGAACAGTCTGATCTCCCAGCCGTCAAACCCCCCTCATCATCCACCCGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAACAATTTGAATACTGAAGATATAGTAAGGAGAGTGAAAGAGGCTCTGAGCCAGTACTCCATTAGCCAAAGACTGTTCGGAGAATCCGTACTTGGTCTATCACAAGGATCCGTGAGTGACTTGCTAGCGAGACCAAAGCCCTGGCATATGCTGACGCAGAAGGGACGAGAGCCTTTCATTCGTATGAAGATGTTCTTGGAAGATGACAATGCAGTCCACAAGCTGGTTGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACTGGAAACTACAGCGGAGCACCTCCATGTCCGCCGAATATGAACAAACCCATGCCGCCAACACAGAAGATGATTTCCGACGCGACCTCCTTGCTGAGCAAGATGCAGCAGGAGCAGCTCCTGGGCGGGGGTCACCTGGGACACCTGGGCCAGCCCACGCCACTGCTGCTCACGCCGCCTGGCTTCCCGCCGCACCACGCCGTCACGCTGCCGCCGCAGCACCACGACAACAACAACAAGGAGCGCAAGGCCCCGCCGCCGCCCCAGCCGCACCACCCGCCCCCCATAATGCGCAGCCTGCACCAGCACATATCGCCGAGCGTCTACGAAATGGCCGCGCTCACTCAAGACCTAGACACGCAAACGATTACGACCAAAATTAAGGAAGCGCTACTGGCAAACAATATTGGCCAGAAAATCTTTGGCGAAGCTGTTCTAGGTCTATCACAAGGTTCCGTCAGTGAATTGCTGTCAAAACCAAAACCCTGGCATATGCTCAGCATCAAGGGTAGGGAACCTTTCATTCGCATGCAGCTGTGGTTAAGCGATGCCCACAATATCGACCGTCTACAGGCTTTGAAAAATGAAAGACGGGAAGCGAGTAAACGACGACGGTCAAGCGGCCCCGGACAAGACAACTCGTCCGACACATCCTCGAATGATACGTCCGAGTTCTACCACTCGAGCTCACCGGGTCCCACAGCCGGAGCGCCGTGTGCCAAGAAACAACGAGTGCTGTTCTCCGAAGAGCAGAAGGAGGCACTCAGATTAGCATTCGCACTTGATCCCTACCCAAACATGCCAACGATCGAATTCCTCGCCGCAGAATTGGGTCTGTCCTCGCGAACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTAAAACAACAAGCGCCTCATGGCTTGCCCGCCGAACCTCCCGCGCGGGATCAGTCCTCGGCGCCTTTCGACCCAGTCCAGTTCCGTCTTCTCCTCAATCAGAGACTACTAGAACTTCAGAAAGAGAGGATGGGTCTCGCTGGCGTACCCCTTCCCTACCCGCCTTATTTCGCGGCCAATTCCAACCTAGCGGCACTGATTGGTCGCGGGCTAATACCCCCGGAAGACCAGGTGAAGGACCAGTCCGGCGGCCTCGACCTTTCGATGCCGCTGAAACGAGAACCCGATGGTGATGACTTCGAGGACGATGATGTCGAGAGCAACCTCGGCTCCGAAGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAGGCGGCGTCGACACCGCACAATACCGGTCGGTCCAGCAGACGAAAGCCTGCAGCGCCGCAGTGGGTTAATCCTGACTGGCAGGATGAGAAGCCACGTAACCCTGACGAAGTGATAATTAATGGGGTTTGCGTGATGAGAAGTGATGATTTCCGGAGAGAGGCGGAGGAGACGGTGCGCGTGGAGCCGTCGCCGGTGGCGCGCGAGGGCTCGCCGGCCGCGTCGCCCGCGCCGCGCACGCCGCACACGCCGCACACTCCCCACACGCCGCACACGCCGCGCCCGCCGCACACGCCTGACGACGTGATCCCTGAAGACAAAATTAAATCCGAGACCGACGACGGCTGGGAGTACTAA
Protein Sequence: MLRALDLGGGERSLERKPEIRSPSTAPSLRDYSSERERSAERRDRDTGVEEWPSTPPPLNNNTTHHNNNGPTLPLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGAVFGRPEGEGDDRLTHAILSEAHMMKTPGGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPAMPPFPNLLALQQQAMHQAQNQQMNGSGAVQDLSLPKEKHAKINGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSQTGSSASSPLGNAILPPAITPNDDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGGGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKAPPPPQPHHPPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDQVKDQSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHNTGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVAREGSPAASPAPRTPHTPHTPHTPHTPRPPHTPDDVIPEDKIKSETDDGWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00887212;
90% Identity: iTF_00445005;
80% Identity: iTF_00445005;