Dabb043199.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- -
- Assembly
- GCA_034092305.1
- Location
- JASJET010000194.1:1063363-1070574[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 2e-05 0.0028 19.7 0.7 1 23 20 44 20 44 0.97 2 26 0.13 19 7.6 0.4 1 23 50 75 50 75 0.93 3 26 0.0081 1.2 11.4 4.3 1 23 81 106 81 106 0.96 4 26 0.0038 0.55 12.5 0.2 3 23 114 137 113 137 0.89 5 26 0.013 1.9 10.8 1.2 1 23 160 185 160 185 0.96 6 26 0.00078 0.11 14.6 5.2 1 23 191 215 191 215 0.97 7 26 6.7e-05 0.0095 18.0 0.5 3 23 227 250 226 250 0.91 8 26 0.00064 0.092 14.9 0.7 1 23 255 278 255 278 0.89 9 26 0.00055 0.078 15.1 4.2 1 23 284 306 284 306 0.97 10 26 0.025 3.5 9.9 0.4 5 22 312 329 309 329 0.93 11 26 0.00091 0.13 14.4 0.9 1 23 338 361 338 361 0.94 12 26 0.0013 0.19 13.9 4.7 2 23 371 395 370 395 0.95 13 26 0.0031 0.45 12.7 1.0 2 23 403 427 402 427 0.94 14 26 0.2 28 7.1 0.1 1 17 1602 1620 1602 1621 0.93 15 26 0.035 4.9 9.4 1.6 1 23 1632 1657 1632 1657 0.93 16 26 0.01 1.4 11.1 4.4 1 23 1663 1688 1663 1688 0.96 17 26 0.0066 0.94 11.7 0.5 3 23 1696 1719 1695 1719 0.88 18 26 0.019 2.7 10.3 1.2 1 23 1742 1767 1742 1767 0.96 19 26 0.00039 0.055 15.6 6.0 1 23 1773 1797 1773 1797 0.98 20 26 6.7e-05 0.0095 18.0 0.5 3 23 1809 1832 1808 1832 0.91 21 26 0.00035 0.049 15.7 0.7 1 23 1837 1860 1837 1860 0.89 22 26 0.016 2.2 10.5 5.4 1 23 1866 1888 1866 1888 0.97 23 26 0.2 28 7.1 0.1 5 21 1894 1910 1891 1911 0.92 24 26 0.0009 0.13 14.4 1.7 1 23 1920 1943 1920 1943 0.94 25 26 0.0039 0.56 12.4 3.0 2 23 1953 1977 1952 1977 0.95 26 26 8.1e-05 0.012 17.7 0.6 2 23 1985 2009 1984 2009 0.95
Sequence Information
- Coding Sequence
- ATGATTGTAGCCATTGAAAGGAAACTTACAGAAGAACACAATTCAATAACCAAGCCATATATGTGCAATAAAGAGGGCTGTAATAAGACATTTGGCCAAGCAAGTGATTTAAAGAGACACTTAAAATTACACGACGTTATAAAACGTCACGAATGTGAAGAACCGAATTGTTATGCAGTTTTTACGCGACTGGAAAAACTACAAATACATAAACTGGTTTACCACTGTGGAGAGCGACCTTTCAAATGCGATTTTACAGGATGTAACAAATCTTATACTTCGGATGTTCATTTAAAGCGTCACAAATACACAAGTCACTCAGATCCAGAACAGGTGATTTGTGGGATTGAAGGCTGTGGGAAAACTTATTGTAACAAATATGTCCTCAAGCAACATATTGCTAGTGCCCACGTCGATCGTGGAAGCATAAAAAATCCGCAGGAATCAATTAAGAAAAAGAGCGATATTGAAAAGAAGCATAAATGCGATGAACCAGGTTGCACAGCTGCGTTCACACGACCCTACCGACTTAAAAATCATAAGTTAACTTTTCACGCTGGAGAAAAACCATTTAAATGTAATCACCAAGGATGTGACAAGAGCTACACCAATGAAGCACATCTAAGAAGACACAAAAGCAGTCACTGTTCAGAAATAGATACTAGCAACGAGGTTATTTGTGGAATGAAAGATTGTGgaagaattttcgcaaataaatatAGTCTTCAAAAACATATCAAAAGAAACCACATTGATCTTCCATATGCCTGTAAAAACTGTGACGAGAAATTCAAACGGAAAAATCAACTTCTCGCTCACAATCTTGAAGAACATAAAGAGGAGACGCCGTACAAATGTGATAAATGCCCCAAAGCGTTTAGCCACTTTAATTTGCTTAACAAACACTCGAAAAATCACAAAACATACCAGTGTGattgtgaaaaaatttttgacAGGTGGTCAAAACTCGTAAAACATAGAAAAACTGATTGTACCGTTCACAAGAAAGAACATAAATGTGTAATTTGTGGAAAAATCTTCAGTTTAAAACGTTCTTTAACTGAACATTCTCTAATGATACACGTACCAGATAGTCAAATTGATATTCTACATTGTCCTTACTTAAATTGCAACTActcttacaaatataaaaataatcttaagcATCATATAAGGACATACcatgagaaaatttttaaaagcatcaAGTGTACCGAGAAAAATTGCGAAAGTATTTTCAAATCAAAGAAGAATTTAAAGCAACATTTAAGGGTCGCGCATTGTGGTCTTCCACCGAAAGTCAGAAAACCTAGGAAATCAAGGAAGGATAAAGGAAAACCTAAAAAGTCTATGGCTTCTAAAATTAGTGGAGTTGAAGTTAGCATTCGAGAGAATTATGAGAATATTGTTGGAAGAAatgatgaaaatttaaaagatgCAGTTTTAAAGATAAATCTAATTCGAATAGATCTATCTAAATGTAAAAATAACGATGAAGCTAATATTATTCGTAAGAGAACTAGAGATGAATTTGAAGAGTGTACGGGTTTAGCTGCGTCTAGTAAACCAAAAAGTAACCATGAAAAtttaaaagacaaaattttaaagGTAGATTTAATTCGTATAGATctatctaaatataaaaataataataaattggagACTGATTGTAAGAAAACTAGGAATGAAGTTATAAATGAAGAAAGTCGTGAAGAAATGAggaaaaataacacaaattacgACCATTTTGAAGAGTGTACGGGTTTAGCTGCGTCTAGTAAACCAAAAAGTAATGATGAacgtttaaaaattcaacatgagGACACATCTGATTCAGCAGTAAGCATAGCATCTGGATGTTCGAAAAAATCACCTAATTTAAGGAAGGATTGTTTGGAAGATCTGTCACAATCAACTGAATTTACTGAAAATTGCGTAGTTCACGAGGTCGGACATATAGAGAAGATAACAATTTCACAAACCTATGAAAGTTGTGGAACAAACCTTTCTAAAGATGATAGAGATAATAACTTTAATATGGAAAGCACAAACGAAAATTTCGAACATGAATCAActgattttattgaaaattgcgaAGATCATGAGGTCGCACATACAGAAAAGATAACAAATTCAGAAACTTATGAAAGTTCTAGCTGTGGGACAAACTTTCCTAAAGATGATACAGATAATAAttttaacacggaaaggacaACCGAAAATTATGAAAATGAATCAACTGATGTTATTGGAAATTGTGAAGATCACGAGGTCCCACATAGAGAAAAGATAACAAATTCAGAAACCTATGAAAGTTCTAGTTTTGAGACAAACCTTCCTAAAGATGATACAGATAATAACTCTAATAGGGAAAGCACaagtgaaaattttgaaaatggatcaactgattttattgaaaattgtgaAGATGACGAGGTCGCACATAGAGAAGAGATAACAAATTCAGAAACCTATGAAAGTTCTAGTTGTGAGACAAACCTTCCTAAAGATGATATAGATAATAACTCTAACAGGGAAAGCATAAatgaaaattgtgaaaatgaatcaactgattttattgaaaattgcgaAGATCATGAGGTCGCACATACAGAAAAGATAACAAATTCAGAGACCTATGAAAGTTCTAGTTGTGGGACAAACCTTCCTAAAGATGATACAGATAGAAACTGTAACAGGGAAAGCACaagtgaaaattttgaaaatgaatcaACTGATTTTATTGAAAACTGTGAAGATCACGAGGTCGTACATAGAGAAAAGATAACAAATTCGGAAATCTATGAAAATTCTAGTTGTGGGACAAACCTTCCTAAAGATGATATAGATGATAACTCTAACAGGGAAAGCGTgaacgaaaattttgaaaatgaatcaactaattttattgaaaattgcgaAGATCATGAGGTCGCACATACAGAAAAAGTAACAAATTCAGAAACCTATGAAAGTTCTAGTTGTGGGACAAACCTTCCTAAAGATGATACAGATAATAACTCTAACATGGAAAGCACAAACGAACAATTTGAAAATGAATCAACTGATTTTCTTAAATATTGTGAAGGTCACGAGGTCGCACGTAGAGAAAAGATAGCAAATTCCGAAACCTATAAAAGTTCTAGTTGTGGGACAAACCTTCCTAAAGATAATACAGATAATAACTCTAAAATGGAAAGCACAagcgaaaagtttgaaaatgaatcaactgattttattgaaaattatgaaGATCACGAGGTCGCACATAGAGAAAAAATAACAGATTCAGAAGCCTATGAAAGTTCTAGTTGTGAGACAAAGCTCGCTAAAGATAATATTGATAATAACTCTAATAGGGAAAGCataaacgaaaattttgaaaatgaatcaactgattttattgaaaattgtgaAGATCACGAGGTCGCACATGGAGAAGAGGCCACAAATTCAGAAACCTATGAAAGTTCTCGTTGTGGGATAAACTTTCCTAAAGATGATATAGATAATAACTCTAACATGGAAAGCACAAACGAACAATTTGGAAATGAATCAACTGATTTCCTTAAACATTGTGAAGGTCACGAGGTCGCACGTAGAGAAAAGATAGCAAATTTAGAAACCTATAAAAGTTCTAGTTGTGGGACAAACCCTCCTAAAAATGATAcagataataactctaaaacggAAAGCACAagcgaaaagtttgaaaatgaatcaactgattttattgaaaattgtgaAGGTCACGAGGTCGCACATAGAGAAAAAATAACAGATTCAGAAGCCTATGAAAGTTCTCGTTGTGGGATAAACTTTCCTAAAGATGATATAGATAATAACTCTAACAGGGAAAGCataaacgaaaattttgaaaataaatcaactgattttattgaaaattgtgaAGGTCACGAGGTCGCACATAGAGAAAAAATAACAGATTCAGAAGCCTATGAAAGTTCTCGTTGTGGGATAAACTTTCCTAAAGATGATACAGATAATAACTGTAATAGGGAAAGCACaagtgaaaattttgaaaatgaatcaACTGATTTTATTGAAGTTTGTGAAGATCACGAGGTCGCACATGGAAAAGAGACCACAAATTCAGAAACCTATGAAAGTTCTCGTTGTGGGACAAACCTTCCCAAAGATGATATAGATAATAACTCTAACAGGGAAAGCataaacgaaaattttgaaaatggatcaactgattttattgaaaattgcgaAGATCATGAGGTTGCACATACAGAAAAGATACCAAATTCAGAAACCTATGAAAGTTTTAGTTGTGAGACAAACCTTCCTAAAGATGATATAGAAAGTAActgtaatagggaaaacaaaaacgaaaaatttgTAAATGAATCAActgattttattgaaaattgcgaAGATCATGAGGTCACAGATAGAGAAAAGATAACAAATTCAGAGACCTATGAAAGTTCTAGTTGTGGGACAAACCTTCCTAAAGATGATACAGATAATATTTCTAACGCGGAAAGCacaaacgaaaattttgaaaatgaatcaactgattttattgaaaattgtgaAGATCACGAGGTCTCACAGAGAGAAAAGATCACAAATCCAGAAATCTATGAAAGTTCTAGTTGTGGGACAAACCTTTCTAAAGATTACAGAGATAACCACTTTAACACGGAGAGCACAAACGAAAATTTCGAAAATGAATCAActgattttattgaaaatttagagAGACAAAACAAGATTGTAGCCATTGAAAGGAAACTTACAGAAGAACACAGTTCAATAACCAAGTCATATATGTGCGAAAAAGAGGGCTGTAATAAAGTATTTGGCCAAGCAAGCAGTTTAAAGACACGCTTAAAATTACACGACGTTATAAAACGTCACGAATGTGAAGAACCGAATTGTCATGCAGTTTTTACGCGACTGGAAAAGCTACAAACACATAAACTGGTTTATCACTCTGGGGAGCGACCTTTCAAATGCGATTTTACAGGATGTAACAAAACTTATACTTCTGATGTCCATTTAAAGCGTCACAAATACACAAATCACTCAGATGCAGAACAGGTGATTTGTGGAGTTAAAGGCTGTGGGAAAACTTATTGTAACAAATATGTCCTCAAACAACATTTAGCTAGTGCTCACGACCATCGTGGAGGCGTAAAAAATCCGCAGGAATCAATTAAGAAAAAGGGCGATATTGAAAAGAAGCATAAATGCGACGAACCAGGTTGCACAGCTGCGTTCACACGTCCCTACCGACTTAAAAGCCATAAGTTAACTTTTCACGCTGGAGAAAAACCATTTAAATGTAACCACCAAGGGTGTAACAAGAGCTACACCAATGAAGCACATCTAAGAAGACACAAAAACACTCACTTTTCAGAAGTAGATACTAGCAACGAGGTTATTTGTGGAATGAAAGATTGTGgaagaattttcgcaaataaatatAGTCTTCAAAAACATATAAAGAGAAACCACATTGATCTTCCATATGCCTGTAAGGATTGTAACGAGAAATTCAAACGGAAAAATCAACTTCTCGCTCACAATCTTGAAGAACATAGAGGAGAGGCGCCGTACAAATGTGATAAATGCCCCAGAGAGTTTAGCCactttaatttgtttaacaaaCATTCGAAAAATCACAAGACATACCAGTGTGattgtgaaaaaatttttgacAGGTGGTCAAAACTCGTAGAACATAGAAAAGCTGATTGTACCGTTCAGAAGAAAGAACATAAATGTGTAATTTGTGGAAAAATGTTCACTTTAAAGCGTTCTTTAACTGAACATTCTTTAAAGATACATCTACCAGATAGTCAAATTGATCTTCTACATTGTCCTTACTTAAATTGTAACTTctcttataaatataaaaataatcttaagtATCATATAAGGACGTACCATGAGAAAATTTTTAAGAACATCAAGTGCACTGAGGAAAATTGTGAAAAGATTTTCAaatcaaataagaatttaaaGCAACATCTAAGGGTCGCGCATTGTGGTCTTCCACCGAAAGTAAGAAAACCTAGGAAACCAAGGAAGGATAAAGGAAAACCTAAAAAGTCTATGGCCTCTAAAATTAGTGGAATCGAAGTTAGCATTCGAGagaattatgaaaatattattggaagaaaagataaaaatttaaaagacaaAGTTTTAAAGGTAAATTTAATTCGTATAGATCTATCCAGATATCAGAATAATGATAAAGTGAAGattaattataagaaaattagGGATGAAGTTACAGATGAGGAAAGTCGTGAAGGAATGAggaaaaataacacaaataacGACCAGTTTAAAGAGTGTGCGGGTTTAGCTGCGTCTGGTAAATCAAAAAGTAAGGATGaatgtttaaaaattcaacatgtgGATACATCTGTCTTAGTAGTAAGCACAGAAATAGTATCTATTTGTTCGAAGAAAACACCCGATATTAGAGCGGATTGTTTAGAAGATCGGTTAGAATCAACTGAGTTTACTGAAAACTGCGAAGATCATGAGGTCGCACATAGAGGAAAGATAAATTCAGAAACCTGTGAAAGTTCTAGTTGTGGGACAAACCTTCTTAAAGATGATAGAGATAATAACTTTAACACAAAAGGCACAAACGAAAGTTTTGAAAATGAATCAACTGATTTTGTTGAGAATTTAGAGAGTTGTttggaagaaataattaataatcagGATGCGAGCAGAGATGATGATAGCAGTAATGTTTTGGTAGTAAACATGGATTTAGATCTCGAGTGTTCAAGAAATCTAGTTGTTATAGAAGAAATATCCTCACAAGTTCAAAGCAGTGAGCTTCAAAAGTCTTTAATCATTGATTCTGGATATAGAGAAGGTACAAATAATTCTGGCCCCGAAACAAGTTTGGAAAGTAGTATCGAGAAGTGTATAGAtgataaaaatatagaaacagaGAATATAGAGATAATAAATGTTAACGAAATGTTGGACTTCAATACTGATATTCTTATGGAAAGTTGTAGTCAAACTAGTTGTGATAGTGGAGTAGTTATATTTGAATTTCCTGAATTTGAAAATATCggtaattgtaataataaattaaatgacgTAAATAGTGAGGAACAAGTGCTCTCTATGGAAGTTCAAGAATGCAGTAATGGTAGTTATATTTCGGacgaaaatttagaaaaagatctGAGGTGA
- Protein Sequence
- MIVAIERKLTEEHNSITKPYMCNKEGCNKTFGQASDLKRHLKLHDVIKRHECEEPNCYAVFTRLEKLQIHKLVYHCGERPFKCDFTGCNKSYTSDVHLKRHKYTSHSDPEQVICGIEGCGKTYCNKYVLKQHIASAHVDRGSIKNPQESIKKKSDIEKKHKCDEPGCTAAFTRPYRLKNHKLTFHAGEKPFKCNHQGCDKSYTNEAHLRRHKSSHCSEIDTSNEVICGMKDCGRIFANKYSLQKHIKRNHIDLPYACKNCDEKFKRKNQLLAHNLEEHKEETPYKCDKCPKAFSHFNLLNKHSKNHKTYQCDCEKIFDRWSKLVKHRKTDCTVHKKEHKCVICGKIFSLKRSLTEHSLMIHVPDSQIDILHCPYLNCNYSYKYKNNLKHHIRTYHEKIFKSIKCTEKNCESIFKSKKNLKQHLRVAHCGLPPKVRKPRKSRKDKGKPKKSMASKISGVEVSIRENYENIVGRNDENLKDAVLKINLIRIDLSKCKNNDEANIIRKRTRDEFEECTGLAASSKPKSNHENLKDKILKVDLIRIDLSKYKNNNKLETDCKKTRNEVINEESREEMRKNNTNYDHFEECTGLAASSKPKSNDERLKIQHEDTSDSAVSIASGCSKKSPNLRKDCLEDLSQSTEFTENCVVHEVGHIEKITISQTYESCGTNLSKDDRDNNFNMESTNENFEHESTDFIENCEDHEVAHTEKITNSETYESSSCGTNFPKDDTDNNFNTERTTENYENESTDVIGNCEDHEVPHREKITNSETYESSSFETNLPKDDTDNNSNRESTSENFENGSTDFIENCEDDEVAHREEITNSETYESSSCETNLPKDDIDNNSNRESINENCENESTDFIENCEDHEVAHTEKITNSETYESSSCGTNLPKDDTDRNCNRESTSENFENESTDFIENCEDHEVVHREKITNSEIYENSSCGTNLPKDDIDDNSNRESVNENFENESTNFIENCEDHEVAHTEKVTNSETYESSSCGTNLPKDDTDNNSNMESTNEQFENESTDFLKYCEGHEVARREKIANSETYKSSSCGTNLPKDNTDNNSKMESTSEKFENESTDFIENYEDHEVAHREKITDSEAYESSSCETKLAKDNIDNNSNRESINENFENESTDFIENCEDHEVAHGEEATNSETYESSRCGINFPKDDIDNNSNMESTNEQFGNESTDFLKHCEGHEVARREKIANLETYKSSSCGTNPPKNDTDNNSKTESTSEKFENESTDFIENCEGHEVAHREKITDSEAYESSRCGINFPKDDIDNNSNRESINENFENKSTDFIENCEGHEVAHREKITDSEAYESSRCGINFPKDDTDNNCNRESTSENFENESTDFIEVCEDHEVAHGKETTNSETYESSRCGTNLPKDDIDNNSNRESINENFENGSTDFIENCEDHEVAHTEKIPNSETYESFSCETNLPKDDIESNCNRENKNEKFVNESTDFIENCEDHEVTDREKITNSETYESSSCGTNLPKDDTDNISNAESTNENFENESTDFIENCEDHEVSQREKITNPEIYESSSCGTNLSKDYRDNHFNTESTNENFENESTDFIENLERQNKIVAIERKLTEEHSSITKSYMCEKEGCNKVFGQASSLKTRLKLHDVIKRHECEEPNCHAVFTRLEKLQTHKLVYHSGERPFKCDFTGCNKTYTSDVHLKRHKYTNHSDAEQVICGVKGCGKTYCNKYVLKQHLASAHDHRGGVKNPQESIKKKGDIEKKHKCDEPGCTAAFTRPYRLKSHKLTFHAGEKPFKCNHQGCNKSYTNEAHLRRHKNTHFSEVDTSNEVICGMKDCGRIFANKYSLQKHIKRNHIDLPYACKDCNEKFKRKNQLLAHNLEEHRGEAPYKCDKCPREFSHFNLFNKHSKNHKTYQCDCEKIFDRWSKLVEHRKADCTVQKKEHKCVICGKMFTLKRSLTEHSLKIHLPDSQIDLLHCPYLNCNFSYKYKNNLKYHIRTYHEKIFKNIKCTEENCEKIFKSNKNLKQHLRVAHCGLPPKVRKPRKPRKDKGKPKKSMASKISGIEVSIRENYENIIGRKDKNLKDKVLKVNLIRIDLSRYQNNDKVKINYKKIRDEVTDEESREGMRKNNTNNDQFKECAGLAASGKSKSKDECLKIQHVDTSVLVVSTEIVSICSKKTPDIRADCLEDRLESTEFTENCEDHEVAHRGKINSETCESSSCGTNLLKDDRDNNFNTKGTNESFENESTDFVENLESCLEEIINNQDASRDDDSSNVLVVNMDLDLECSRNLVVIEEISSQVQSSELQKSLIIDSGYREGTNNSGPETSLESSIEKCIDDKNIETENIEIINVNEMLDFNTDILMESCSQTSCDSGVVIFEFPEFENIGNCNNKLNDVNSEEQVLSMEVQECSNGSYISDENLEKDLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -