Basic Information

Insect: Diaprepes abbreviatus
Gene Symbol: -
Assembly: GCA_034092305.1
Location: JASJET010000147.1:2694973-2697880[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.19 27 7.1 5.2 1 23 379 400 379 400 0.97

2 12 2.6 3.7e+02 3.5 1.5 1 23 438 459 438 459 0.82

3 12 0.027 3.8 9.8 1.5 1 23 465 488 465 488 0.96

4 12 0.16 23 7.4 4.6 1 23 494 516 494 516 0.90

5 12 9e-07 0.00013 23.9 4.8 1 23 524 546 524 546 0.96

6 12 2.3 3.3e+02 3.7 2.6 2 19 564 581 563 584 0.91

7 12 0.22 32 6.9 6.6 2 21 586 605 585 606 0.91

8 12 0.4 57 6.1 0.1 2 19 613 630 612 631 0.93

9 12 2.4 3.4e+02 3.7 1.8 1 23 632 657 632 657 0.90

10 12 0.00021 0.03 16.4 0.9 1 23 667 690 667 690 0.94

11 12 2.6e-06 0.00038 22.4 1.0 1 23 696 718 696 718 0.98

12 12 0.00031 0.044 15.9 1.8 1 23 724 746 724 746 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.19	27	7.1	5.2	1	23	379	400	379	400	0.97
2	12	2.6	3.7e+02	3.5	1.5	1	23	438	459	438	459	0.82
3	12	0.027	3.8	9.8	1.5	1	23	465	488	465	488	0.96
4	12	0.16	23	7.4	4.6	1	23	494	516	494	516	0.90
5	12	9e-07	0.00013	23.9	4.8	1	23	524	546	524	546	0.96
6	12	2.3	3.3e+02	3.7	2.6	2	19	564	581	563	584	0.91
7	12	0.22	32	6.9	6.6	2	21	586	605	585	606	0.91
8	12	0.4	57	6.1	0.1	2	19	613	630	612	631	0.93
9	12	2.4	3.4e+02	3.7	1.8	1	23	632	657	632	657	0.90
10	12	0.00021	0.03	16.4	0.9	1	23	667	690	667	690	0.94
11	12	2.6e-06	0.00038	22.4	1.0	1	23	696	718	696	718	0.98
12	12	0.00031	0.044	15.9	1.8	1	23	724	746	724	746	0.97

Sequence Information

Coding Sequence: ATGGTTGTACGTTGTGCGGTATCAAAATGTACAATGACAACTGATCAagcacaaaataaaaatttaaatataacatttcaTCGTTTTCCAAAAGATGAAACTTTTCAGCTAGAATGGGTAAAAAGATGTGGACGGCAAGTAAACGCTAGTACCGCTCGTTTGTGCagtttacattttcaaaaacgtGATTTTGATAAATCTCGCGATTTCCGAAACAAGCTTATGGGCACAAAAATTCAGCGACTTCTCAAAAAAACAGCCATTCCTACCATTAATATCCATGaagaaatacttctagaaaaacAAATAACTAATTACACGACACCAAAAAAACTATTAAGTTATAGTATAGACAACAAGTTACATAATTCGATCAATTACAATAAAAACCTTGTTGAAGATACTATTCAGAGGAAAACGGTTGAATGTTTAAGTGATATTACAGTTTCACCAGAAGCAACTGCTTCAAGAAACACtggatgtataaaaaaattatttcttgaagaaatcactaaactttgTAGATTGTGTTTAGAAGAAAAACCTACTATGTGGTCTTTTTTTTCCTTAGTTACATTTGATAATGGTAATATTATCGATGTTTCACAAGCTTTTCAGACTTTAACAAGAGAAGAAACAGATAAAatGGAAAATCCATACTTACCTTCTTATATTTGTGAGCACTGTTTGGATTTATTAACAAGTGCAAGTACATTTCAACAAAAGTATGAGCaatctgcaaaaattttaaatgattatttatCAAGAAATAGTATTAAAGATGTAAATATTCCTATAGATGAGCAAGATATAAGGAAAGGtggtaaagcaataaaaaatgcaGATGAAACTATAACACCAATGTTTGAATTTATATCAACAGAGGAAGATAATATTACTCACATTAATACATTACCAGAAACTCAATTTAAAGTAGTAGAACCCAAAAAATATTCTGTTACCCATGAGTCATTATCAAGTATgaatgaaatagaaaatataaatgatGTAATAGCAACATGTATAACTGAAGAAGATGACACTGCATCAAGAGGTGCTGAAGAAATCTATACTTCAACAATTGCTGAAGAAACTATTACTTTAGCTGTCacaaaagatattccaataaaatTACACCGTTGTCCAATATGTCCTCATGAGTTCACTGCCttagaattaaaaaaacattGTCGTACCCACAACTCATTTAGGACATATCTCAAATCAGCTCCAAAGTAtaggaaaaaagtaaaattttatgctAAACCTAGAACAGACAACAAAGGATTGTTTAACCAGGAGAAAATTGTTCATACTTGTCCATTTTGTCAAGAAGAGTTTGAAAGTTTACCGTTCAGAGATCATATAAAACAACACCGTACCGAGGGCAACTTTAGGTGTAATATTTGTAATCGAATTTTCTTaggaataaatcatttaaaaatacatCAGTTAAGGAGTCATAAAAAGGAGGCTCCTTTTAAgtgtaaattttgtgataaatccTTTTTTGTTAGAAAAAATTATGATTTCCATCTTTTAAAACATTCCGATGATAATGAACTTccttttaaatgtaattattgtCCTAAAACATTCTCAAATCCAGAACATTTAAAGAGGCATAGGTTTAATCATGAAAATGATGTGGCCTATCATATTTTCTATAAGAGagaaaaaatatatgtcaaatgTAAACAGTGCTTGCAACGGTTTAAGACTGAGGAAGAAAAAAAAGCTCATAATTGCAGATTATGTTGTGCCAAATGTCATAAGATATTTGATAGTAAAAGCAAATTTAATTCCCACGTTTGTAAAAGTAAACTTAAGAGATCTCAGTGTCCACCTTGTGGTAAAGTATTTCTTCTTCCTAGTTCTTTAAAAACTCACAAATTCAGATGTAAAACTAGTACACTGTGCTATGTTTGTggaaaaaatgttgtaaatattaCTCAGCATATGTTAACTCACTATCCAAATAGAAGAGGAAAGTCGGTATTTAAATGTGCACAGTGCGAGAAACAATTTAGTTTAAAGCAGTATTTAAAAAGACACATCGCAGAAGTACATTTGAATATTGTTCACTTCCGCTGTCAGTACTGTTCAAAAGGGTTTAAAAGCAAATGGAACTTGGAAGTCCATGAGAGAATACATTTAGGTGTTAAAGCCCATGTATGTACTATTTGTGAAAAAGGATTTTTAGAAAAGAGCTACCTAAAGAAACATTTGAGGATCCATATGCGTCAAGAGACTTTTGCAAATCCATGTGAAGTTTAA
Protein Sequence: MVVRCAVSKCTMTTDQAQNKNLNITFHRFPKDETFQLEWVKRCGRQVNASTARLCSLHFQKRDFDKSRDFRNKLMGTKIQRLLKKTAIPTINIHEEILLEKQITNYTTPKKLLSYSIDNKLHNSINYNKNLVEDTIQRKTVECLSDITVSPEATASRNTGCIKKLFLEEITKLCRLCLEEKPTMWSFFSLVTFDNGNIIDVSQAFQTLTREETDKMENPYLPSYICEHCLDLLTSASTFQQKYEQSAKILNDYLSRNSIKDVNIPIDEQDIRKGGKAIKNADETITPMFEFISTEEDNITHINTLPETQFKVVEPKKYSVTHESLSSMNEIENINDVIATCITEEDDTASRGAEEIYTSTIAEETITLAVTKDIPIKLHRCPICPHEFTALELKKHCRTHNSFRTYLKSAPKYRKKVKFYAKPRTDNKGLFNQEKIVHTCPFCQEEFESLPFRDHIKQHRTEGNFRCNICNRIFLGINHLKIHQLRSHKKEAPFKCKFCDKSFFVRKNYDFHLLKHSDDNELPFKCNYCPKTFSNPEHLKRHRFNHENDVAYHIFYKREKIYVKCKQCLQRFKTEEEKKAHNCRLCCAKCHKIFDSKSKFNSHVCKSKLKRSQCPPCGKVFLLPSSLKTHKFRCKTSTLCYVCGKNVVNITQHMLTHYPNRRGKSVFKCAQCEKQFSLKQYLKRHIAEVHLNIVHFRCQYCSKGFKSKWNLEVHERIHLGVKAHVCTICEKGFLEKSYLKKHLRIHMRQETFANPCEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00444185;
90% Identity: iTF_00444185;
80% Identity: iTF_00444185;