Dabb030288.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- -
- Assembly
- GCA_034092305.1
- Location
- JASJET010000118.1:398583-429405[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.081 11 8.3 0.6 1 23 148 170 148 170 0.98 2 21 0.015 2.2 10.5 0.1 3 23 174 194 173 194 0.96 3 21 6.8 9.7e+02 2.2 6.2 3 23 202 223 200 223 0.95 4 21 0.0014 0.19 13.9 2.8 1 23 229 251 229 252 0.96 5 21 0.0029 0.41 12.9 2.3 1 23 258 281 258 281 0.93 6 21 8.4 1.2e+03 1.9 0.3 5 23 296 315 293 315 0.87 7 21 0.0015 0.21 13.8 1.0 1 23 326 348 326 348 0.96 8 21 0.00039 0.056 15.6 0.8 1 23 354 376 354 376 0.98 9 21 8.3e-06 0.0012 20.8 0.2 1 23 382 404 382 404 0.98 10 21 0.00011 0.015 17.3 1.5 1 21 410 430 410 430 0.96 11 21 3.1 4.4e+02 3.3 0.7 3 23 916 937 914 937 0.95 12 21 5.6 8e+02 2.5 4.0 1 23 942 965 942 965 0.93 13 21 0.5 71 5.8 4.1 1 21 991 1011 991 1012 0.94 14 21 0.015 2.1 10.6 1.5 1 23 1106 1129 1106 1129 0.96 15 21 2.7 3.9e+02 3.5 0.2 1 19 1182 1200 1182 1202 0.86 16 21 0.43 61 6.0 1.9 3 22 1863 1882 1861 1886 0.92 17 21 0.061 8.6 8.7 1.6 1 23 1909 1932 1909 1932 0.94 18 21 5.4 7.7e+02 2.5 2.3 1 20 2118 2137 2118 2141 0.91 19 21 0.027 3.9 9.8 1.2 3 23 2417 2438 2415 2438 0.89 20 21 0.0014 0.21 13.8 0.4 1 23 2443 2466 2443 2466 0.92 21 21 8.9 1.3e+03 1.9 0.5 1 20 2493 2512 2493 2514 0.91
Sequence Information
- Coding Sequence
- ATGTCTATACATACTGTACGACCCTGTTTGCGAGTAATTTTCTTTAGatctGAATTTGAACTTTTAAAATTAGAGGCAGGGGTTGAAGTGGAAATACATGAAGACCCCAAAGCGGATGTGGCTTACAAAATAGACgatataattctaaaaaatagaCAGATAGTCGAAAACTATAGAAGAGAGCAAGCCAGATTGAAAGAAGAAcgaattaaagaaaaacttatgtTACGAAAACAGGCGGTGAAACGAAAAAGATCAGAGATAAAGAAAGCGAAATCATTAGATaagaaaccaaaaatttttattgaagagGATAATTCGTTTTTGTGTACCTTAtgtaataaacaatatttatcgAAAAAACTTTTTGATCTTCACAAGTACTTTCACAAAGTAGAGGCGAAGGAAACTCAACATAAAATAGacagtttgaaaaatgtatatgtaTGCAATTTTTGTGAAGCCGAATGTCCAACTACTGAAAAACTGACCAGTCATATCGAATCTCATAAGGAAAACTGTAAAGAGTGCGAAACGACCTTTGCAAATGCTTTTACTTTAGGCATTCATATGGCCGAGCATGataaagacgaaaaaatttgttGTCCTTTCTGTGATTATAGAGGAACACTGTCTCATTGTTTAAAGACTCATCTCCTTACCAGAcacttcaaattaaaaatattcagatGTGAGAGTTGTGGTGCTAATTATAGCTCAAAGGTCCATTTAGAGGAACACATCCGGTTCCATCACGATAAAATGGAACCGCATATCTGCGTTGTATgtgaaagaaaatttatattcaaaAGCAGTCTTAAAAAACATCAGATTAACACTCACCGGCCTTTGATCGATGGCGACATACCTTCAAACTATTGTATTTTATGCAAAAGAACGTTAAATACTGTAGAAGCACTAAAAAAACACGTGGAAGAAAAGCATACCAAGGAGAAACCCAAGAACACTGAAAGGTTTATCTGTGATATTTGTGGAAAAGATTTTTCCCATCGGCAGTCTTGGTTACTCCATACTAAAGGCCACAGTGGATTGAAACCATACAAATGCAAACTGTGTTCTAAAGCCTTCAAAGTACAAGCTTTTCTTACGGTTCACGAAAAAATACACTCAGATGAGAAGCCTTTTTCATGTGAAGTTTGTGGTGCTGGATTTAAGCGAAAAGAGGGCCTAAGAAGACATTTATTAACCCATACGGATATAAAGCCTTTTTCGTGTCCAAATTGTTCAAAGGCTTTCCGAAGGAGAGAGCATTTAAGGCTACATTTAAAATGTTGCAATAAGAAACATGAATATCTTTTAGGCATGCCAAACGATTCATCCGACTGGTATTCTCAGAAAAATACAAGTATACCTGAAGATAGCGCATgttcattttgttatttttgtggcAGAGAGTTTGGCATTTCTCAATTTGACTCACACCAGTGCCTCCAAATAGATTTTCTTCTTCCAAGTGAAACATTTGATGATATAACAATCGAAAATATTGAACCAACAGTAAAAGAAGAAAATGAATCAAGTGATGAATCATGTCAAAATTTAAGTCAAGAAACTTCAAACATTTTGGATGAACTGTCGTTAGCTGTAATGAaaattacagaagaaaaaaatgattcttTACACAAAAACAATTCACCAACAGTTGACTTACTTTTAACTAATAAACCTAGGAAATCATCAATTCTATATTCATTATCAACAAAGAAAACTAATAACAAGGATAATTTAGCTCATGAGGCTTCAAGTTCATCTACTCTTGATTCAGTTGACAATGTTCAATCAAATAAGGCTAATAATACAGAATTACCTCATAATAATCATTCTAAATGTTATCAAAGAGGTGGACCTGAAACCTATAGAGAAAAAAAGAATGGAAAAGATCTTCCAAATGATACATCTGATaataaaacaatcgaaaataTTGAACCAACAGTTgacaatataaaagaaaatatatcaaatgATGAAACTGAAAATATAATGGATCAATCATGCCAAAATTTAAATCAAGAAACTTCAAACCATTTGGACGGACAGTCATTAGATATAGTGAAGATTACAGCAGAAAAAAATGATTCTTTGCACAAAACTAATTCATcaacaattgacttagttttaacACATGCTCAAACTAATAAACTTAGAAAATCATCAACTCTATATTCATTATCAACAAAGAAAGCTAATAACAAGGATAATTTAGTTCATCAGGCTTCAAGTTCATCTACTCTTGATTCAGTTGACAATTTTCAGTCAAATAAGGCTAATAATACAGAATTACTTAATAATGATTATTCTAAATGTTCTCAAAGAGATGGATCTGAAGCCTATATTGAACAAAGGAATGGAAAAGGAAAAGATAGAATAGATCTTCATCCCCAAAATGAAACGGCTGATGATAAAACGATCGAAAATATTGAACCAATAGTtgacaagataaaagaaaaaaatgaatcaAATAATGAAACTCAAAATATAATTGCTCAGTCATCTCAGAATTTAAATCAAGAGACTTCAAACAATTTGGACGAACACTCGTTACCTGTAGTGAAGATTACAGATTCTAAATGTTCTCAAAGAGGTGGACCTGAAACCTATGTTGAAAAAAGGAATGAAAAAGGAAAAGATAGTATAAATGATGCTGGGACATTTTTGAATGTTGGCAAAACATTGGCCCAGGAAATCACTCGCTTTCAGGAAACACCATTACCAAAAGCAACGTTCTGTGAGTTCTGTGGTTGGCCAGCTTCGAGTCTTCAAGATCTAAAATGTCATCAGCTTACTGATCATGACAGGGACCACTTCTTATGTTTTATTTGTGATAGGATTTTTAATGATACCTGTGGACTGATGTGTCATTATAAAACAGCACACACCGCAAGCACTCTTAGAAACGCTGAATCAGATCCTTTTCATTGTTCAACTAGAGATTTTGGAGGCAACTTTAGGTACCATTGTAGTCAATGTGGTCATGGCTTTGATCGTATTCATAAGCTTTTCAATCACAAAAAGGAACTAATTAAATTAGGCCACCATTTTCTTGAAGAAGGATTGAAATCTATtgattttgattctaaaaatgAAAACAAGAAGAGCAGTTTTGATAATATACAGATGAGAAAGAGAATGGTACACGCaagtgaaaaagaaaataatgatgtTATTCATTATGTTGATCTAAACGAGACGATAAATGCAACTCCGCAAATATCTATATCATCCAAAAATAATGAACCAAAGACTTCTGATAAGAATAGTTCAGAATGCCAGGCCACCAGTAGttttcaggaAATATTTTTCTGCGAGTTCTGTGGACGAAAAACTTCAAAACCCGAAGAGTTAAGTTTGCATCACCTTACAATTCATGCCAACGACAACTTCTTCTGTattatttgtaaagaaatttttaacGATACGTGTGAACTTATATTCCATTATCACATGAAACATTCTGAGAGCGACCTTAAACAAACTGAATTGGATTTCGTGAATACTACAACAGGTGCTGAAAATAAATTCAGATATTACTGCAGCCAATGCGGTGAAGATTTTGGTCTTATTCATTTGCTTCTTAGTCACAAAGAAGAATTAATCAAATTGGGTCGTCATTTCCTTGAAGATGGATTAAAACGTGTTGATGTTGATTCaggaaataaatcagaaaaaatagcttcattaaaaaagaaaaatatatgcaacaactcAAAGCGGAAAAAGAGAGGAAAGTATGATAttaagaattttataaaaaaagtaaaaattgataataaagctacaaaaaagagattaaaaaataaatattctataaaagaaaaacaaacgcAGAGTAGAAGAAAAATATCTAAAGTATTACCACCAGTTAGTGATAAGCCGTTGGACATTGCTACTCAGAGTCAAGATAATCGAGGCAAAACTAGTGAAAATGCTCTTAAAGGAAATTATATCAGCAAGAGTTATAAAGCTTTAAAATTCAGCAAGGAAAGATttattaaaactaacaaaattctAGGGAAACAAATCCGTATCCACCTacctgaaaataaaacaaataaaactaattGTCCCactgaaaaagaagaaaaagaaaatattatagtaAATAAACTCCAGCGAAATGATCAAGGAACTACAAATCAAAGACAAACAGAAGAAAACAAATTCGAAGAAAATGTTGCAAAATTTGTCGATCAAACCACACAAcagtatcttaaaaataaaaataaacgaaaacaaatttacagaagattcagttctcaaaatgaaaaggcaacaAATGGAGGAAAATTACAAAAAGGTACTTTCCCTGCACAGGGAAATAATACAGTTATTAAAGCTCAAAACCAAGTGGgttcaaaaattgaaattgatACTAAACAAGAGGTTGATATAGAACAAGTCACTGTTATCACTAACAGTTTGAACGAGGACGATGGCATATTGGTAATGAATTTTATTGATGAGGTAGAAAATTTGGGAGATGAACCAGCTGAAAAAGTACAAGATGATCCAGAACATGCATATAAAGATCAGAAGACTACAGATGAAAGTGTTAACATCAAACCTTATTCTCTGTTCTTAAAGAAAACTAACTTAGACATTGGAAATAAGACAACCAGTAGAAAGGGCAGACCGATTAAGAAGAGTAGTcacgaaacaaaaatatacacaGGTATAAAACAATCTAGGAGTAATAAACAAGATAATGATATTAGTGATATTAAGAGAATAGAAGCTCTCTTAAAAATAACacaatcaaaagagaaaaaaattcaagacactttaaaattagataatataaaaaatattgcaagTAAAgtaagtcataaaaaaattagtgaTAAAACCAAAAAGACTGATGGCACAAACAAAATTAGTAATAAGGGCTACATTGATAAAACCAAAGATCCTTTAAAAATTTCAGAGAAAAAAAATACAGATCGCGATAGATTTAACATTAAAACTAATACCGCATttcaagcaaaaaagaaaattcaagaatTAATTACTGATGACAAAAAGATCGACATCGTTGAAAAACGAAAAGAATTACCACAAAAAGCCAAGAAAAGAATGACATTGGAACAATATAAGCAAAAGCGGCAATTGAGCTCTGACAATAGTGGAACTAGTCAAAGAACTACAGAAATAAATGACTCAAAGTTGCTTCCAGGAACTTCAGAAAATGTTACAAATAACTTTACTTCTTCAAGCGGATCAATCCAACCACTTTCTTGTATTCACGCTGCTGAAAGTGTGAGTGAGGTGTGTTCAGATACCAAACTTCTGCCTGAACAACAAGATTCTGCCAATTCTGTTATCAACATATCTAGGCCCCAGATAAGCAAGCAAGACATGGAAATTATAAACCAAGTAGCTCAGACCTTAAAGATATTCAATATGAGTAAAAAAGTTTCCGATGACGCACAGTTTTCTGACGATCCGGAATCTGAGTCCTCTCAAGAAATGGCAACACTAGTTTTCTGTGAAGCTTGTGGTTGTCCAAATCAAAACAACGATAGCCTGAACGAACACATGAAACTTATGCATCCAGGCTTTcatattatttgttttgtttgcaatCGCCATTTTCACACTTTGGACGATGTAATTAATCATCAGAAAAAATACGCAAAACATATGGTAATGGCAGCTGAAaagcaatttttaaaactaagaaaGAGTGTGCCTAATATGTTGTATCCATATTATTGCAACCATTGTGGAAAAGGATATACTTTGATTGATTCAGTTGCCACTCACAAAAAAAACAACCATTCCAAACAGGttaacaagaataaaaaatcttcaAACGCTAAAAAGgcacctaataaaaaaaataattctgtatTAAATCAGTTAGTCAGCGAAAATACATATGAGGAAAGTTATAACTCTATCTTAACTCCGACTGATATTCGAAATGAGGAAGAACTTGAACTTTCTATTGATAAACAGGATAATAATGACCTTATTCCAGAAAGCTTAAAACAAACAGACAGTCAAAATCAAAAAGATGGTCACATTCAACGTCAAGAAACTAATGATTATGAACAAATTGATTCTGATACAGACAGcTCCCTCAGTGGCATTGTTACAACTTCTAAAGACGATAAATCAGATCCAAACTATCCTCGATTTTGTGAATCCTGCGGACAAAAATACAACAACAAAGTAGACGAGCAAAGAGATCTACATCTGGAAAAATTTAAGTGCGCAATTTGTCGAATTCCTCATGAAACAATTGATCTTTTGGTTGCCCATTATGACACTCAGCATTCCCAACAGGAAGTGGCCAATTTTGAATTTGCACAAATATCAATCAAGGaaaattattattgtaaattttgtGGTCTAGGTTTTGATTTTATTGCTAAATTGCTCGAtcataaaaaatgtatacatTATAACCTAATACAAATAGAAAAAGGTAATTTGGAAATTACTGGAACGAATGAAAAAATTTCTGGAAAAAGTAACAGTGAGAATGATTATTCCAAAGATCAAATTGAGGTAACTTTAAATAAGCCTTTAAATCTACCGGCATTGAACAAAGAAAAGGATTCTTTTTggaatatcccgaatataagtgaTAATAAATCCTTAAACAATTCTGGAATATTATCGAACAAAATATTTGATGTAAATGTTCAATCTTTCTCTAAAGTTAATACTTCAGACAGTCAAATTAATTCTAATTCTAAAAACGATAAAGATTTGACAGATCTAATAGAATTATCCGATATTTCTGACACTTCAATTAGTGTTTTCTGTTCAGACACAGAATcacctaaaaaaaataatccagAAGAGAAAACGGATAATTCGgcagatattttaattttgccaGCTAATTCTAGTCACGAGACAATTTCAAGGGATGAGATCATAGATTTGGAAACTACTGAAGCATCAGAGGATGAGGATATGTCAAATTTCGTCGATGTTGAAGAATTTCTTAAAGAAAAAGGAATGAAAAACTTGCCGGAAAAAGacgaaaattattttgaaaaaccgATTGGCTGTAACACAGTTAATTCTATTAGTAATTTGGCCGACCTTGGGAAAGAGAAGCAGGATGAAATAACTAAACAAAAAGCTGAAGAAGTGTCTTTAATACCGGACGATACTCTTTTAAAACATTTCCACCAAGGTGTAACTGAagcATCCTCAACTTCCCAGGTTTCTTCAAAAAAAACTGATGGTCTGAAAGACACAGCATTTATTTTCTGTGAAGTTTGTGGCAAAAAATGTGAAAATCAAGATGCTCTTAATCTTCATTCCACCAATACCCACAATGCAAAACATTTTAGATGTTCAGTTTGTTACCAAATGTTCGAAAACATTTCCAACTTGATTAAGCATCAAGGTTTAGAGCATAATAAGGCTACCCTTGCGTATGCCGAAAGTTATTCATTGAAGTTATTATTATCAAAAGAGGTGCCTGGATATTTTAGATACCACTGTAGTCTTTGTGGAGACGGTTTTAATGATATCAGTAAAATTAAGACCCATAAGGATTCCAGCAACCAAATATGCCAAActataaataatgatattttagaGTCATGCAATAAAGAAAATGAAGATAAAGAAATTACCAGTGAAATAGATGTCTcagataaaaataattctaaaattctCAAGCCTAATCAAATACACAGCGATTCTTCTTCGGAAAATGTAATTACGCCTACTAATACACAAGACGACGAGAATATTAACAGACTGAATGCACCGATAGTACATAATTAG
- Protein Sequence
- MSIHTVRPCLRVIFFRSEFELLKLEAGVEVEIHEDPKADVAYKIDDIILKNRQIVENYRREQARLKEERIKEKLMLRKQAVKRKRSEIKKAKSLDKKPKIFIEEDNSFLCTLCNKQYLSKKLFDLHKYFHKVEAKETQHKIDSLKNVYVCNFCEAECPTTEKLTSHIESHKENCKECETTFANAFTLGIHMAEHDKDEKICCPFCDYRGTLSHCLKTHLLTRHFKLKIFRCESCGANYSSKVHLEEHIRFHHDKMEPHICVVCERKFIFKSSLKKHQINTHRPLIDGDIPSNYCILCKRTLNTVEALKKHVEEKHTKEKPKNTERFICDICGKDFSHRQSWLLHTKGHSGLKPYKCKLCSKAFKVQAFLTVHEKIHSDEKPFSCEVCGAGFKRKEGLRRHLLTHTDIKPFSCPNCSKAFRRREHLRLHLKCCNKKHEYLLGMPNDSSDWYSQKNTSIPEDSACSFCYFCGREFGISQFDSHQCLQIDFLLPSETFDDITIENIEPTVKEENESSDESCQNLSQETSNILDELSLAVMKITEEKNDSLHKNNSPTVDLLLTNKPRKSSILYSLSTKKTNNKDNLAHEASSSSTLDSVDNVQSNKANNTELPHNNHSKCYQRGGPETYREKKNGKDLPNDTSDNKTIENIEPTVDNIKENISNDETENIMDQSCQNLNQETSNHLDGQSLDIVKITAEKNDSLHKTNSSTIDLVLTHAQTNKLRKSSTLYSLSTKKANNKDNLVHQASSSSTLDSVDNFQSNKANNTELLNNDYSKCSQRDGSEAYIEQRNGKGKDRIDLHPQNETADDKTIENIEPIVDKIKEKNESNNETQNIIAQSSQNLNQETSNNLDEHSLPVVKITDSKCSQRGGPETYVEKRNEKGKDSINDAGTFLNVGKTLAQEITRFQETPLPKATFCEFCGWPASSLQDLKCHQLTDHDRDHFLCFICDRIFNDTCGLMCHYKTAHTASTLRNAESDPFHCSTRDFGGNFRYHCSQCGHGFDRIHKLFNHKKELIKLGHHFLEEGLKSIDFDSKNENKKSSFDNIQMRKRMVHASEKENNDVIHYVDLNETINATPQISISSKNNEPKTSDKNSSECQATSSFQEIFFCEFCGRKTSKPEELSLHHLTIHANDNFFCIICKEIFNDTCELIFHYHMKHSESDLKQTELDFVNTTTGAENKFRYYCSQCGEDFGLIHLLLSHKEELIKLGRHFLEDGLKRVDVDSGNKSEKIASLKKKNICNNSKRKKRGKYDIKNFIKKVKIDNKATKKRLKNKYSIKEKQTQSRRKISKVLPPVSDKPLDIATQSQDNRGKTSENALKGNYISKSYKALKFSKERFIKTNKILGKQIRIHLPENKTNKTNCPTEKEEKENIIVNKLQRNDQGTTNQRQTEENKFEENVAKFVDQTTQQYLKNKNKRKQIYRRFSSQNEKATNGGKLQKGTFPAQGNNTVIKAQNQVGSKIEIDTKQEVDIEQVTVITNSLNEDDGILVMNFIDEVENLGDEPAEKVQDDPEHAYKDQKTTDESVNIKPYSLFLKKTNLDIGNKTTSRKGRPIKKSSHETKIYTGIKQSRSNKQDNDISDIKRIEALLKITQSKEKKIQDTLKLDNIKNIASKVSHKKISDKTKKTDGTNKISNKGYIDKTKDPLKISEKKNTDRDRFNIKTNTAFQAKKKIQELITDDKKIDIVEKRKELPQKAKKRMTLEQYKQKRQLSSDNSGTSQRTTEINDSKLLPGTSENVTNNFTSSSGSIQPLSCIHAAESVSEVCSDTKLLPEQQDSANSVINISRPQISKQDMEIINQVAQTLKIFNMSKKVSDDAQFSDDPESESSQEMATLVFCEACGCPNQNNDSLNEHMKLMHPGFHIICFVCNRHFHTLDDVINHQKKYAKHMVMAAEKQFLKLRKSVPNMLYPYYCNHCGKGYTLIDSVATHKKNNHSKQVNKNKKSSNAKKAPNKKNNSVLNQLVSENTYEESYNSILTPTDIRNEEELELSIDKQDNNDLIPESLKQTDSQNQKDGHIQRQETNDYEQIDSDTDSSLSGIVTTSKDDKSDPNYPRFCESCGQKYNNKVDEQRDLHLEKFKCAICRIPHETIDLLVAHYDTQHSQQEVANFEFAQISIKENYYCKFCGLGFDFIAKLLDHKKCIHYNLIQIEKGNLEITGTNEKISGKSNSENDYSKDQIEVTLNKPLNLPALNKEKDSFWNIPNISDNKSLNNSGILSNKIFDVNVQSFSKVNTSDSQINSNSKNDKDLTDLIELSDISDTSISVFCSDTESPKKNNPEEKTDNSADILILPANSSHETISRDEIIDLETTEASEDEDMSNFVDVEEFLKEKGMKNLPEKDENYFEKPIGCNTVNSISNLADLGKEKQDEITKQKAEEVSLIPDDTLLKHFHQGVTEASSTSQVSSKKTDGLKDTAFIFCEVCGKKCENQDALNLHSTNTHNAKHFRCSVCYQMFENISNLIKHQGLEHNKATLAYAESYSLKLLLSKEVPGYFRYHCSLCGDGFNDISKIKTHKDSSNQICQTINNDILESCNKENEDKEITSEIDVSDKNNSKILKPNQIHSDSSSENVITPTNTQDDENINRLNAPIVHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -