Basic Information

Insect: Diaprepes abbreviatus
Gene Symbol: -
Assembly: GCA_034092305.1
Location: JASJET010000147.1:4486553-4499900[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.32 46 6.4 2.1 2 23 164 186 163 186 0.87

2 9 0.064 9.1 8.6 0.3 1 23 192 215 192 215 0.97

3 9 2.4e-07 3.5e-05 25.7 0.7 1 23 221 243 221 243 0.97

4 9 8.4e-08 1.2e-05 27.1 2.9 1 23 249 271 249 271 0.99

5 9 6.5e-07 9.2e-05 24.3 0.1 1 23 277 299 277 299 0.97

6 9 0.0001 0.015 17.4 5.0 1 23 305 327 305 327 0.98

7 9 1.8e-07 2.5e-05 26.1 0.8 1 23 456 478 456 478 0.98

8 9 2.9e-05 0.0042 19.1 1.8 3 23 486 506 484 506 0.97

9 9 3.2e-07 4.5e-05 25.3 1.5 1 23 512 534 512 534 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.32	46	6.4	2.1	2	23	164	186	163	186	0.87
2	9	0.064	9.1	8.6	0.3	1	23	192	215	192	215	0.97
3	9	2.4e-07	3.5e-05	25.7	0.7	1	23	221	243	221	243	0.97
4	9	8.4e-08	1.2e-05	27.1	2.9	1	23	249	271	249	271	0.99
5	9	6.5e-07	9.2e-05	24.3	0.1	1	23	277	299	277	299	0.97
6	9	0.0001	0.015	17.4	5.0	1	23	305	327	305	327	0.98
7	9	1.8e-07	2.5e-05	26.1	0.8	1	23	456	478	456	478	0.98
8	9	2.9e-05	0.0042	19.1	1.8	3	23	486	506	484	506	0.97
9	9	3.2e-07	4.5e-05	25.3	1.5	1	23	512	534	512	534	0.99

Sequence Information

Coding Sequence: ATGGAAACAAGTGAGCCTTTACCACCGATAAACGATGTTTGGAGAAGTTATGCGACAATTTGCAGATTGTGCTTACAAAAAGATGGATTTATGCTCgggatttttaataatattcaaggaaaagaaaaaagtatttcGAAGAAAATTGTGGATTGCACGGCTTTATCGgtCCACCAAGGAGATGGACTTCCAAATGTGATTTGCCATAGATGCCTATTCAAAATAGAGTTTTGTCTGGAATTTCGGCAACTCTGTTTTATATCTGATGCTACTTTACGTCAGCTGAGTGGCATGTCGAAAGAAAATGGTGAAGAAAACAATAGCAATCAGCCTCATTTACCTTTTTATGAACAATTGGCGAATGGTACGGATGAAAATGTTGTTATGgTGGTTGATCCAAACACTATGGATTATGAATCTGAATATGAATCTGATAATGAAAGACCAAGTGATGCAGAAATTAATGAATTAGATGGCAAGAATGTATCTATGTGTAAATTTTGTGATCATGCATTTACAGATAAGgcTGAATGTACTGAACACGAAGCATCTGCTCATAACTCGGATCGACCATATAATTGTTCAAGTTGTGCTATGAACTTCGCTGATCGTTTACTTTATTCAGCTCACATGAAGAGTGTTCACAAAAATGATAAGCCTTATAATTGTCCTCAGTGTGATAGAACTTTTGCTAGGAGATCTGATTTAAGAAAACATACAATTGTCCATACAGgtGTGAAACCTTACACATGTACAGTCTGCTTCAAATCATTTTCAAGAAACACAAACTTATCGAAACATATGAGAATACATTCTGGAACTAAACCGTTCGTTTGTCCCAACTGTCCGAGAACTTTCACTTCGAGGGGAGATCTGAACAGGCATGCGATGATACATACGGGTCAAAAACCTTTtagATGTAACTACTGCCACCTAACATTCGGAAGGAAAGATAAACTTTTAAGACACGAGAAGCGGCATTGGCCACAACAGAATACCGAAGATAAATCTCAGGAATTGCAAATGATGAGAGACGATTTGGGCATTGAGTATAATTATGGGAATGTCAACAGTGAGAATTATGAAAGACCGGAAGCGGAAGTTGATAAACAGGAAGAAAATATTgtTATAAATTTGGATCCTTTTAATCACAACGAATTCGGAAGTGAGACAAGTTTACGAAGAGGCAGCGCCTCAGAAAATGAACCAAAGGAAAATGACTTACCTGGTATCCCAGATCATATAAAAGATGAATTCAAGgcCGAGGAATCGGTTCTCTATGACCCTTCCCGTGACCACATCACAGGAGAAAGTTTCTCCAGTGACGGACATGACAAATCTGCCACGGACAAAGAAGGAAGACCCTATAAATGCGCAAATTGTCCGAAACGCTTTTCAACACCTGATAATTTAAAATACCATATGGCTAGACACACAGGAATTCGACCGTTTGGTTGCCACATCTGCAACAAATCTTTCATAAGGAAAAGAGAACTGGACAGACACGTGGTCACCCACACTGGTGTCAAACCCTTCAAATGCCCCAAATGTCTTAAAAGTTTCGGCCGAAAGGATAAGCTCGTGAGACACATGAGGATACACGACAGAAGAGACGGTTTCTCGTCTAAAAAACTCATGGGTAGTCCCGAGAAAATtagaaaaccaatttttttacagcaacaacagcaataa
Protein Sequence: METSEPLPPINDVWRSYATICRLCLQKDGFMLGIFNNIQGKEKSISKKIVDCTALSVHQGDGLPNVICHRCLFKIEFCLEFRQLCFISDATLRQLSGMSKENGEENNSNQPHLPFYEQLANGTDENVVMVVDPNTMDYESEYESDNERPSDAEINELDGKNVSMCKFCDHAFTDKAECTEHEASAHNSDRPYNCSSCAMNFADRLLYSAHMKSVHKNDKPYNCPQCDRTFARRSDLRKHTIVHTGVKPYTCTVCFKSFSRNTNLSKHMRIHSGTKPFVCPNCPRTFTSRGDLNRHAMIHTGQKPFRCNYCHLTFGRKDKLLRHEKRHWPQQNTEDKSQELQMMRDDLGIEYNYGNVNSENYERPEAEVDKQEENIVINLDPFNHNEFGSETSLRRGSASENEPKENDLPGIPDHIKDEFKAEESVLYDPSRDHITGESFSSDGHDKSATDKEGRPYKCANCPKRFSTPDNLKYHMARHTGIRPFGCHICNKSFIRKRELDRHVVTHTGVKPFKCPKCLKSFGRKDKLVRHMRIHDRRDGFSSKKLMGSPEKIRKPIFLQQQQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00376549; iTF_01188591; iTF_01352003; iTF_01244458; iTF_00848953; iTF_01307445; iTF_01239390; iTF_00196589; iTF_01241112;
90% Identity: iTF_01244458; iTF_00196589; iTF_01241112; iTF_01239390; iTF_01188591;
80% Identity: -