Dabb047517.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- stc
- Assembly
- GCA_034092305.1
- Location
- JASJET010000228.1:10059954-10063025[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.9 5.7e+04 -4.0 1.6 15 19 335 339 334 339 0.81 2 13 3.6e-06 0.071 14.8 13.2 4 19 383 398 381 398 0.93 3 13 1.8e-06 0.035 15.8 13.0 1 19 434 452 434 452 0.98 4 13 2e-08 0.0004 22.0 17.9 1 18 492 509 492 510 0.97 5 13 7.4e-06 0.15 13.8 14.8 4 19 557 572 550 572 0.89 6 13 1.9 3.8e+04 -3.5 2.0 5 10 601 606 601 606 0.93 7 13 0.0022 44 5.9 8.7 1 11 612 622 612 624 0.96 8 13 1.5 3.1e+04 -3.2 1.0 4 10 627 633 626 634 0.68 9 13 1.1e-09 2.1e-05 26.1 12.1 1 18 639 656 639 657 0.98 10 13 2.1 4.2e+04 -3.6 0.8 6 10 686 690 685 690 0.91 11 13 0.0037 73 5.2 14.6 1 18 696 712 696 713 0.79 12 13 1.3e-05 0.26 13.0 14.9 1 19 749 768 749 771 0.96 13 13 0.0061 1.2e+02 4.5 15.8 1 18 778 796 778 797 0.93
Sequence Information
- Coding Sequence
- ATGTCGAATTATTTTAACAGTAGTGAACAATTCCATGAGGTTCATTCAACATCCACACGTGAAATGGAATCGAGTAGTGATAATATCTTACCTGGTATTCAGTCCAATTTACAACCTACAGCGCCAGAATATTATCCTTTGAATACAAATCAAGGCgcaataagaaaaaaacatttaaggCAACACCAAGATTTCCGTGGAGGGAATGCCAAATCCAAGTTCGGTAAAAGTAGTCATGTATCAAATTTAAAGCCAACAGCACAAGAATTTTACCCTGGAAATTCCAATAGTGGAGTAAAACGATTTCAAGAAAAAAAGCCCCATTGGAAAGATAGAAATCCGAGATATAATACTAATTGGAGATCTTCAAGCTATGAATATGATACAGGACAAGAAACAACTAATTTTGGAAGatcaaataatacaaaatatactgGGAATTATGAAGGCTATGGATATAAAGGGTCTCATAGTAACTCGGACTTCCAtggaaaatatgaaagaaatgaAGAAACATATGGAAATAATAAGACAGTTAATTCTTCACCTGTACACCCTAAATATGAGAGAAATGCAAATGAAAACACTGGTACAGCTAGTAATGGATATAAGCCCAAATTCCAGTATGAAAGAAGAAATGGATATGTAACCAAGTCATTTGGTAGATCTAAGCAAggtgaaaaaaattatcaaaattttaatggTAATGGGTCTTCTGATAAGTTTACAGGTAATTTTAGTGGACGTACAGAATTTTATAATAATGAAGTAAAGAGGAAAGATAAATGGTATGTTAATAACACAAACACAAATGTTTCTACTGCAGGACAGCGAGAAAGACTGATTGAAATGATTAATAGCCGAGTATTAGAATGTATGGTATGCTGTGAAAAAATTAAGAGAATTGACAAAATTTGGTCATGTTTTCAGTGTTATCATATCATTCATATTAATTGTATAATTGCATGGGCAGAATCATCCAAAGTAGAAGAAAATTGGCGATGTCCAGCTTGTCAAAATGTTTATACAGAAGTACCAAATCAATATACATGCTATTGTGGCAAAATTGTAGATCCAAAACTAAACCCTAATATTATTGCTCATGGATGTGACAATATGTGTTTAAGAAAAGGTAAAAATTGTGATCATCGCTGTAGCATTTTATGTCACCCAGGCCCTTGTCCAGAATGCAGTGTTATGGTATCGAAACCATGTGGATGTGGAATGACGCAACAAGTTGTTAAATGTAGCAGTGATGTTAAAATAACTTGCCACTCAAgttgcaataaaattttgaattgtgGTGTCCATAAAtgtttggaaaaatgtcacaCAAGCCCGTGTTCTCCTTGTAAAGAATTTATAATTCAGGAATGTTACTGTGAGAAAACGGGTAGGAAAGTACCATGTGATGCAGAACACTgtggtaaaataaattttatatgtgaAGACACCTGCGGTAAATTATTACCATGTGGAAATCACAAATGTAAAAAGCAGTGCCACCCTGGACCTTGTTCACCTTGTGAAAGTgacattaatataattaaaaattgtttttgtggCAAAACCCCATTAGAATCAAAAAGGACTTCTTGTCTTGATCCTATTCCATGCTGTGATAACAAGTGTAATAAACCTCTAATTTGTGGACCACCTAGTATGCCTCATGTTTGTAAAGAAAAATGTCATGCTGGTAAGTGTCCACCCTGCCCTTTAACAACTGTCATCCGTTGCCGATGTGGACATATGGATAAAGAAATGGCTTGTCAAAAGTTAACCACCAAGGCAGATGATgcaagatgtgaaaaaaaatgcacgAAGAAGCGTCTTTGTGGCAAGCATACATGTAAACAACGGTGTTGTATTGAAATTGAACATGTTTGTCCATTACCCTGTAATCATTTACTTTCCTGTGGACTCCATAAATGTGAGCTTACTTGCCACTCTGGTCGATGTCCCCCTTGCATGGAAACTAGTTTTGAAGAATTATATTGTGAATGCGGTGCAAGTGTTCTATATCCACCAATTCCTTGTGGTACCAAACGTCCTGCATGTAAAAAACTTTGCACTAAGTCCCGTTCATGTGGTCATCCTGTAAACCATGAATGTCATCCAGGACCGTGCCCCCCTTGTTTTATATTATCTAAACAGTGGTGCTATGGAAATCATGAGCAACGAGCAGCAATTCCTTGTCATCAAAATAGTTTTAGTTGTGGTCTACCATGTGGCCAGCCAATGCCTTGCGGGCGCCACACATGCATAAAATCATGTCATGATGATAGTTGTCCTCTTCCATGTACTCAGCCATGTACTGTGCCCAGAGTACTATGTGGACATCCATGTAATAAGCCTTGCCACAATCCTCCTTGCCCAGATAGTACTTGTAAGCAAATGGTGCCTGTTACTTGTCCATGTGGCCTGCAGAAAAGTAGTAAAATATGCATGGACTTGACAGAAGAGTTTAGAAACCTTGAAATGGCTCAGCTTAAAGACAAATTGGGAAATTTATCACTTAATACAAGTTTTGATGTTACTGATATAATGGTGAAAAAGCcatctgttttaaaaattttggaatgtAATGATGAATgcaaaattttagaaagaaatagaagACTTGCTATTGGTCTACAAATCCAAAATCCTGATTTAAGTCAAAAATTAACCCCAAGatattcagattttttaaaacaatgggCCAAGAAAGATAGTAAGTTTTGCCAGAGGATTCATGATAAACTAAGTGAACTGGTGCAACTGGCAAAGCAAAGTAAACAAAAAAGTCGTTCCTATTCATTTGAGTCAATGAATCGAGATAAACGCACTTTCATTCATGAATATTGTGAATATTTTGGAGTAGAAAGTGCAGCTTACGATGCGGAACCAAACAGAAATGTTGTTGCTACTGCTATTAGAGATAAATCCTGGTTACCCAGTATGAGTTTGTTAGAAGTACTGCAAAGAGAGAATGGACAAAGAAAAGTTCCAGGTCCAGTTTTGGGTTATGGTACCACTGGTGAATCTGAAGCAGTTTCTTTAAAAGTACTCACAAGTGCCCAAAAAATGTGA
- Protein Sequence
- MSNYFNSSEQFHEVHSTSTREMESSSDNILPGIQSNLQPTAPEYYPLNTNQGAIRKKHLRQHQDFRGGNAKSKFGKSSHVSNLKPTAQEFYPGNSNSGVKRFQEKKPHWKDRNPRYNTNWRSSSYEYDTGQETTNFGRSNNTKYTGNYEGYGYKGSHSNSDFHGKYERNEETYGNNKTVNSSPVHPKYERNANENTGTASNGYKPKFQYERRNGYVTKSFGRSKQGEKNYQNFNGNGSSDKFTGNFSGRTEFYNNEVKRKDKWYVNNTNTNVSTAGQRERLIEMINSRVLECMVCCEKIKRIDKIWSCFQCYHIIHINCIIAWAESSKVEENWRCPACQNVYTEVPNQYTCYCGKIVDPKLNPNIIAHGCDNMCLRKGKNCDHRCSILCHPGPCPECSVMVSKPCGCGMTQQVVKCSSDVKITCHSSCNKILNCGVHKCLEKCHTSPCSPCKEFIIQECYCEKTGRKVPCDAEHCGKINFICEDTCGKLLPCGNHKCKKQCHPGPCSPCESDINIIKNCFCGKTPLESKRTSCLDPIPCCDNKCNKPLICGPPSMPHVCKEKCHAGKCPPCPLTTVIRCRCGHMDKEMACQKLTTKADDARCEKKCTKKRLCGKHTCKQRCCIEIEHVCPLPCNHLLSCGLHKCELTCHSGRCPPCMETSFEELYCECGASVLYPPIPCGTKRPACKKLCTKSRSCGHPVNHECHPGPCPPCFILSKQWCYGNHEQRAAIPCHQNSFSCGLPCGQPMPCGRHTCIKSCHDDSCPLPCTQPCTVPRVLCGHPCNKPCHNPPCPDSTCKQMVPVTCPCGLQKSSKICMDLTEEFRNLEMAQLKDKLGNLSLNTSFDVTDIMVKKPSVLKILECNDECKILERNRRLAIGLQIQNPDLSQKLTPRYSDFLKQWAKKDSKFCQRIHDKLSELVQLAKQSKQKSRSYSFESMNRDKRTFIHEYCEYFGVESAAYDAEPNRNVVATAIRDKSWLPSMSLLEVLQRENGQRKVPGPVLGYGTTGESEAVSLKVLTSAQKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -