Basic Information

Insect: Diaprepes abbreviatus
Gene Symbol: ECU06_1150
Assembly: GCA_034092305.1
Location: JASJET010000050.1:9109290-9119938[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.11 15 7.9 0.1 1 23 239 262 239 262 0.95

2 8 0.00022 0.032 16.4 1.7 1 23 339 361 339 361 0.98

3 8 3.4e-05 0.0048 18.9 0.3 1 23 367 390 367 390 0.96

4 8 1.9e-05 0.0027 19.7 0.4 1 23 396 418 396 418 0.97

5 8 1.6e-06 0.00023 23.1 0.9 1 23 424 446 424 446 0.98

6 8 2e-05 0.0028 19.7 2.7 1 23 452 474 452 474 0.98

7 8 2.3e-05 0.0033 19.4 1.7 1 23 480 502 480 502 0.97

8 8 0.00016 0.023 16.8 6.1 1 23 508 531 508 532 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.11	15	7.9	0.1	1	23	239	262	239	262	0.95
2	8	0.00022	0.032	16.4	1.7	1	23	339	361	339	361	0.98
3	8	3.4e-05	0.0048	18.9	0.3	1	23	367	390	367	390	0.96
4	8	1.9e-05	0.0027	19.7	0.4	1	23	396	418	396	418	0.97
5	8	1.6e-06	0.00023	23.1	0.9	1	23	424	446	424	446	0.98
6	8	2e-05	0.0028	19.7	2.7	1	23	452	474	452	474	0.98
7	8	2.3e-05	0.0033	19.4	1.7	1	23	480	502	480	502	0.97
8	8	0.00016	0.023	16.8	6.1	1	23	508	531	508	532	0.96

Sequence Information

Coding Sequence: ATGAGTACTGAAGAGCCACACTTACTTAACCTTTCTGCTGAATTTGCAGAAACAGAGTTTACTGAAATGATAAGTATAAACATAATTTGTCGACTCTGTGCAAATCAAAGCGACAAATTAATAGGCATATACAGTGAAGATGGCATTAATAATGATTTATCAGGGAAAATGAATCTGTATCTACCCATTAAAGTATCAGAGTCAGATAATTTACCACTACAATGCTGTTGGCAGTGTGCTTCTACATTATTAGCATGGCATGATTTAGTTGTATCAAGTGTTGAGGCTGACAGAAGATTTAGGTCTTATCAGTTTGTTACTGAGAAACAGTTAGTGGAGATATCTTATGGTGGAACTGAGAGCTTATTGGCCAACAATACAGATGACAATTTgGCAACCGACGACTCAGTTTCTAAAGAAACTATTCTTTATGAAACTATAAATGAGGCTGACTTATTAAGTGAAGATGTTGCATCAAAAATTGAGgaacatattaacaaaaataaagaaaactctTTAGACACAACAGAAATTGGTAATCAAAGTGCAGGTGCTTATCTTTCGGTGAGAAAAGATATTATTGGAGATCATTCATCGGTAGATAGTAAACTGCTGAGTACAGAAAGCACAGTGCAAGATGAAGACCCTGGTAATACTGAAAAAGAATCCTCCACTAGCGAACCTAGCGATAcagaagaagaaaatatatataattttgaatgcCCATTTTGTCCAACGTTATTTGTTGCCGAAACTGATGTCAGGCAGCATCTAAAAGAGGAACATCCTGATATACTACAAGAAGAAGAGGTATTCTTTGGAAGTAACAGTGTAGAAGAAAGTATTGAGGATGTGTCTAaaggtgaaattaaaaatgaaccagaagaaaagtctaaaaaaaatgCACCTGCTCGTCGAAGTTTTCATGTTAGACATATGATAAAACaacctctaccaaaaattaaTCAGGAAGAGGTAAACAAGGCAAAGGTAGAAGTGGACGGTCGGGTTTTTTATATGTGCAAGGAATGTGGCAAAAGTTTACATTCTATGTACACTTATGTTTGGCACATGAGAATACATACAGGGGAACGACCTTATGTATGTGATTTATGTGGAAAACAATTTAGAGTTTCACAAGGCTTGGTACGGCATTTGAAAGAGACCCAtgaaagaatcaaaaattttgacTGTGATATATGCGGCCGATATTTTGCTACCAAGAGAAACGTTGAAGAACATCGAAGAATCCATACAAATGAACGACCGTATGTGTGTGCAACTTGTGGAAAATCATTTAAGCAAAAAGCTTCATTATTTGTACATAACAGATCACATAGTACCGAGTTTCCATTTACGTGTTCCTACTGTCCTCAAAAGTTTAGGACTAAACAGTCACTGTTGACTCATATAACTCGACATACTGGTGAAAAACCTTTTCCTTGTGATGTTTGTGGACGTCATTTCAGAATAAAATATGAACTGAAAAGACACAAACTCATCCATTCTGAAGATAAACCATTTACATGTAAAATGTGTACTCAAACGTTTAGACAAAAGCGGTATCTTAGaaaccatttaaaattaaatcatcataTAGCGAATCCAAATGAATTGCTAATAGAATATATAAGTGCCATTTAA
Protein Sequence: MSTEEPHLLNLSAEFAETEFTEMISINIICRLCANQSDKLIGIYSEDGINNDLSGKMNLYLPIKVSESDNLPLQCCWQCASTLLAWHDLVVSSVEADRRFRSYQFVTEKQLVEISYGGTESLLANNTDDNLATDDSVSKETILYETINEADLLSEDVASKIEEHINKNKENSLDTTEIGNQSAGAYLSVRKDIIGDHSSVDSKLLSTESTVQDEDPGNTEKESSTSEPSDTEEENIYNFECPFCPTLFVAETDVRQHLKEEHPDILQEEEVFFGSNSVEESIEDVSKGEIKNEPEEKSKKNAPARRSFHVRHMIKQPLPKINQEEVNKAKVEVDGRVFYMCKECGKSLHSMYTYVWHMRIHTGERPYVCDLCGKQFRVSQGLVRHLKETHERIKNFDCDICGRYFATKRNVEEHRRIHTNERPYVCATCGKSFKQKASLFVHNRSHSTEFPFTCSYCPQKFRTKQSLLTHITRHTGEKPFPCDVCGRHFRIKYELKRHKLIHSEDKPFTCKMCTQTFRQKRYLRNHLKLNHHIANPNELLIEYISAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01188657;
90% Identity: -
80% Identity: -