Dabb030313.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- ZBTB41
- Assembly
- GCA_034092305.1
- Location
- JASJET010000118.1:749481-762574[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 2.1 2.9e+02 3.9 0.2 1 21 195 215 195 216 0.94 2 23 0.12 17 7.8 1.3 1 23 223 246 223 246 0.87 3 23 0.027 3.8 9.8 5.0 2 23 387 408 387 408 0.96 4 23 3.4e-05 0.0049 18.9 1.8 2 23 415 437 414 437 0.96 5 23 0.00012 0.017 17.2 5.0 1 23 444 466 444 466 0.98 6 23 0.0003 0.042 16.0 0.2 2 23 473 495 472 495 0.96 7 23 7e-05 0.01 17.9 3.9 2 23 503 524 502 524 0.96 8 23 0.00032 0.046 15.8 2.5 1 23 533 556 533 556 0.94 9 23 0.0023 0.33 13.2 0.5 1 23 563 585 563 585 0.97 10 23 2.5e-05 0.0036 19.3 2.8 2 23 592 613 591 613 0.97 11 23 3.1e-07 4.3e-05 25.4 3.2 1 23 619 641 619 641 0.98 12 23 0.0077 1.1 11.5 0.9 1 23 647 670 647 670 0.97 13 23 0.064 9 8.6 2.3 3 22 703 722 701 725 0.88 14 23 0.13 18 7.6 2.5 2 21 752 771 751 774 0.94 15 23 8.1e-06 0.0012 20.9 1.2 1 23 780 802 780 802 0.96 16 23 0.0065 0.93 11.7 0.5 2 23 808 829 807 829 0.97 17 23 0.0017 0.24 13.6 1.3 2 23 836 858 836 858 0.96 18 23 3.7e-05 0.0053 18.8 2.4 1 23 863 885 863 885 0.95 19 23 1.7e-05 0.0024 19.8 0.6 2 23 895 917 894 917 0.96 20 23 0.015 2.1 10.6 3.5 1 23 924 946 924 946 0.96 21 23 0.00011 0.015 17.4 2.0 2 23 953 974 952 974 0.97 22 23 4.3e-06 0.00062 21.7 0.9 1 23 980 1003 980 1003 0.95 23 23 0.0067 0.95 11.7 0.4 1 23 1009 1032 1009 1032 0.94
Sequence Information
- Coding Sequence
- ATGAAATGCGAATTTGAAGATGATCCCTTACATATTTCTGATGAAGAAAAAACTGTTATGATCACATCtttgaaacaaatattaaatgaagaagaaaaagatgtGTTGATACTAACCCCAAAGGATGAATATAAAAGTTTGGATAATTGGTTGTCGAAAAATCCTTTGaatacaaatttatttcttcaaaaagaTGTAACGGTAGATACACTTTCTCATCCTGAAATAAAAAGTCGAACTAGACGTAAAAAAGCTAATCTAAATATAGTAGAAATAAATAAGCCAAGATCTACCAAGACTAATAAGAAAACTTCCAAATCTTCTTATGTAAGTAAAAGTAAAGCTATATTAtcagaaaaatcgaaaaattctgAATTTACATTTGGAAATCCATCCCAAAAAgatgttgatttttttaatacatttgaaTCAGAAGTTAACAAGAAATTACCTGAAAAAAGTCTACTAAGTCGACGTCTTTCGCCTACAGATATATCCACTTCTATGATAGCTGACATAAAATATTCCAAAGATAGTGAAGATACTGgagatttaatttatatacaacCTTTTAACCCACCTTTTAAATGTTCAGTTTGTATTTtggattttgattattttaatgaCTTGGAAAATCATCTACAAAGTTCTAAAGCtggtcatttttttaaatgtcaatacTGTCAGGAAGTTTTCGGAGATTATAATCAGTTTTATGGACATTTTATTCAAGAGCATACGAATGTAACTAAAGGTGCAATGTGTGATAAAATAAAGGAGATGTTAAAGGAAGGAAATACCACACGTCAAATAGCTTCAGTATTAAAAGTGAGTCAAAGCAGAGTTCAAAGAATTAGAAAAGAGTGTGGaagcagtttaaaaaaaaatgtcggcGGTCGGCCAAAGAAGTTGAGTCCTAGAGACAgtagaaatataattagatacatGGCTACTGGAGAAGCTTTATCTCCGTCTCAGGCGGCTAAAATTCTTCAACGGGATACTGGAAAATTAATTAGTAGGTGGACGGTACAAAGATCAATCGATACGCAACTGATGGTCGCCAATGCAAATAGAAAACAAACGGTGATCCAATTCGACTTTCTCAAACTGGAATTTTCTGAAGGCGATTCTCCAAAAACAAGTGCGAATATACCCACATGCTCATATTGCCAAAAGAGGTGTAAAAATATGTGGTTTTTAAAAAAGCACATGGTCAATCACCGGGAGGAGCGGCCTTGGAAGTGTTCAACTTGTACCAAGTCGTTCAAAAAATACAGCGATATGCAAAAGCACATCAAAGTTATTCATCAAGAGGGAGGAAAAAAATTCTATTGCAACCAGTGTACGAAAGTTTTTAAAACCAAGCACGGCTTTTTAGATCACATGAATagacatgaaaaaaattttgttgttacTTGTGAGCTTTGCGGAAAAGGCTACGTGACTAAACAAGAATATGAAATCCATATAAAGAAAAAACACGATGATAATCGTGAAATTTTGATTTGCTTTATCTGCGGTAGGTCATGTTGCGACAAATATTCCTTAACTGCCCATCTTAAAACTCACGAAGAAGGATATCACGATGAAAAGTACGCCTGTGAACACTGTGGAAAGAAATTTGCTCAAAAGCGAGGTCTTGACCACCACTACGTTAGAATACATAAAGATGGCGGTGTAAAATTTGTTTGTAATCTTTGTGGTAAAGAAGTGCACTCTAAAATAAGTCTCCGAGGTCATATGTTACTCCACGAAGGGGCAAAACCTTTGCAGTGTCCTCACTGTGAGAAATGTTTTGCTCTCGCTAGTACGCTGAGAACCCATCTTCtaactcatacaggtgaaagaccGCATAAATGTGAAGAATGTGGTAAATGCTTTACTCAGAGAGGACCTTTAAAAGCTCATATTCGAACTCATACTGGAGAAACACCTTATAAATGTGACATTTGCTCTAGTGCTTTTGTTACTAAGGCTCTATTGACATTTCATATAAAGAAAAAGCATAACACTgtattttttatgaatattgatcaGGTCGGAGAGGAGAACAAACCAAACCTAGTTGATATTTTAGGTCAGCCAGTGATATATCCACTTGCTTGCACTGTATGCTGCAAAACATTCGATACTTTGAGTAGTCTACAAAACCACAAGGACACATTTATGCACGTTGAAGAAAATTGTTTCTATAAAACTAATTCCGAAGCACATTCTCCTATTAAAGAATTAGGAAAACCGGAAGTCACTGTTTGTGACTTATGTCAAAAAAAGTTTCCGTCTACCAGGCGACTGAAAATGCATATAAAATGCGTACATACTGAAGATCGTCCATACTTGTGTACGTATTGTCCAAAAAGCTATAAAACCAAAAATGCGTTAACACAACATTTAGAAACGCATACAAGAACTTTATTAAAATGTGACGTTTGTTCAAAATTATTAGGTAACAAGAATACTTTGGAAATACACATGAAAAGACATAATCAAGAATACATCGCCAAATGTGAACACTGCGAGATGAAATTTGTTTCAGTGTACGAACTGAAAACCCACATTTCCGTCAGACACAGTGAAAGAACTTTTTTGTGTTCGCAATGTGGACAGGAATTTTCcagtaaaaatactttaaaatatcacATGAAACGGCACGATCCCAATTTTAAAAGGGGCAGTATCAAGTGTAGTTACTGTGATAAAGTTTTTGACATCGAAAGAAACCTTAAACGTCATGTTAGAGTGCGGCATAACAATTTCAGGAAAGAATACTGTTGCGACCTTTGTGGCAAAGTTTTGACTTCATCGGATGGTTTCAAGTTGCACAAGTTGCATCATCAAGGAGAAAAACCATTAGAATGCGAGCAGTGCGGAAAAAGGTTTTTGAGGAAAGCTACTTTAAAGTGGCATATGCACACTCATACTGGTGAAAAACCTCATAAATGCAGTTTTTGTGAACAAGCCTTTACCCAACCAAGCGCCTTAAAGAGACACATGATGGGAGTTCATGCGTTGACATGTCCATTTATATGCACAATCTGTGAGGATAGTTTTTCCAATAAGATTTTATTAAATGATCATACCAAAGCCAAACATCCTGAATCTCTTAAATAG
- Protein Sequence
- MKCEFEDDPLHISDEEKTVMITSLKQILNEEEKDVLILTPKDEYKSLDNWLSKNPLNTNLFLQKDVTVDTLSHPEIKSRTRRKKANLNIVEINKPRSTKTNKKTSKSSYVSKSKAILSEKSKNSEFTFGNPSQKDVDFFNTFESEVNKKLPEKSLLSRRLSPTDISTSMIADIKYSKDSEDTGDLIYIQPFNPPFKCSVCILDFDYFNDLENHLQSSKAGHFFKCQYCQEVFGDYNQFYGHFIQEHTNVTKGAMCDKIKEMLKEGNTTRQIASVLKVSQSRVQRIRKECGSSLKKNVGGRPKKLSPRDSRNIIRYMATGEALSPSQAAKILQRDTGKLISRWTVQRSIDTQLMVANANRKQTVIQFDFLKLEFSEGDSPKTSANIPTCSYCQKRCKNMWFLKKHMVNHREERPWKCSTCTKSFKKYSDMQKHIKVIHQEGGKKFYCNQCTKVFKTKHGFLDHMNRHEKNFVVTCELCGKGYVTKQEYEIHIKKKHDDNREILICFICGRSCCDKYSLTAHLKTHEEGYHDEKYACEHCGKKFAQKRGLDHHYVRIHKDGGVKFVCNLCGKEVHSKISLRGHMLLHEGAKPLQCPHCEKCFALASTLRTHLLTHTGERPHKCEECGKCFTQRGPLKAHIRTHTGETPYKCDICSSAFVTKALLTFHIKKKHNTVFFMNIDQVGEENKPNLVDILGQPVIYPLACTVCCKTFDTLSSLQNHKDTFMHVEENCFYKTNSEAHSPIKELGKPEVTVCDLCQKKFPSTRRLKMHIKCVHTEDRPYLCTYCPKSYKTKNALTQHLETHTRTLLKCDVCSKLLGNKNTLEIHMKRHNQEYIAKCEHCEMKFVSVYELKTHISVRHSERTFLCSQCGQEFSSKNTLKYHMKRHDPNFKRGSIKCSYCDKVFDIERNLKRHVRVRHNNFRKEYCCDLCGKVLTSSDGFKLHKLHHQGEKPLECEQCGKRFLRKATLKWHMHTHTGEKPHKCSFCEQAFTQPSALKRHMMGVHALTCPFICTICEDSFSNKILLNDHTKAKHPESLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -