Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949774965.1
Location
OX459021.1:673940-730299[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.9e-25 2.8e-21 76.7 0.0 2 89 102 185 101 185 0.93
2 2 4.8 1.5e+04 -2.5 0.0 45 63 1273 1292 1261 1301 0.75

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAACGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCTACTATGAAACCTGATAATTTCTCGTTCACCCCGCCTCCAGAGGCacctgtgttcgaacccacgccAGAGGAATTCCTGGACCCCCTGGCATACATCAGCAAAATACGACCAATCGCTGAGAAATCGGGGATTTGCAAGATAAAACCTCCAGCGCATTGGCAGCCCCCGTTTGCAGTGGACGTAGACCGATTACGTTTCACACCGAGGATACAAAGACTCAATGAATTGGAGGCGATAACCCGCGTGAAGCTGAACTTCCTGGACCAGATCATGAAGTTCTGGGAGCTGCAGGGCTCCGTGCTCAAGATCCCCACGGTAGAACGGAAGCCACTGGACCTTTATGCTCTGCACAAGATTGTCAAGGAAGCAGGTGGCTTCGAAGTATGTTCCTCAGAGCGGAAATGGTCGAAGGTAGCCCGTCGCATGGGCTTCCCGCAAGGCAAGGGCATCGGCTCCATCCTCAAGAACCACTACGAGAAGATTCTGTATCGGTACGACATCTTCAAGAGCAATGGAGCGGTGGATAATAAGGAAACaGATATCAAAGTAAAAGGCGAACAAACGCCAGAGAAAGCAAGCGGTACCCGCAGCCGCTCAACGAGCAAGTGCACGGCGGCCGCCACGCCGCCGCCAGCGCGCCGGTTCAAGCCGGACCCGGACGGGCCCACTCCATCCGACACTGTGCCGGCTGACCGCACGCCGCAGCAGCTCCAGGAAGATGCTATGAAGACCCCGGTCAAGGAGGAGAGCCCTGAGACTAGGAGAAGTCCTCGCGAGAACAAGTGGATGTCAGCGGGCGGGTCGTGCGGCGCGCGCTCCCGCGTGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCAAACACACACCCGTTGCATCCGGACGACCCGCTGGCGAAGTACATGTGCCATGTTTGCGGGCGCGGCGACGTAGAGGAGCAGATGTTACTATGTGACGGCTGCGACGACTCTTACCATACCTTCTGCCTGCTCCCCCCGCTCGCTGACGTGCCCAAGGGAGACTGGCGCTGCCCTGTGTGTCTGGCTGAAGAGGTATCGAAACCGACAGAAGCGTTCGGCTTCGAGCAAGCGACGCGCGAGTACACGCTGCAGCAGTTCGGAGAGATGGCTGACCAGTTCAAGTCCGATTACTTCAATATGCCTGTACatATGGTGCCCACATCGACGGTAGAGAAAGAGTTCTGGCGCGTCGTGTCCTCAATAGACGAAGATGTCACCGTGGAGTACGGCGCTGATCTGCATTCCATGGACCATGGTTCTGGTTTCCCAACAAAGACGCTGTCACACTTATATCCTGGCGAGCAGCAATACGCGGACTCGTCATGGAATCTCAACAACCTGCCCGTGCTGGAGGGCTCCGTGCTCGGACACATCAATGCTGATATATCTGGGATGAAGATCCCCTGGCTATACGTTGGCATGTGCTTCGCCACATTCTGCTGGCACAACGAAGATCACTGGAGCTACTCCATCAACTATCTGCATTGGGGAGAGCCCAAGACTTGGTACGGAGTACCAAGTTCAAAAGCGGAGCAGTTCGAGGCTGCCATGAAGGCGGAAGCACCTGAGCTGTTCCAACTGCAGCCAGACTTACTACATCAGCTGGTCACCATCATGAACCCTAACGTTCTGATGAAGGCGGGAGTGCCTGTCTATAGGATGGACCAGCATGCTGGTGAATTTGTAATAACGTTCCCGCGCGCATATCACGCCGGATTCAATCAAGGATACAACTTTGCTGAAGCTGTCAACTTCACTCCTGCTGACTGgCTAAAAATGGGTCGCGAATGCATCGCCCACTACTCAACACTGCGCCGGAACTGCGTGTTCTCTCACGACGAGCTGGTCTGCAAGATGGCGCTCGAAGCCGACTCCTTGAGCCTCACCGTAGCACTGGCCGCCTATCGGGACATGAGGACCATGTTGCATGATGAGAGGAAACTCAGGAAAGGGCTGCTGGACTGGGGTGTAACGGAAGCAGAACGCGAAGCCTTCGAGCTGCTCCCGGACGACTCGCGGCAATGCCAGCTGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCGTGTGCACGCCGCACGTCGCGTGCCTGCGCCACTACACGCAGCTCTGCGACTGTCCCGCACATCTGCACAAACTCAGATACCGCTACACCCTCGACGAGCTGCCAGCCATGCTAGATAAGCTAAAGAAGAAGTCGGAACAGTTCCGGGAATGGGCGGAAGCTGTACAGAACGCACTGGACCCCGACACGCCCAAGACCTGCGACCTGGACGGGCTTAGAGCGCATTTGAAGAAGGCGCATGATCTCAAGATGCACAAAACCGAGCTCGTCCGAGCGCTCGAGACGGCAATAGAAGACGCAGAGAAGTGCGCGTCAGTGATCCAGCAACTGGACCTCAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTATCGCCTCACCATACACGAGCTCACGCTCTTCGCCGCTGAGATCGACGGACTGGCTTGTGTGCTACCTGAAGGTTCAGCAGTAAAAGAAGTGCTACGACAGACATCGGAGTTCGAGAGCCGCGCGACTGACCTGCTCAATAAAGATCTAGAGAAGACAGACCAGGCTTATGTCAGGGACTTGGAAGAGACATCAGAACTAGGCTCCCGCCTCTGCATCGTGCTACCGCAGCTGCCGCCACTCCAAGCTCGGCTGCAGCAAGTGAAGTTCCTGGAGGAGGTGCGCGCCTACCGGGAGGACTACTCCACCCTCACGCGTGACGTCATCGACCGACTGCTGAGTGACGCGGCCAACGTCGTGCCGCATCACCGGGTGGAGACTGAGAGGTCGCTGCTTTTCAACTTGAAAGAGCAAGTGGAGCAGTGGGAGAGCCGCGCGCGCCGCGTGCTGCTGGAGCCGGGCGCCGCGCGCGCGCACGTGTCGCTGGCCGAGCTGCGCGCGCTGCTGGCGGACGGGGAGGACGTGGAGGCCGCGCTGCCCTCCTACCACGCGCTGCAGACTGCCGTGGCGCACGCCAAGGACTGGCTCAGCAAGGTGGAAGAGATGCAATCAAAAGAGCTGTACCCATACATGCACAGCGTGGAGAACATAGTACGTCGCGGCACACAGATACCGCTGTCGTTGTTCGAGAAGGACCAGCTGGCGCAGGCGCTGCAGTCCGCAAGAGACTGGAAGCGCGGCACCGCCGAAATGTTCCTCAAGAGGAACTGGCCGTACGGTCTGCTGGAGGCGCTGTGCCCGCGCGCGGAGGTGCCGGGCCCGGCGCGGCGCCGCGCGCGCGGGGACGGGGGGCAGTTCCTGCGCCACTTCAGCGAGGACTCCACGCCCGCCGACATCGTGGCTGCCTTCAAACATGCCGAGCTAAGGGAACTGCAGATCGTTAAGGAGATGAGAACTCGAAACATGCGCAAAGAGGTCCGCGCGCCCGTATCAGCAGGCGTCACATTCTGCACGTGCCAGAAACGGCAGTACGGCGTCATGACGCAGTGCGAGTTGTGCAAGGACTGGTTCCATGCATCGTGCATAGCGACTGCCAGAGAAGAACGCGAGCAGTCACCGGAGCGGGTCGAGGTTCCCTTCCCCAACACAGAGCCCAAGTTCTTGTGTTCCGACTGCACGAGGACCAAGAGACCTCGCTTGGACCGTTTATTATCGCTACTGGTATGGCTGCAGCAGCTGCCGGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGATGGTGACGGAGCGCGCCATGGCGTGGCAGGACCTGGCGCGCGCGCTGCTGGCCAGCCCCGCGCTGGCCGCGCTGCCGCTGCCGGCCGACAGGGCCGCCAGTCGGGAGAAGGCCGACAAGCTCAACGCGGAGCTCAAGAAGGCCACCGGCAGGGCGCACGACTCGCATGCGCACGTCAATGCTAGGTCGTCAGCGAGTGTGGAGCACGCATACAGCGCGACGCCGCGCTCGCCCAGCACGCGGGTCGCGCCCGGACTGCTGCAGAAACTAGAAGACTTGATGCTGGAGGGAGATCTATTAGAGGTGCGGTTAGATGAGCAGGTTCAGGTGTGGAGTGCCGTAGTGGCGTGTCGCGGCGCTGAAGGTCGGCGCGCCGCGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGGTACAGACGCGACACGACGCGGGCCGCCGCAAGCGACACACGCGCGCGCCCAGACACCACCACCAGGTCAAGCGCACGCGCACGCGCCACGCACACGGTACGCACGCTCCCACAGTTGCACCAGTCGTGAAACCAACGCTCAAACGAGGCACAGCTACCACTACAAACTATTTAAATCGAAAACAGGCTCAGGGCTCATGATGCGCAAGCACTACATGGCGCGACAGGAGAGACGCAAGCGTGGCCTCGCGCCCGTCACGCGCGGCAAGCACCCGCGGGCAACCAGGATGGGTCAGCGCGCAGCAGCCAGCAGTTCGGGCACGTCTCGCGGCGGCGCCACCACCAGCACAGCACAACGACGCAGCAGTTCCTCTTCTGCATCATCAGCCGAGGATGAGGAGGACTGCGCCGCTAACAACTGTCTCAGACCTACTGGCAAAGTAGACTGGGTCCAATGCGACGGCGGCTGCGACCAGTGGTTCCACATGCATTGCGTCGGGCTGGCACGCGGCGCGCTGCGGGAAGACGACGACTACGTCTGCGGGACGTGTGCGGAACACCCCAGGgactaa
Protein Sequence
MGKCDEANVEVSMGDSASPTMKPDNFSFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIMKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSSERKWSKVARRMGFPQGKGIGSILKNHYEKILYRYDIFKSNGAVDNKETDIKVKGEQTPEKASGTRSRSTSKCTAAATPPPARRFKPDPDGPTPSDTVPADRTPQQLQEDAMKTPVKEESPETRRSPRENKWMSAGGSCGARSRVTRSTRLREHRMSNMTVSVTPAPPNTHPLHPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKTLSHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRNCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDSRQCQLCKTTCFLSCVTCVCTPHVACLRHYTQLCDCPAHLHKLRYRYTLDELPAMLDKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKKAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTSEFESRATDLLNKDLEKTDQAYVRDLEETSELGSRLCIVLPQLPPLQARLQQVKFLEEVRAYREDYSTLTRDVIDRLLSDAANVVPHHRVETERSLLFNLKEQVEQWESRARRVLLEPGAARAHVSLAELRALLADGEDVEAALPSYHALQTAVAHAKDWLSKVEEMQSKELYPYMHSVENIVRRGTQIPLSLFEKDQLAQALQSARDWKRGTAEMFLKRNWPYGLLEALCPRAEVPGPARRRARGDGGQFLRHFSEDSTPADIVAAFKHAELRELQIVKEMRTRNMRKEVRAPVSAGVTFCTCQKRQYGVMTQCELCKDWFHASCIATAREEREQSPERVEVPFPNTEPKFLCSDCTRTKRPRLDRLLSLLVWLQQLPVRLAEGEALQMVTERAMAWQDLARALLASPALAALPLPADRAASREKADKLNAELKKATGRAHDSHAHVNARSSASVEHAYSATPRSPSTRVAPGLLQKLEDLMLEGDLLEVRLDEQVQVWSAVVACRGAEGRRAARHDAGRRKRHTRAPRHHHQVKRTRTRHAHGTHAPTGTDATRRGPPQATHARAQTPPPGQAHAHAPRTRYARSHRYRRDTTRAAASDTRARPDTTTRSSARARATHTVRTLPQVQTRHDAGRRKRHTRAPRHHHQVKRTRTRHAHGTHAPTGTDATRRGPPQATHARAQTPPPGQAHAHAPRTRYARSHRYRRDTTRAAASDTRARPDTTTRSSARARATHTVRTLPQVQTRHDAGRRKRHTRAPRHHHQVKRTRTRHAHGTHAPTGTDATRRGPPQATHARAQTPPPGQAHAHAPRTRYARSHRYRRDTTRAAASDTRARPDTTTRSSARARATHTVRTLPQVQTRHDAGRRKRHTRAPRHHHQVKRTRTRHAHGTHAPTGTDATRRGPPQATHARAQTPPPGQAHAHAPRTRYARSHRYRRDTTRAAASDTRARPDTTTRSSARARATHTVRTLPQVQTRHDAGRRKRHTRAPRHHHQVKRTRTRHAHGTHAPTGTDATRRGPPQATHARAQTPPPGQAHAHAPRTRYARSHSCTSRETNAQTRHSYHYKLFKSKTGSGLMMRKHYMARQERRKRGLAPVTRGKHPRATRMGQRAAASSSGTSRGGATTSTAQRRSSSSSASSAEDEEDCAANNCLRPTGKVDWVQCDGGCDQWFHMHCVGLARGALREDDDYVCGTCAEHPRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-