Basic Information

Insect: Diaprepes abbreviatus
Gene Symbol: CAS5
Assembly: GCA_034092305.1
Location: JASJET010000189.1:1553340-1586050[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.077 11 8.3 2.7 2 23 176 197 175 197 0.96

2 16 2.2e-05 0.0031 19.5 3.8 1 23 202 224 202 224 0.97

3 16 0.00011 0.015 17.4 4.4 1 23 230 252 230 252 0.97

4 16 0.0081 1.1 11.4 2.2 1 20 258 277 258 277 0.96

5 16 3e-05 0.0042 19.1 0.6 1 23 286 308 286 308 0.96

6 16 0.011 1.6 11.0 0.1 1 23 543 566 543 566 0.95

7 16 3.7e-07 5.3e-05 25.1 4.9 1 23 572 594 572 594 0.98

8 16 4.3e-06 0.00061 21.7 3.2 1 23 600 622 600 622 0.98

9 16 0.00023 0.033 16.3 0.1 2 23 629 651 628 651 0.89

10 16 0.00054 0.077 15.1 0.7 1 23 665 687 665 687 0.98

11 16 0.00013 0.018 17.1 4.6 1 23 693 715 693 715 0.98

12 16 3.1e-06 0.00044 22.2 0.5 1 23 722 744 722 744 0.96

13 16 1.9e-05 0.0027 19.7 1.3 1 23 750 772 750 772 0.98

14 16 1e-06 0.00015 23.7 0.8 3 23 780 800 778 800 0.96

15 16 8.7e-06 0.0012 20.8 0.1 1 23 806 828 806 828 0.99

16 16 0.18 25 7.2 0.6 1 23 833 856 833 856 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.077	11	8.3	2.7	2	23	176	197	175	197	0.96
2	16	2.2e-05	0.0031	19.5	3.8	1	23	202	224	202	224	0.97
3	16	0.00011	0.015	17.4	4.4	1	23	230	252	230	252	0.97
4	16	0.0081	1.1	11.4	2.2	1	20	258	277	258	277	0.96
5	16	3e-05	0.0042	19.1	0.6	1	23	286	308	286	308	0.96
6	16	0.011	1.6	11.0	0.1	1	23	543	566	543	566	0.95
7	16	3.7e-07	5.3e-05	25.1	4.9	1	23	572	594	572	594	0.98
8	16	4.3e-06	0.00061	21.7	3.2	1	23	600	622	600	622	0.98
9	16	0.00023	0.033	16.3	0.1	2	23	629	651	628	651	0.89
10	16	0.00054	0.077	15.1	0.7	1	23	665	687	665	687	0.98
11	16	0.00013	0.018	17.1	4.6	1	23	693	715	693	715	0.98
12	16	3.1e-06	0.00044	22.2	0.5	1	23	722	744	722	744	0.96
13	16	1.9e-05	0.0027	19.7	1.3	1	23	750	772	750	772	0.98
14	16	1e-06	0.00015	23.7	0.8	3	23	780	800	778	800	0.96
15	16	8.7e-06	0.0012	20.8	0.1	1	23	806	828	806	828	0.99
16	16	0.18	25	7.2	0.6	1	23	833	856	833	856	0.96

Sequence Information

Coding Sequence: ATGGATGTGGAACGGGTGGACTTATCCCTAATTTGTAGAACATGCAAATGTGTGTCCCCGACCATGAGATCTCTCTTCAGCGGAATGGAAAATGCGAATATTTCTCCACACAATCCCCGTATTGACGAGATGCTAATGGCCTGTGCCGCTGTCCAGGTTTCATATGGTGACGGCTTGCCAACATTGATGTGTGACATGTGCTGTCAAAGCTTAAAAGGTGCTTTCCAGTTTAAGAAGCAATGTGAAACTGTTGATGCCAGTCTTAGAGAATACTGCAAAAACATGAAAGTTAATGCCATTAAGCAAGAGCTACAAAATTCTGAATTTATGGAATCGTTGAATACCTTAAGCAACTTATTGAGCAGCAATTCTGAGACACAGCCTATTAAGGATCATTCAAAAGATGGAACTCCTGTAATTACAATCGATTCTTCTATGTCAGAAGCTATGGAAGAAAACGAAAAACCGAAATTACATCCCGAAACTgattatatacaatttttggaTAACAACCAGATGTTGTTAACGTGTCGGGAATGTGCAAAGATGTTCACCACTTTGGAAGGTTTGAGGTGTCACAAACGGATGCACGCCGGTACTACGTTTAAATGCAAGCAGTGCGACAAAGAATATACTCGCAAAAATCACTTGGAACGTCACGAAGCCTCGCACGGAAAGAGAAAAGTGCACGTTTGCAAAGTGTGCAACAAAACTTTAACGAGAATGGAACATTTAAAACGGCATCTGATCACTCACTTAAGGGAAAAGCCGTTCAATTGCAAGACTTGCAATAGAGGCTTTAATAGAGTTGAACATTTACATAACCATATCCCAAGATGCAAAGGAGAAAATGTTCATATTTGTCCAGTTTGCAATAAAGCCTTTAACCGTGAAGACAGTTTGGAAGTTCATAAACAGCAACACGACAGTGCACAGTTATCACTGCCTACTATTgaaaatttagataatattgaaGAACATTATTTTCAAgTGGATTATGATGCAAATATAACTTTCTCTGACAATTCTGATGTTGAAGACTGTTTCGAGCCTCAAGTGGAGGTGACTGAAAGTGGAGCTGACGCTAAACTGGACATGACAAGTGATGGAGGTGTACATGAAGTAGCAGAAGATAGTAGTAGTCAAGATTCGTTAGgaGATACCAGTAGTAAAAAAACTAGAGATGCAGCAGAAGAAACCAGCGAGTGCATTGAAATCCAACAAGAACAAGACGACGAAGACGAAAAGCCATTAGCTGAACTTGCTGCCATTGTTAAGTCAGAAGAAGCTCCCATAGCATTTAACgtcgataatgatgatgatgaggacGACAATGACAACAATGATAATAACGATAATGATCTTGACATGCCTGCAAACGCGTCGAGTGATTATAACGAATATGATAATTTAGAAAATGATAATGCAAATGATAGTTCGGCTGAAAGCTCCGACGAGGAATATTTACCACAAAAGAATGCCCAGACGACACCTAGTGGTAAACGTCGCAGGGGGAGACCTCGTATTCATCCACCTAAACCCAAAGGACTAGGTCGAAGAGGTAGACCTCCAGGTAGTACAGGAAAAAGAAAACCAAAGATAACTGAGGAAGAGGAAATTGGTGAATTCCCATGTCCGGTCTGTAGCGAATTTTATGACAGGGTTAGTTTGTTGGATAAACATGCCAGAGATGCTCATCCTGGTCTTAAGGTTCACAAATGTAACATTTGTGGCAAAGACTTCAGTCGCCCGAACCATCTGAAGCGCCATATGACGTCCCATTCGGAAGACAAGCCGTTCACTTGCGATGTATGTACGAAGAGTTTCGTCAGGCGCGATCATCTTATGCAACATCAGAAGTTGCACGAACAGCAGGAGGAGATGCCGTGCGATATCTGCGAGAAACCGTTCAACAGAGCCGATCAACTGGCAAAACATAAGGCGGCGAAACATGGAATAGGAGAGAAAATGATTATTATGGGAGAAAAGAAATACCAGTGTGAAATATGTCAGAAAGGTTTCACGACGGAAAAATACCGAGATGTTCATATGAAAGCTCACAGCGGCGAAAAATCATTTCAGTGTAAAGTGTGCGAAAAGACGTTCCTATCAAAATCCCATCTTACGGAGCATATGAAATTCCATAATGAACATTCCAAGAAATTCTTGTGTTCGGAGTGCGGTCAAAGGTTTATCCGTAACGATTATTTAGTAATTCATATGAGAAGGCATCGAGGAGAAAAACCGTTCAAGTGTAAATTCTGTGGAAAAGGTTTCCCAAGAACTACGGATCTTACTGTTCACGAGAGGTATCACACTGgtgaaaaaacacatttatgcACGGTATGCGGTAGAGGTTTCGGAAGAGCCTACAATCTAACTGTACATATGAGAACCCATACGGGAGAGAAACCATACCAGTGCACGTATTGTGATGCTGCCTTTGCCCAGGGTAATGACCTTAAAGCTCATATCAGAAGACATACGGGTGAAAGATTCCAATGTGACTTGTGTACGGAAAGCTTCTTAATGGGATATTTGTTGACCCAGCATAAGCGCTCTGTTCATGGTTTGAATGTAGTGAGCAACATTCGACGACTGCAGCCGATTCACAAAACAGAAAACCCCGACGAACCTCCGCCCATCACGATCCCGTTACCGAAACCCGTTATACCGGAGACGCTAATGTTCAACCATTTACTGCAGCCCACCCACATGGCTCCCTTGCAGGCCAAAGAAGAAAAACCCGACGATCCTCCGTCTCTGTCTATGCCATTTTCAAAACCCGTAATGCCCGAAAACCTTATGTTTAACCATCTGCAGGCGCAGTTGTCTATATCACAAATGCATTTCACTACTCAAAGGCCCGCAACCTAG
Protein Sequence: MDVERVDLSLICRTCKCVSPTMRSLFSGMENANISPHNPRIDEMLMACAAVQVSYGDGLPTLMCDMCCQSLKGAFQFKKQCETVDASLREYCKNMKVNAIKQELQNSEFMESLNTLSNLLSSNSETQPIKDHSKDGTPVITIDSSMSEAMEENEKPKLHPETDYIQFLDNNQMLLTCRECAKMFTTLEGLRCHKRMHAGTTFKCKQCDKEYTRKNHLERHEASHGKRKVHVCKVCNKTLTRMEHLKRHLITHLREKPFNCKTCNRGFNRVEHLHNHIPRCKGENVHICPVCNKAFNREDSLEVHKQQHDSAQLSLPTIENLDNIEEHYFQVDYDANITFSDNSDVEDCFEPQVEVTESGADAKLDMTSDGGVHEVAEDSSSQDSLGDTSSKKTRDAAEETSECIEIQQEQDDEDEKPLAELAAIVKSEEAPIAFNVDNDDDEDDNDNNDNNDNDLDMPANASSDYNEYDNLENDNANDSSAESSDEEYLPQKNAQTTPSGKRRRGRPRIHPPKPKGLGRRGRPPGSTGKRKPKITEEEEIGEFPCPVCSEFYDRVSLLDKHARDAHPGLKVHKCNICGKDFSRPNHLKRHMTSHSEDKPFTCDVCTKSFVRRDHLMQHQKLHEQQEEMPCDICEKPFNRADQLAKHKAAKHGIGEKMIIMGEKKYQCEICQKGFTTEKYRDVHMKAHSGEKSFQCKVCEKTFLSKSHLTEHMKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKFCGKGFPRTTDLTVHERYHTGEKTHLCTVCGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHIRRHTGERFQCDLCTESFLMGYLLTQHKRSVHGLNVVSNIRRLQPIHKTENPDEPPPITIPLPKPVIPETLMFNHLLQPTHMAPLQAKEEKPDDPPSLSMPFSKPVMPENLMFNHLQAQLSISQMHFTTQRPAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01239373;
90% Identity: -
80% Identity: -