Dabb039547.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- NFXL1
- Assembly
- GCA_034092305.1
- Location
- JASJET010000157.1:977614-982191[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0023 45 5.8 9.7 9 18 8 17 6 18 0.90 2 13 3 5.9e+04 -4.3 1.6 1 5 21 24 21 24 0.88 3 13 8.2e-10 1.6e-05 26.5 11.1 1 19 27 45 27 45 0.98 4 13 0.5 9.9e+03 -1.6 1.1 5 10 73 78 73 78 0.94 5 13 0.00014 2.8 9.7 6.2 10 19 94 103 91 103 0.90 6 13 0.049 9.8e+02 1.6 5.4 3 12 114 123 113 123 0.88 7 13 2.3 4.5e+04 -3.7 3.5 14 19 151 156 151 156 0.86 8 13 1.2 2.4e+04 -2.8 0.6 6 10 182 186 181 187 0.58 9 13 1.2e-05 0.25 13.1 3.4 1 11 192 202 192 206 0.94 10 13 0.23 4.5e+03 -0.5 0.9 5 10 219 224 219 225 0.90 11 13 2.5e-05 0.49 12.1 17.4 4 19 234 249 232 249 0.91 12 13 3 5.9e+04 -4.3 1.9 10 13 256 259 255 260 0.72 13 13 9.6e-07 0.019 16.6 12.8 1 18 292 311 292 312 0.89
Sequence Information
- Coding Sequence
- ATGTTTTTTGCAGAAAGCCATAAATGCTGTGATGGGAATTGTCCCCCTTGCGAAAAACCCTGTGGGCATACTCTGCAGTGTGGCAATCATAAGTGCCCATCGGTATGCCATCGGGGCTTCTGCTATCCTTGTCAACAAACGAACGAGGTGTCTTGTAGATGTGGAGCAACTAAAATTACAGTTCCTTGTGGAAGAAAACATAGGGTGAAGCCACCTAAATGTTCCAAACTATGTTTaattCGCCCAGATTGTCATCATGAAAAGCGTAATAGTCACAGATGTCATTTCGGCGATTGTCCGCCGTGCAAACAAATTTGTAATAAACGTGGATCAAATTGTGAACATTTGTGTCCAGCTCCGTGTCATTCATCTGTATTGGTAAAAATAGAAGCTCAAAAGGCGTCGATGCCGTGGGAGCAAAGCGCCCCTCTTGTGGAAAAAAGAAATTTGCCCTGCCCCGATTGTAAAGTTCCTGTAAAAGTGACATGTTTAGgtgaTCATGAAAACACAGATTGGCCTTGTTACAAGGCGAAACCATCCAGTTGCGGCAGACCATGTGGAAGAATTTTGAATTGCAGCAACCATACTTGTTCTCTACCATGTCATGCTGTTGAGGGTGCAAACAACCCAATTGAGGCTGGTACAAACTGTGAAAAATGTGAAAATCCTTGTTCTAAACCACGTCCGGATGGTTGTACTCATTTGTGCCCCAACCCTTGTCATCCAGGAAGCTGCCCACCTTGTAAACAGATGCTCAGAATTAAGTGTCATTGTGGCCTTACTCAACCTTACATATCATGCAGTGAATGGCTGAATTTGGAAAAAAGGGAAGAATTGCAGAGCTGTGGAAATCAATGCCCCAAAAATTATTCATGTGGTCATCGATGTAAATCTAACTGCCACTCTGGCGACTGTCCTAATCCAGAATCAtgcaaaaagaaaatgaaaatttcctGTCAATGCAAACGTCTGAAAAAGGAATTTCAGTGTGAAACAATTCGTAAAGGTTTAGCAATTGTAGAATGTGAcgatatttgtaaacaaaaacaaGAAGAGGACAAGAAGCAACGTGAAATTCAGAACGAAATAAGGAAGAAAGAGGAAGAGATAAAAAACCAAAAGGAGTTGGAGCAGTACCAAAAGAAGTTTGCAGGTAAAAAGAAGAACAGAGATAGGAGGGTTTACGATGAGAATGAAGAAActacttttattaaaaagtacTGGATGGTATTACTATCTGCATTCCTAATCATAACGTCAGTAGTTGTATATCAAGCTCTTGGTTAG
- Protein Sequence
- MFFAESHKCCDGNCPPCEKPCGHTLQCGNHKCPSVCHRGFCYPCQQTNEVSCRCGATKITVPCGRKHRVKPPKCSKLCLIRPDCHHEKRNSHRCHFGDCPPCKQICNKRGSNCEHLCPAPCHSSVLVKIEAQKASMPWEQSAPLVEKRNLPCPDCKVPVKVTCLGDHENTDWPCYKAKPSSCGRPCGRILNCSNHTCSLPCHAVEGANNPIEAGTNCEKCENPCSKPRPDGCTHLCPNPCHPGSCPPCKQMLRIKCHCGLTQPYISCSEWLNLEKREELQSCGNQCPKNYSCGHRCKSNCHSGDCPNPESCKKKMKISCQCKRLKKEFQCETIRKGLAIVECDDICKQKQEEDKKQREIQNEIRKKEEEIKNQKELEQYQKKFAGKKKNRDRRVYDENEETTFIKKYWMVLLSAFLIITSVVVYQALG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -