Dabb008249.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- GATA-B
- Assembly
- GCA_034092305.1
- Location
- JASJET010000028.1:8956188-8979096[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-18 1.7e-14 54.8 2.7 1 34 36 68 36 70 0.97 2 2 1.1e-18 1.4e-14 55.1 6.9 1 35 90 123 90 124 0.97
Sequence Information
- Coding Sequence
- ATGATTTTACCTGTTTCCGTTCGAGACAATACCGATTTGTGTGTATTACCTTTTGTAAATAAAGttGCTCCAGGAACCGCCGAGTACTTCACAGAAGGTAGGGAGTGCGTGAATTGCGGAGCCATCGACACACCTTTATGGCGCAGAGATGGCACCGGCCACTACCTGTGCAACGCTTGTGGTCTTTATCACAAAATGAATGGCATGAACCGGCCGCTGGTGAAGCAGCCTCGTAGATtgTCGGCATCTCGTAGAGCAGGTCTCACATGTACGAATTGTACTACTACACAAACTTCATTATGGAGAAGGAACACCCATGGTGAGCCTGTATGCAATGCGTGCGGTCTTTACTATAAATTGCATTCTGTTAATCGGCCTTTGTCAATGAAGAAAGATACTATACAAACAAGAAAGCGAAAACCAAAAGGTAGTAAATCAGGACAATCAAATGGAAATCAAGTTAAAAGAATCAAACTGGAAAATTCTGTCAAAATGGAAACAACAGGCTTAGataatTTCAACATTTCTCACCTTCAACATACCCCCACTAGCCTCATGTATCCCAACCAGACACACCCAAGATTTAGTCCTACGTATTCATCACAGTCGCCCCACAACTTAAGTCAGCCTGACTATTATAACACAATTTTGCATCACACGACTAGCCCTAGTCCACCTTCCAACGCCTCAGATCTCCACTCAGAGTCGCCACATTCTCCACTTCTTGGtcacaataacaataataataacaacaccAAAGTTATTATTAATGGAGAGCATGCCATAGAGAGACCCACAGTTGTTTCTTTGTCATCGTAA
- Protein Sequence
- MILPVSVRDNTDLCVLPFVNKVAPGTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCTTTQTSLWRRNTHGEPVCNACGLYYKLHSVNRPLSMKKDTIQTRKRKPKGSKSGQSNGNQVKRIKLENSVKMETTGLDNFNISHLQHTPTSLMYPNQTHPRFSPTYSSQSPHNLSQPDYYNTILHHTTSPSPPSNASDLHSESPHSPLLGHNNNNNNNTKVIINGEHAIERPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -